data_6BXY # _model_server_result.job_id 06A1Ix9nhE3aiAJ9ie2u5A _model_server_result.datetime_utc '2024-12-12 14:35:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bxy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 6BXY # _exptl.entry_id 6BXY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BXY _cell.length_a 47.319 _cell.length_b 80.539 _cell.length_c 122.341 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BXY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6BXY _atom_sites.fract_transf_matrix[1][1] 0.021133 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012416 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008174 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EEV A 1 601 1 EEV DRG . C 3 DMS A 1 602 602 DMS DMS . D 3 DMS A 1 603 603 DMS DMS . E 3 DMS A 1 604 604 DMS DMS . F 4 PG4 A 1 605 603 PG4 PG4 . G 4 PG4 A 1 606 604 PG4 PG4 . H 5 SO4 A 1 607 605 SO4 SO4 . I 5 SO4 A 1 608 606 SO4 SO4 . J 5 SO4 A 1 609 607 SO4 SO4 . K 6 EDO A 1 610 609 EDO EDO . L 7 HOH A 1 701 36 HOH HOH . L 7 HOH A 2 702 282 HOH HOH . L 7 HOH A 3 703 161 HOH HOH . L 7 HOH A 4 704 225 HOH HOH . L 7 HOH A 5 705 100 HOH HOH . L 7 HOH A 6 706 209 HOH HOH . L 7 HOH A 7 707 31 HOH HOH . L 7 HOH A 8 708 76 HOH HOH . L 7 HOH A 9 709 181 HOH HOH . L 7 HOH A 10 710 104 HOH HOH . L 7 HOH A 11 711 52 HOH HOH . L 7 HOH A 12 712 269 HOH HOH . L 7 HOH A 13 713 277 HOH HOH . L 7 HOH A 14 714 110 HOH HOH . L 7 HOH A 15 715 287 HOH HOH . L 7 HOH A 16 716 142 HOH HOH . L 7 HOH A 17 717 214 HOH HOH . L 7 HOH A 18 718 179 HOH HOH . L 7 HOH A 19 719 72 HOH HOH . L 7 HOH A 20 720 288 HOH HOH . L 7 HOH A 21 721 228 HOH HOH . L 7 HOH A 22 722 238 HOH HOH . L 7 HOH A 23 723 69 HOH HOH . L 7 HOH A 24 724 89 HOH HOH . L 7 HOH A 25 725 16 HOH HOH . L 7 HOH A 26 726 260 HOH HOH . L 7 HOH A 27 727 241 HOH HOH . L 7 HOH A 28 728 70 HOH HOH . L 7 HOH A 29 729 118 HOH HOH . L 7 HOH A 30 730 20 HOH HOH . L 7 HOH A 31 731 215 HOH HOH . L 7 HOH A 32 732 35 HOH HOH . L 7 HOH A 33 733 117 HOH HOH . L 7 HOH A 34 734 168 HOH HOH . L 7 HOH A 35 735 218 HOH HOH . L 7 HOH A 36 736 55 HOH HOH . L 7 HOH A 37 737 91 HOH HOH . L 7 HOH A 38 738 105 HOH HOH . L 7 HOH A 39 739 124 HOH HOH . L 7 HOH A 40 740 87 HOH HOH . L 7 HOH A 41 741 220 HOH HOH . L 7 HOH A 42 742 18 HOH HOH . L 7 HOH A 43 743 113 HOH HOH . L 7 HOH A 44 744 116 HOH HOH . L 7 HOH A 45 745 102 HOH HOH . L 7 HOH A 46 746 13 HOH HOH . L 7 HOH A 47 747 245 HOH HOH . L 7 HOH A 48 748 46 HOH HOH . L 7 HOH A 49 749 152 HOH HOH . L 7 HOH A 50 750 158 HOH HOH . L 7 HOH A 51 751 48 HOH HOH . L 7 HOH A 52 752 256 HOH HOH . L 7 HOH A 53 753 109 HOH HOH . L 7 HOH A 54 754 44 HOH HOH . L 7 HOH A 55 755 67 HOH HOH . L 7 HOH A 56 756 6 HOH HOH . L 7 HOH A 57 757 194 HOH HOH . L 7 HOH A 58 758 21 HOH HOH . L 7 HOH A 59 759 164 HOH HOH . L 7 HOH A 60 760 186 HOH HOH . L 7 HOH A 61 761 10 HOH HOH . L 7 HOH A 62 762 33 HOH HOH . L 7 HOH A 63 763 28 HOH HOH . L 7 HOH A 64 764 32 HOH HOH . L 7 HOH A 65 765 12 HOH HOH . L 7 HOH A 66 766 7 HOH HOH . L 7 HOH A 67 767 107 HOH HOH . L 7 HOH A 68 768 66 HOH HOH . L 7 HOH A 69 769 80 HOH HOH . L 7 HOH A 70 770 283 HOH HOH . L 7 HOH A 71 771 135 HOH HOH . L 7 HOH A 72 772 240 HOH HOH . L 7 HOH A 73 773 93 HOH HOH . L 7 HOH A 74 774 26 HOH HOH . L 7 HOH A 75 775 123 HOH HOH . L 7 HOH A 76 776 136 HOH HOH . L 7 HOH A 77 777 237 HOH HOH . L 7 HOH A 78 778 19 HOH HOH . L 7 HOH A 79 779 58 HOH HOH . L 7 HOH A 80 780 213 HOH HOH . L 7 HOH A 81 781 132 HOH HOH . L 7 HOH A 82 782 234 HOH HOH . L 7 HOH A 83 783 224 HOH HOH . L 7 HOH A 84 784 43 HOH HOH . L 7 HOH A 85 785 210 HOH HOH . L 7 HOH A 86 786 193 HOH HOH . L 7 HOH A 87 787 167 HOH HOH . L 7 HOH A 88 788 129 HOH HOH . L 7 HOH A 89 789 83 HOH HOH . L 7 HOH A 90 790 9 HOH HOH . L 7 HOH A 91 791 121 HOH HOH . L 7 HOH A 92 792 149 HOH HOH . L 7 HOH A 93 793 17 HOH HOH . L 7 HOH A 94 794 184 HOH HOH . L 7 HOH A 95 795 38 HOH HOH . L 7 HOH A 96 796 74 HOH HOH . L 7 HOH A 97 797 3 HOH HOH . L 7 HOH A 98 798 148 HOH HOH . L 7 HOH A 99 799 86 HOH HOH . L 7 HOH A 100 800 227 HOH HOH . L 7 HOH A 101 801 47 HOH HOH . L 7 HOH A 102 802 65 HOH HOH . L 7 HOH A 103 803 221 HOH HOH . L 7 HOH A 104 804 30 HOH HOH . L 7 HOH A 105 805 53 HOH HOH . L 7 HOH A 106 806 71 HOH HOH . L 7 HOH A 107 807 79 HOH HOH . L 7 HOH A 108 808 82 HOH HOH . L 7 HOH A 109 809 94 HOH HOH . L 7 HOH A 110 810 232 HOH HOH . L 7 HOH A 111 811 1 HOH HOH . L 7 HOH A 112 812 90 HOH HOH . L 7 HOH A 113 813 64 HOH HOH . L 7 HOH A 114 814 42 HOH HOH . L 7 HOH A 115 815 11 HOH HOH . L 7 HOH A 116 816 252 HOH HOH . L 7 HOH A 117 817 40 HOH HOH . L 7 HOH A 118 818 285 HOH HOH . L 7 HOH A 119 819 25 HOH HOH . L 7 HOH A 120 820 230 HOH HOH . L 7 HOH A 121 821 180 HOH HOH . L 7 HOH A 122 822 191 HOH HOH . L 7 HOH A 123 823 139 HOH HOH . L 7 HOH A 124 824 49 HOH HOH . L 7 HOH A 125 825 103 HOH HOH . L 7 HOH A 126 826 95 HOH HOH . L 7 HOH A 127 827 246 HOH HOH . L 7 HOH A 128 828 112 HOH HOH . L 7 HOH A 129 829 23 HOH HOH . L 7 HOH A 130 830 8 HOH HOH . L 7 HOH A 131 831 197 HOH HOH . L 7 HOH A 132 832 174 HOH HOH . L 7 HOH A 133 833 160 HOH HOH . L 7 HOH A 134 834 97 HOH HOH . L 7 HOH A 135 835 217 HOH HOH . L 7 HOH A 136 836 29 HOH HOH . L 7 HOH A 137 837 14 HOH HOH . L 7 HOH A 138 838 145 HOH HOH . L 7 HOH A 139 839 27 HOH HOH . L 7 HOH A 140 840 106 HOH HOH . L 7 HOH A 141 841 281 HOH HOH . L 7 HOH A 142 842 34 HOH HOH . L 7 HOH A 143 843 37 HOH HOH . L 7 HOH A 144 844 39 HOH HOH . L 7 HOH A 145 845 51 HOH HOH . L 7 HOH A 146 846 50 HOH HOH . L 7 HOH A 147 847 45 HOH HOH . L 7 HOH A 148 848 54 HOH HOH . L 7 HOH A 149 849 68 HOH HOH . L 7 HOH A 150 850 85 HOH HOH . L 7 HOH A 151 851 264 HOH HOH . L 7 HOH A 152 852 203 HOH HOH . L 7 HOH A 153 853 41 HOH HOH . L 7 HOH A 154 854 99 HOH HOH . L 7 HOH A 155 855 60 HOH HOH . L 7 HOH A 156 856 61 HOH HOH . L 7 HOH A 157 857 108 HOH HOH . L 7 HOH A 158 858 22 HOH HOH . L 7 HOH A 159 859 101 HOH HOH . L 7 HOH A 160 860 92 HOH HOH . L 7 HOH A 161 861 63 HOH HOH . L 7 HOH A 162 862 235 HOH HOH . L 7 HOH A 163 863 259 HOH HOH . L 7 HOH A 164 864 125 HOH HOH . L 7 HOH A 165 865 284 HOH HOH . L 7 HOH A 166 866 56 HOH HOH . L 7 HOH A 167 867 219 HOH HOH . L 7 HOH A 168 868 272 HOH HOH . L 7 HOH A 169 869 188 HOH HOH . L 7 HOH A 170 870 236 HOH HOH . L 7 HOH A 171 871 286 HOH HOH . L 7 HOH A 172 872 175 HOH HOH . L 7 HOH A 173 873 88 HOH HOH . L 7 HOH A 174 874 257 HOH HOH . L 7 HOH A 175 875 5 HOH HOH . L 7 HOH A 176 876 57 HOH HOH . L 7 HOH A 177 877 62 HOH HOH . L 7 HOH A 178 878 111 HOH HOH . L 7 HOH A 179 879 176 HOH HOH . L 7 HOH A 180 880 178 HOH HOH . L 7 HOH A 181 881 278 HOH HOH . L 7 HOH A 182 882 120 HOH HOH . L 7 HOH A 183 883 165 HOH HOH . L 7 HOH A 184 884 189 HOH HOH . L 7 HOH A 185 885 146 HOH HOH . L 7 HOH A 186 886 122 HOH HOH . L 7 HOH A 187 887 185 HOH HOH . L 7 HOH A 188 888 239 HOH HOH . L 7 HOH A 189 889 2 HOH HOH . L 7 HOH A 190 890 273 HOH HOH . L 7 HOH A 191 891 75 HOH HOH . L 7 HOH A 192 892 275 HOH HOH . L 7 HOH A 193 893 166 HOH HOH . L 7 HOH A 194 894 73 HOH HOH . L 7 HOH A 195 895 212 HOH HOH . L 7 HOH A 196 896 208 HOH HOH . L 7 HOH A 197 897 77 HOH HOH . L 7 HOH A 198 898 98 HOH HOH . L 7 HOH A 199 899 131 HOH HOH . L 7 HOH A 200 900 231 HOH HOH . L 7 HOH A 201 901 216 HOH HOH . L 7 HOH A 202 902 196 HOH HOH . L 7 HOH A 203 903 138 HOH HOH . L 7 HOH A 204 904 211 HOH HOH . L 7 HOH A 205 905 24 HOH HOH . L 7 HOH A 206 906 156 HOH HOH . L 7 HOH A 207 907 59 HOH HOH . L 7 HOH A 208 908 267 HOH HOH . L 7 HOH A 209 909 247 HOH HOH . L 7 HOH A 210 910 119 HOH HOH . L 7 HOH A 211 911 268 HOH HOH . L 7 HOH A 212 912 151 HOH HOH . L 7 HOH A 213 913 172 HOH HOH . L 7 HOH A 214 914 254 HOH HOH . L 7 HOH A 215 915 96 HOH HOH . L 7 HOH A 216 916 200 HOH HOH . L 7 HOH A 217 917 274 HOH HOH . L 7 HOH A 218 918 261 HOH HOH . L 7 HOH A 219 919 270 HOH HOH . L 7 HOH A 220 920 150 HOH HOH . L 7 HOH A 221 921 154 HOH HOH . L 7 HOH A 222 922 126 HOH HOH . L 7 HOH A 223 923 199 HOH HOH . L 7 HOH A 224 924 143 HOH HOH . L 7 HOH A 225 925 223 HOH HOH . L 7 HOH A 226 926 279 HOH HOH . L 7 HOH A 227 927 248 HOH HOH . L 7 HOH A 228 928 140 HOH HOH . L 7 HOH A 229 929 78 HOH HOH . L 7 HOH A 230 930 253 HOH HOH . L 7 HOH A 231 931 243 HOH HOH . L 7 HOH A 232 932 4 HOH HOH . L 7 HOH A 233 933 190 HOH HOH . L 7 HOH A 234 934 251 HOH HOH . L 7 HOH A 235 935 182 HOH HOH . L 7 HOH A 236 936 255 HOH HOH . L 7 HOH A 237 937 133 HOH HOH . L 7 HOH A 238 938 280 HOH HOH . L 7 HOH A 239 939 233 HOH HOH . L 7 HOH A 240 940 192 HOH HOH . L 7 HOH A 241 941 177 HOH HOH . L 7 HOH A 242 942 265 HOH HOH . L 7 HOH A 243 943 84 HOH HOH . L 7 HOH A 244 944 171 HOH HOH . L 7 HOH A 245 945 144 HOH HOH . L 7 HOH A 246 946 263 HOH HOH . L 7 HOH A 247 947 162 HOH HOH . L 7 HOH A 248 948 222 HOH HOH . L 7 HOH A 249 949 137 HOH HOH . L 7 HOH A 250 950 153 HOH HOH . L 7 HOH A 251 951 201 HOH HOH . L 7 HOH A 252 952 206 HOH HOH . L 7 HOH A 253 953 173 HOH HOH . L 7 HOH A 254 954 130 HOH HOH . L 7 HOH A 255 955 187 HOH HOH . L 7 HOH A 256 956 163 HOH HOH . L 7 HOH A 257 957 15 HOH HOH . L 7 HOH A 258 958 276 HOH HOH . L 7 HOH A 259 959 115 HOH HOH . L 7 HOH A 260 960 155 HOH HOH . L 7 HOH A 261 961 229 HOH HOH . L 7 HOH A 262 962 159 HOH HOH . L 7 HOH A 263 963 183 HOH HOH . L 7 HOH A 264 964 258 HOH HOH . L 7 HOH A 265 965 204 HOH HOH . L 7 HOH A 266 966 202 HOH HOH . L 7 HOH A 267 967 226 HOH HOH . L 7 HOH A 268 968 207 HOH HOH . L 7 HOH A 269 969 157 HOH HOH . L 7 HOH A 270 970 147 HOH HOH . L 7 HOH A 271 971 127 HOH HOH . L 7 HOH A 272 972 244 HOH HOH . L 7 HOH A 273 973 134 HOH HOH . L 7 HOH A 274 974 205 HOH HOH . L 7 HOH A 275 975 262 HOH HOH . L 7 HOH A 276 976 195 HOH HOH . L 7 HOH A 277 977 266 HOH HOH . L 7 HOH A 278 978 81 HOH HOH . L 7 HOH A 279 979 242 HOH HOH . L 7 HOH A 280 980 114 HOH HOH . L 7 HOH A 281 981 198 HOH HOH . L 7 HOH A 282 982 141 HOH HOH . L 7 HOH A 283 983 250 HOH HOH . L 7 HOH A 284 984 169 HOH HOH . L 7 HOH A 285 985 249 HOH HOH . L 7 HOH A 286 986 170 HOH HOH . L 7 HOH A 287 987 128 HOH HOH . L 7 HOH A 288 988 271 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 -14.412 -0.334 16.09 1 83.46 ? S DMS 603 A 1 HETATM 2 O O DMS . . . D 3 -14.458 -1.628 15.346 1 84.65 ? O DMS 603 A 1 HETATM 3 C C1 DMS . . . D 3 -12.867 -0.19 17.038 1 82.61 ? C1 DMS 603 A 1 HETATM 4 C C2 DMS . . . D 3 -14.375 1.048 14.919 1 81.52 ? C2 DMS 603 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 360 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 4 #