data_6C0S # _model_server_result.job_id H3i1BpQKYuaOak3JDPGDjw _model_server_result.datetime_utc '2024-10-18 16:21:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":312}' # _entry.id 6C0S # _exptl.entry_id 6C0S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6C0S _cell.length_a 78.9 _cell.length_b 78.9 _cell.length_c 107 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 42 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 A SG CYS 158 A CYS 168 1_555 A SG CYS 173 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 A SG CYS 184 A CYS 191 1_555 A SG CYS 212 A CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6C0S _atom_sites.fract_transf_matrix[1][1] 0.012674 _atom_sites.fract_transf_matrix[1][2] 0.007317 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009346 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EEJ A 1 301 1 EEJ LG1 . C 3 SO4 A 1 302 2 SO4 SO4 . D 4 EDO A 1 303 3 EDO EDO . E 4 EDO A 1 304 4 EDO EDO . F 4 EDO A 1 305 7 EDO EDO . G 4 EDO A 1 306 8 EDO EDO . H 4 EDO A 1 307 9 EDO EDO . I 4 EDO A 1 308 10 EDO EDO . J 4 EDO A 1 309 11 EDO EDO . K 4 EDO A 1 310 13 EDO EDO . L 4 EDO A 1 311 14 EDO EDO . M 4 EDO A 1 312 16 EDO EDO . N 4 EDO A 1 313 18 EDO EDO . O 4 EDO A 1 314 20 EDO EDO . P 5 HOH A 1 401 122 HOH HOH . P 5 HOH A 2 402 119 HOH HOH . P 5 HOH A 3 403 115 HOH HOH . P 5 HOH A 4 404 121 HOH HOH . P 5 HOH A 5 405 10 HOH HOH . P 5 HOH A 6 406 120 HOH HOH . P 5 HOH A 7 407 64 HOH HOH . P 5 HOH A 8 408 127 HOH HOH . P 5 HOH A 9 409 95 HOH HOH . P 5 HOH A 10 410 5 HOH HOH . P 5 HOH A 11 411 1 HOH HOH . P 5 HOH A 12 412 21 HOH HOH . P 5 HOH A 13 413 23 HOH HOH . P 5 HOH A 14 414 110 HOH HOH . P 5 HOH A 15 415 60 HOH HOH . P 5 HOH A 16 416 123 HOH HOH . P 5 HOH A 17 417 24 HOH HOH . P 5 HOH A 18 418 61 HOH HOH . P 5 HOH A 19 419 33 HOH HOH . P 5 HOH A 20 420 31 HOH HOH . P 5 HOH A 21 421 22 HOH HOH . P 5 HOH A 22 422 2 HOH HOH . P 5 HOH A 23 423 37 HOH HOH . P 5 HOH A 24 424 124 HOH HOH . P 5 HOH A 25 425 65 HOH HOH . P 5 HOH A 26 426 11 HOH HOH . P 5 HOH A 27 427 106 HOH HOH . P 5 HOH A 28 428 16 HOH HOH . P 5 HOH A 29 429 81 HOH HOH . P 5 HOH A 30 430 13 HOH HOH . P 5 HOH A 31 431 42 HOH HOH . P 5 HOH A 32 432 114 HOH HOH . P 5 HOH A 33 433 94 HOH HOH . P 5 HOH A 34 434 138 HOH HOH . P 5 HOH A 35 435 79 HOH HOH . P 5 HOH A 36 436 62 HOH HOH . P 5 HOH A 37 437 131 HOH HOH . P 5 HOH A 38 438 66 HOH HOH . P 5 HOH A 39 439 82 HOH HOH . P 5 HOH A 40 440 73 HOH HOH . P 5 HOH A 41 441 63 HOH HOH . P 5 HOH A 42 442 17 HOH HOH . P 5 HOH A 43 443 3 HOH HOH . P 5 HOH A 44 444 77 HOH HOH . P 5 HOH A 45 445 136 HOH HOH . P 5 HOH A 46 446 36 HOH HOH . P 5 HOH A 47 447 100 HOH HOH . P 5 HOH A 48 448 4 HOH HOH . P 5 HOH A 49 449 70 HOH HOH . P 5 HOH A 50 450 113 HOH HOH . P 5 HOH A 51 451 28 HOH HOH . P 5 HOH A 52 452 68 HOH HOH . P 5 HOH A 53 453 86 HOH HOH . P 5 HOH A 54 454 133 HOH HOH . P 5 HOH A 55 455 32 HOH HOH . P 5 HOH A 56 456 88 HOH HOH . P 5 HOH A 57 457 46 HOH HOH . P 5 HOH A 58 458 54 HOH HOH . P 5 HOH A 59 459 9 HOH HOH . P 5 HOH A 60 460 112 HOH HOH . P 5 HOH A 61 461 141 HOH HOH . P 5 HOH A 62 462 116 HOH HOH . P 5 HOH A 63 463 19 HOH HOH . P 5 HOH A 64 464 6 HOH HOH . P 5 HOH A 65 465 139 HOH HOH . P 5 HOH A 66 466 18 HOH HOH . P 5 HOH A 67 467 92 HOH HOH . P 5 HOH A 68 468 98 HOH HOH . P 5 HOH A 69 469 89 HOH HOH . P 5 HOH A 70 470 118 HOH HOH . P 5 HOH A 71 471 78 HOH HOH . P 5 HOH A 72 472 71 HOH HOH . P 5 HOH A 73 473 107 HOH HOH . P 5 HOH A 74 474 91 HOH HOH . P 5 HOH A 75 475 67 HOH HOH . P 5 HOH A 76 476 57 HOH HOH . P 5 HOH A 77 477 130 HOH HOH . P 5 HOH A 78 478 48 HOH HOH . P 5 HOH A 79 479 14 HOH HOH . P 5 HOH A 80 480 104 HOH HOH . P 5 HOH A 81 481 12 HOH HOH . P 5 HOH A 82 482 47 HOH HOH . P 5 HOH A 83 483 96 HOH HOH . P 5 HOH A 84 484 117 HOH HOH . P 5 HOH A 85 485 20 HOH HOH . P 5 HOH A 86 486 30 HOH HOH . P 5 HOH A 87 487 135 HOH HOH . P 5 HOH A 88 488 74 HOH HOH . P 5 HOH A 89 489 8 HOH HOH . P 5 HOH A 90 490 80 HOH HOH . P 5 HOH A 91 491 58 HOH HOH . P 5 HOH A 92 492 111 HOH HOH . P 5 HOH A 93 493 35 HOH HOH . P 5 HOH A 94 494 134 HOH HOH . P 5 HOH A 95 495 87 HOH HOH . P 5 HOH A 96 496 128 HOH HOH . P 5 HOH A 97 497 25 HOH HOH . P 5 HOH A 98 498 76 HOH HOH . P 5 HOH A 99 499 105 HOH HOH . P 5 HOH A 100 500 7 HOH HOH . P 5 HOH A 101 501 26 HOH HOH . P 5 HOH A 102 502 40 HOH HOH . P 5 HOH A 103 503 103 HOH HOH . P 5 HOH A 104 504 137 HOH HOH . P 5 HOH A 105 505 90 HOH HOH . P 5 HOH A 106 506 97 HOH HOH . P 5 HOH A 107 507 69 HOH HOH . P 5 HOH A 108 508 132 HOH HOH . P 5 HOH A 109 509 52 HOH HOH . P 5 HOH A 110 510 44 HOH HOH . P 5 HOH A 111 511 50 HOH HOH . P 5 HOH A 112 512 85 HOH HOH . P 5 HOH A 113 513 34 HOH HOH . P 5 HOH A 114 514 38 HOH HOH . P 5 HOH A 115 515 29 HOH HOH . P 5 HOH A 116 516 51 HOH HOH . P 5 HOH A 117 517 53 HOH HOH . P 5 HOH A 118 518 45 HOH HOH . P 5 HOH A 119 519 56 HOH HOH . P 5 HOH A 120 520 59 HOH HOH . P 5 HOH A 121 521 39 HOH HOH . P 5 HOH A 122 522 41 HOH HOH . P 5 HOH A 123 523 75 HOH HOH . P 5 HOH A 124 524 101 HOH HOH . P 5 HOH A 125 525 129 HOH HOH . P 5 HOH A 126 526 102 HOH HOH . P 5 HOH A 127 527 55 HOH HOH . P 5 HOH A 128 528 15 HOH HOH . P 5 HOH A 129 529 109 HOH HOH . P 5 HOH A 130 530 84 HOH HOH . P 5 HOH A 131 531 43 HOH HOH . P 5 HOH A 132 532 83 HOH HOH . P 5 HOH A 133 533 140 HOH HOH . P 5 HOH A 134 534 27 HOH HOH . P 5 HOH A 135 535 99 HOH HOH . P 5 HOH A 136 536 93 HOH HOH . P 5 HOH A 137 537 49 HOH HOH . P 5 HOH A 138 538 125 HOH HOH . P 5 HOH A 139 539 72 HOH HOH . P 5 HOH A 140 540 108 HOH HOH . P 5 HOH A 141 541 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . M 4 20.419 -22.597 25.865 1 52.8 ? C1 EDO 312 A 1 HETATM 2 O O1 EDO . . . M 4 20.226 -23.095 24.543 1 57.03 ? O1 EDO 312 A 1 HETATM 3 C C2 EDO . . . M 4 21.924 -22.659 26.238 1 48.05 ? C2 EDO 312 A 1 HETATM 4 O O2 EDO . . . M 4 22.662 -21.744 25.467 1 43.94 ? O2 EDO 312 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #