data_6BXR # _model_server_result.job_id clLC2y5Xnht3lG5jlzqxmA _model_server_result.datetime_utc '2024-11-05 05:37:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":515}' # _entry.id 6BXR # _exptl.entry_id 6BXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BXR _cell.length_a 45.09 _cell.length_b 62.11 _cell.length_c 89.21 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 P N N ? 4 Q N N ? 4 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 M NA NA . A NA 512 1_555 S O HOH . A HOH 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.167 ? metalc ? metalc2 M NA NA . A NA 512 1_555 S O HOH . A HOH 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.173 ? metalc ? metalc3 N NA NA . A NA 513 1_555 S O HOH . A HOH 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? metalc ? metalc4 N NA NA . A NA 513 1_555 S O HOH . A HOH 825 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc5 O NA NA . A NA 514 1_555 S O HOH . A HOH 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6BXR _atom_sites.fract_transf_matrix[1][1] 0.022178 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0161 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01121 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BR A 1 501 1 BR BR . C 2 BR A 1 502 2 BR BR . D 2 BR A 1 503 3 BR BR . E 2 BR A 1 504 4 BR BR . F 2 BR A 1 505 5 BR BR . G 2 BR A 1 506 6 BR BR . H 2 BR A 1 507 7 BR BR . I 2 BR A 1 508 8 BR BR . J 2 BR A 1 509 9 BR BR . K 2 BR A 1 510 10 BR BR . L 2 BR A 1 511 11 BR BR . M 3 NA A 1 512 1 NA NA . N 3 NA A 1 513 2 NA NA . O 3 NA A 1 514 4 NA NA . P 4 GOL A 1 515 1 GOL GOL . Q 4 GOL A 1 516 1 GOL GOL . R 4 GOL A 1 517 1 GOL GOL . S 5 HOH A 1 601 238 HOH HOH . S 5 HOH A 2 602 127 HOH HOH . S 5 HOH A 3 603 234 HOH HOH . S 5 HOH A 4 604 275 HOH HOH . S 5 HOH A 5 605 274 HOH HOH . S 5 HOH A 6 606 184 HOH HOH . S 5 HOH A 7 607 157 HOH HOH . S 5 HOH A 8 608 136 HOH HOH . S 5 HOH A 9 609 161 HOH HOH . S 5 HOH A 10 610 197 HOH HOH . S 5 HOH A 11 611 130 HOH HOH . S 5 HOH A 12 612 165 HOH HOH . S 5 HOH A 13 613 235 HOH HOH . S 5 HOH A 14 614 240 HOH HOH . S 5 HOH A 15 615 83 HOH HOH . S 5 HOH A 16 616 244 HOH HOH . S 5 HOH A 17 617 85 HOH HOH . S 5 HOH A 18 618 156 HOH HOH . S 5 HOH A 19 619 40 HOH HOH . S 5 HOH A 20 620 99 HOH HOH . S 5 HOH A 21 621 125 HOH HOH . S 5 HOH A 22 622 162 HOH HOH . S 5 HOH A 23 623 76 HOH HOH . S 5 HOH A 24 624 105 HOH HOH . S 5 HOH A 25 625 73 HOH HOH . S 5 HOH A 26 626 74 HOH HOH . S 5 HOH A 27 627 28 HOH HOH . S 5 HOH A 28 628 78 HOH HOH . S 5 HOH A 29 629 10 HOH HOH . S 5 HOH A 30 630 26 HOH HOH . S 5 HOH A 31 631 246 HOH HOH . S 5 HOH A 32 632 260 HOH HOH . S 5 HOH A 33 633 45 HOH HOH . S 5 HOH A 34 634 264 HOH HOH . S 5 HOH A 35 635 111 HOH HOH . S 5 HOH A 36 636 159 HOH HOH . S 5 HOH A 37 637 33 HOH HOH . S 5 HOH A 38 638 39 HOH HOH . S 5 HOH A 39 639 98 HOH HOH . S 5 HOH A 40 640 103 HOH HOH . S 5 HOH A 41 641 65 HOH HOH . S 5 HOH A 42 642 169 HOH HOH . S 5 HOH A 43 643 119 HOH HOH . S 5 HOH A 44 644 245 HOH HOH . S 5 HOH A 45 645 42 HOH HOH . S 5 HOH A 46 646 141 HOH HOH . S 5 HOH A 47 647 128 HOH HOH . S 5 HOH A 48 648 59 HOH HOH . S 5 HOH A 49 649 106 HOH HOH . S 5 HOH A 50 650 251 HOH HOH . S 5 HOH A 51 651 56 HOH HOH . S 5 HOH A 52 652 66 HOH HOH . S 5 HOH A 53 653 134 HOH HOH . S 5 HOH A 54 654 133 HOH HOH . S 5 HOH A 55 655 126 HOH HOH . S 5 HOH A 56 656 32 HOH HOH . S 5 HOH A 57 657 81 HOH HOH . S 5 HOH A 58 658 9 HOH HOH . S 5 HOH A 59 659 97 HOH HOH . S 5 HOH A 60 660 150 HOH HOH . S 5 HOH A 61 661 38 HOH HOH . S 5 HOH A 62 662 67 HOH HOH . S 5 HOH A 63 663 84 HOH HOH . S 5 HOH A 64 664 145 HOH HOH . S 5 HOH A 65 665 187 HOH HOH . S 5 HOH A 66 666 257 HOH HOH . S 5 HOH A 67 667 107 HOH HOH . S 5 HOH A 68 668 4 HOH HOH . S 5 HOH A 69 669 148 HOH HOH . S 5 HOH A 70 670 51 HOH HOH . S 5 HOH A 71 671 23 HOH HOH . S 5 HOH A 72 672 36 HOH HOH . S 5 HOH A 73 673 110 HOH HOH . S 5 HOH A 74 674 173 HOH HOH . S 5 HOH A 75 675 3 HOH HOH . S 5 HOH A 76 676 61 HOH HOH . S 5 HOH A 77 677 82 HOH HOH . S 5 HOH A 78 678 79 HOH HOH . S 5 HOH A 79 679 14 HOH HOH . S 5 HOH A 80 680 68 HOH HOH . S 5 HOH A 81 681 5 HOH HOH . S 5 HOH A 82 682 137 HOH HOH . S 5 HOH A 83 683 89 HOH HOH . S 5 HOH A 84 684 52 HOH HOH . S 5 HOH A 85 685 60 HOH HOH . S 5 HOH A 86 686 239 HOH HOH . S 5 HOH A 87 687 155 HOH HOH . S 5 HOH A 88 688 29 HOH HOH . S 5 HOH A 89 689 62 HOH HOH . S 5 HOH A 90 690 144 HOH HOH . S 5 HOH A 91 691 213 HOH HOH . S 5 HOH A 92 692 229 HOH HOH . S 5 HOH A 93 693 63 HOH HOH . S 5 HOH A 94 694 228 HOH HOH . S 5 HOH A 95 695 90 HOH HOH . S 5 HOH A 96 696 172 HOH HOH . S 5 HOH A 97 697 189 HOH HOH . S 5 HOH A 98 698 96 HOH HOH . S 5 HOH A 99 699 18 HOH HOH . S 5 HOH A 100 700 153 HOH HOH . S 5 HOH A 101 701 57 HOH HOH . S 5 HOH A 102 702 218 HOH HOH . S 5 HOH A 103 703 31 HOH HOH . S 5 HOH A 104 704 88 HOH HOH . S 5 HOH A 105 705 30 HOH HOH . S 5 HOH A 106 706 237 HOH HOH . S 5 HOH A 107 707 50 HOH HOH . S 5 HOH A 108 708 34 HOH HOH . S 5 HOH A 109 709 120 HOH HOH . S 5 HOH A 110 710 223 HOH HOH . S 5 HOH A 111 711 250 HOH HOH . S 5 HOH A 112 712 87 HOH HOH . S 5 HOH A 113 713 24 HOH HOH . S 5 HOH A 114 714 53 HOH HOH . S 5 HOH A 115 715 116 HOH HOH . S 5 HOH A 116 716 75 HOH HOH . S 5 HOH A 117 717 269 HOH HOH . S 5 HOH A 118 718 37 HOH HOH . S 5 HOH A 119 719 25 HOH HOH . S 5 HOH A 120 720 95 HOH HOH . S 5 HOH A 121 721 48 HOH HOH . S 5 HOH A 122 722 12 HOH HOH . S 5 HOH A 123 723 27 HOH HOH . S 5 HOH A 124 724 86 HOH HOH . S 5 HOH A 125 725 132 HOH HOH . S 5 HOH A 126 726 167 HOH HOH . S 5 HOH A 127 727 22 HOH HOH . S 5 HOH A 128 728 58 HOH HOH . S 5 HOH A 129 729 123 HOH HOH . S 5 HOH A 130 730 72 HOH HOH . S 5 HOH A 131 731 118 HOH HOH . S 5 HOH A 132 732 261 HOH HOH . S 5 HOH A 133 733 140 HOH HOH . S 5 HOH A 134 734 142 HOH HOH . S 5 HOH A 135 735 117 HOH HOH . S 5 HOH A 136 736 138 HOH HOH . S 5 HOH A 137 737 92 HOH HOH . S 5 HOH A 138 738 272 HOH HOH . S 5 HOH A 139 739 158 HOH HOH . S 5 HOH A 140 740 13 HOH HOH . S 5 HOH A 141 741 104 HOH HOH . S 5 HOH A 142 742 152 HOH HOH . S 5 HOH A 143 743 253 HOH HOH . S 5 HOH A 144 744 121 HOH HOH . S 5 HOH A 145 745 216 HOH HOH . S 5 HOH A 146 746 46 HOH HOH . S 5 HOH A 147 747 163 HOH HOH . S 5 HOH A 148 748 20 HOH HOH . S 5 HOH A 149 749 256 HOH HOH . S 5 HOH A 150 750 55 HOH HOH . S 5 HOH A 151 751 236 HOH HOH . S 5 HOH A 152 752 170 HOH HOH . S 5 HOH A 153 753 70 HOH HOH . S 5 HOH A 154 754 232 HOH HOH . S 5 HOH A 155 755 101 HOH HOH . S 5 HOH A 156 756 93 HOH HOH . S 5 HOH A 157 757 249 HOH HOH . S 5 HOH A 158 758 221 HOH HOH . S 5 HOH A 159 759 77 HOH HOH . S 5 HOH A 160 760 17 HOH HOH . S 5 HOH A 161 761 7 HOH HOH . S 5 HOH A 162 762 146 HOH HOH . S 5 HOH A 163 763 220 HOH HOH . S 5 HOH A 164 764 41 HOH HOH . S 5 HOH A 165 765 166 HOH HOH . S 5 HOH A 166 766 263 HOH HOH . S 5 HOH A 167 767 124 HOH HOH . S 5 HOH A 168 768 147 HOH HOH . S 5 HOH A 169 769 94 HOH HOH . S 5 HOH A 170 770 71 HOH HOH . S 5 HOH A 171 771 35 HOH HOH . S 5 HOH A 172 772 19 HOH HOH . S 5 HOH A 173 773 43 HOH HOH . S 5 HOH A 174 774 164 HOH HOH . S 5 HOH A 175 775 219 HOH HOH . S 5 HOH A 176 776 209 HOH HOH . S 5 HOH A 177 777 114 HOH HOH . S 5 HOH A 178 778 69 HOH HOH . S 5 HOH A 179 779 102 HOH HOH . S 5 HOH A 180 780 6 HOH HOH . S 5 HOH A 181 781 2 HOH HOH . S 5 HOH A 182 782 80 HOH HOH . S 5 HOH A 183 783 21 HOH HOH . S 5 HOH A 184 784 262 HOH HOH . S 5 HOH A 185 785 212 HOH HOH . S 5 HOH A 186 786 54 HOH HOH . S 5 HOH A 187 787 183 HOH HOH . S 5 HOH A 188 788 199 HOH HOH . S 5 HOH A 189 789 100 HOH HOH . S 5 HOH A 190 790 226 HOH HOH . S 5 HOH A 191 791 190 HOH HOH . S 5 HOH A 192 792 64 HOH HOH . S 5 HOH A 193 793 185 HOH HOH . S 5 HOH A 194 794 11 HOH HOH . S 5 HOH A 195 795 194 HOH HOH . S 5 HOH A 196 796 214 HOH HOH . S 5 HOH A 197 797 179 HOH HOH . S 5 HOH A 198 798 113 HOH HOH . S 5 HOH A 199 799 108 HOH HOH . S 5 HOH A 200 800 44 HOH HOH . S 5 HOH A 201 801 151 HOH HOH . S 5 HOH A 202 802 231 HOH HOH . S 5 HOH A 203 803 16 HOH HOH . S 5 HOH A 204 804 181 HOH HOH . S 5 HOH A 205 805 258 HOH HOH . S 5 HOH A 206 806 203 HOH HOH . S 5 HOH A 207 807 210 HOH HOH . S 5 HOH A 208 808 215 HOH HOH . S 5 HOH A 209 809 149 HOH HOH . S 5 HOH A 210 810 195 HOH HOH . S 5 HOH A 211 811 243 HOH HOH . S 5 HOH A 212 812 259 HOH HOH . S 5 HOH A 213 813 248 HOH HOH . S 5 HOH A 214 814 247 HOH HOH . S 5 HOH A 215 815 188 HOH HOH . S 5 HOH A 216 816 154 HOH HOH . S 5 HOH A 217 817 177 HOH HOH . S 5 HOH A 218 818 115 HOH HOH . S 5 HOH A 219 819 186 HOH HOH . S 5 HOH A 220 820 271 HOH HOH . S 5 HOH A 221 821 180 HOH HOH . S 5 HOH A 222 822 206 HOH HOH . S 5 HOH A 223 823 129 HOH HOH . S 5 HOH A 224 824 267 HOH HOH . S 5 HOH A 225 825 139 HOH HOH . S 5 HOH A 226 826 143 HOH HOH . S 5 HOH A 227 827 217 HOH HOH . S 5 HOH A 228 828 109 HOH HOH . S 5 HOH A 229 829 211 HOH HOH . S 5 HOH A 230 830 8 HOH HOH . S 5 HOH A 231 831 182 HOH HOH . S 5 HOH A 232 832 200 HOH HOH . S 5 HOH A 233 833 266 HOH HOH . S 5 HOH A 234 834 168 HOH HOH . S 5 HOH A 235 835 255 HOH HOH . S 5 HOH A 236 836 241 HOH HOH . S 5 HOH A 237 837 198 HOH HOH . S 5 HOH A 238 838 224 HOH HOH . S 5 HOH A 239 839 49 HOH HOH . S 5 HOH A 240 840 201 HOH HOH . S 5 HOH A 241 841 91 HOH HOH . S 5 HOH A 242 842 131 HOH HOH . S 5 HOH A 243 843 254 HOH HOH . S 5 HOH A 244 844 270 HOH HOH . S 5 HOH A 245 845 202 HOH HOH . S 5 HOH A 246 846 225 HOH HOH . S 5 HOH A 247 847 196 HOH HOH . S 5 HOH A 248 848 222 HOH HOH . S 5 HOH A 249 849 242 HOH HOH . S 5 HOH A 250 850 233 HOH HOH . S 5 HOH A 251 851 273 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . P 4 3.211 9.408 -7.07 1 14.44 ? C1 GOL 515 A 1 HETATM 2 O O1 GOL . . . P 4 3.378 10.162 -8.251 1 12.35 ? O1 GOL 515 A 1 HETATM 3 C C2 GOL . . . P 4 4.002 8.109 -7.117 1 21.48 ? C2 GOL 515 A 1 HETATM 4 O O2 GOL . . . P 4 4.061 7.51 -5.838 1 18.89 ? O2 GOL 515 A 1 HETATM 5 C C3 GOL . . . P 4 5.405 8.355 -7.648 1 14.35 ? C3 GOL 515 A 1 HETATM 6 O O3 GOL . . . P 4 6.202 7.206 -7.444 1 24.52 ? O3 GOL 515 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #