data_6C0T # _model_server_result.job_id mZr1n5G1QVVOJZm4DC3-CQ _model_server_result.datetime_utc '2025-01-10 18:56:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c0t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 6C0T # _exptl.entry_id 6C0T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6C0T _cell.length_a 85.73 _cell.length_b 85.73 _cell.length_c 50.664 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C0T _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TRP 192 A TRP 516 1_555 A N TPO 193 A TPO 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 A C TPO 193 A TPO 517 1_555 A N PHE 194 A PHE 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 321 n n C1 C2 PGE sing 322 n n C1 H1 PGE sing 323 n n C1 H12 PGE sing 324 n n O1 HO1 PGE sing 325 n n C2 O2 PGE sing 326 n n C2 H2 PGE sing 327 n n C2 H22 PGE sing 328 n n O2 C3 PGE sing 329 n n C3 C4 PGE sing 330 n n C3 H3 PGE sing 331 n n C3 H32 PGE sing 332 n n C4 O3 PGE sing 333 n n C4 H4 PGE sing 334 n n C4 H42 PGE sing 335 n n O4 C6 PGE sing 336 n n O4 HO4 PGE sing 337 n n C6 C5 PGE sing 338 n n C6 H6 PGE sing 339 n n C6 H62 PGE sing 340 n n C5 O3 PGE sing 341 n n C5 H5 PGE sing 342 n n C5 H52 PGE sing 343 n n # _atom_sites.entry_id 6C0T _atom_sites.fract_transf_matrix[1][1] 0.011665 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019738 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EE4 A 1 701 700 EE4 LIG . C 3 DMS A 1 702 702 DMS DMS . D 4 PGE A 1 703 703 PGE PGE . E 5 HOH A 1 801 99 HOH HOH . E 5 HOH A 2 802 27 HOH HOH . E 5 HOH A 3 803 95 HOH HOH . E 5 HOH A 4 804 53 HOH HOH . E 5 HOH A 5 805 93 HOH HOH . E 5 HOH A 6 806 25 HOH HOH . E 5 HOH A 7 807 20 HOH HOH . E 5 HOH A 8 808 78 HOH HOH . E 5 HOH A 9 809 23 HOH HOH . E 5 HOH A 10 810 2 HOH HOH . E 5 HOH A 11 811 65 HOH HOH . E 5 HOH A 12 812 43 HOH HOH . E 5 HOH A 13 813 34 HOH HOH . E 5 HOH A 14 814 48 HOH HOH . E 5 HOH A 15 815 87 HOH HOH . E 5 HOH A 16 816 3 HOH HOH . E 5 HOH A 17 817 15 HOH HOH . E 5 HOH A 18 818 10 HOH HOH . E 5 HOH A 19 819 5 HOH HOH . E 5 HOH A 20 820 74 HOH HOH . E 5 HOH A 21 821 61 HOH HOH . E 5 HOH A 22 822 67 HOH HOH . E 5 HOH A 23 823 82 HOH HOH . E 5 HOH A 24 824 16 HOH HOH . E 5 HOH A 25 825 1 HOH HOH . E 5 HOH A 26 826 6 HOH HOH . E 5 HOH A 27 827 24 HOH HOH . E 5 HOH A 28 828 4 HOH HOH . E 5 HOH A 29 829 58 HOH HOH . E 5 HOH A 30 830 28 HOH HOH . E 5 HOH A 31 831 92 HOH HOH . E 5 HOH A 32 832 21 HOH HOH . E 5 HOH A 33 833 39 HOH HOH . E 5 HOH A 34 834 59 HOH HOH . E 5 HOH A 35 835 41 HOH HOH . E 5 HOH A 36 836 49 HOH HOH . E 5 HOH A 37 837 9 HOH HOH . E 5 HOH A 38 838 11 HOH HOH . E 5 HOH A 39 839 30 HOH HOH . E 5 HOH A 40 840 13 HOH HOH . E 5 HOH A 41 841 36 HOH HOH . E 5 HOH A 42 842 54 HOH HOH . E 5 HOH A 43 843 32 HOH HOH . E 5 HOH A 44 844 31 HOH HOH . E 5 HOH A 45 845 33 HOH HOH . E 5 HOH A 46 846 8 HOH HOH . E 5 HOH A 47 847 35 HOH HOH . E 5 HOH A 48 848 71 HOH HOH . E 5 HOH A 49 849 47 HOH HOH . E 5 HOH A 50 850 38 HOH HOH . E 5 HOH A 51 851 57 HOH HOH . E 5 HOH A 52 852 73 HOH HOH . E 5 HOH A 53 853 12 HOH HOH . E 5 HOH A 54 854 52 HOH HOH . E 5 HOH A 55 855 14 HOH HOH . E 5 HOH A 56 856 89 HOH HOH . E 5 HOH A 57 857 77 HOH HOH . E 5 HOH A 58 858 26 HOH HOH . E 5 HOH A 59 859 56 HOH HOH . E 5 HOH A 60 860 37 HOH HOH . E 5 HOH A 61 861 7 HOH HOH . E 5 HOH A 62 862 63 HOH HOH . E 5 HOH A 63 863 42 HOH HOH . E 5 HOH A 64 864 75 HOH HOH . E 5 HOH A 65 865 55 HOH HOH . E 5 HOH A 66 866 80 HOH HOH . E 5 HOH A 67 867 64 HOH HOH . E 5 HOH A 68 868 62 HOH HOH . E 5 HOH A 69 869 19 HOH HOH . E 5 HOH A 70 870 40 HOH HOH . E 5 HOH A 71 871 86 HOH HOH . E 5 HOH A 72 872 88 HOH HOH . E 5 HOH A 73 873 85 HOH HOH . E 5 HOH A 74 874 18 HOH HOH . E 5 HOH A 75 875 84 HOH HOH . E 5 HOH A 76 876 22 HOH HOH . E 5 HOH A 77 877 17 HOH HOH . E 5 HOH A 78 878 66 HOH HOH . E 5 HOH A 79 879 91 HOH HOH . E 5 HOH A 80 880 44 HOH HOH . E 5 HOH A 81 881 72 HOH HOH . E 5 HOH A 82 882 90 HOH HOH . E 5 HOH A 83 883 45 HOH HOH . E 5 HOH A 84 884 81 HOH HOH . E 5 HOH A 85 885 83 HOH HOH . E 5 HOH A 86 886 98 HOH HOH . E 5 HOH A 87 887 60 HOH HOH . E 5 HOH A 88 888 50 HOH HOH . E 5 HOH A 89 889 97 HOH HOH . E 5 HOH A 90 890 94 HOH HOH . E 5 HOH A 91 891 29 HOH HOH . E 5 HOH A 92 892 79 HOH HOH . E 5 HOH A 93 893 68 HOH HOH . E 5 HOH A 94 894 69 HOH HOH . E 5 HOH A 95 895 76 HOH HOH . E 5 HOH A 96 896 51 HOH HOH . E 5 HOH A 97 897 46 HOH HOH . E 5 HOH A 98 898 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 4 -7.94 30.59 1.976 1 83.9 ? C1 PGE 703 A 1 HETATM 2 O O1 PGE . . . D 4 -7.785 31.747 2.786 1 84.05 ? O1 PGE 703 A 1 HETATM 3 C C2 PGE . . . D 4 -6.811 29.63 2.293 1 83.99 ? C2 PGE 703 A 1 HETATM 4 O O2 PGE . . . D 4 -6.605 28.752 1.204 1 84.66 ? O2 PGE 703 A 1 HETATM 5 C C3 PGE . . . D 4 -5.28 28.259 1.132 1 85.91 ? C3 PGE 703 A 1 HETATM 6 C C4 PGE . . . D 4 -4.765 28.388 -0.289 1 88.13 ? C4 PGE 703 A 1 HETATM 7 O O4 PGE . . . D 4 -2.299 27.933 -3.049 1 95.1 ? O4 PGE 703 A 1 HETATM 8 C C6 PGE . . . D 4 -1.651 28.578 -1.961 1 94.54 ? C6 PGE 703 A 1 HETATM 9 C C5 PGE . . . D 4 -2.695 29.227 -1.07 1 91.84 ? C5 PGE 703 A 1 HETATM 10 O O3 PGE . . . D 4 -3.357 28.239 -0.303 1 89.93 ? O3 PGE 703 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #