data_6C1E # _model_server_result.job_id rM7DwmyWEEn79ZFoHYtLyw _model_server_result.datetime_utc '2024-11-27 05:26:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c1e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1309}' # _entry.id 6C1E # _exptl.entry_id 6C1E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 678.94 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6C1E _cell.length_a 126.775 _cell.length_b 126.997 _cell.length_c 192.287 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C1E _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 126.775 253.994 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N # _chem_comp.formula 'C36 H73 N O8 P 1' _chem_comp.formula_weight 678.94 _chem_comp.id PX4 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 P1 PX4 sing 344 n n O1 H1P PX4 sing 345 n n O2 P1 PX4 doub 346 n n P1 O3 PX4 sing 347 n n P1 O4 PX4 sing 348 n n O3 C1 PX4 sing 349 n n C1 C2 PX4 sing 350 n n C1 H1 PX4 sing 351 n n C1 H2 PX4 sing 352 n n C2 N1 PX4 sing 353 n n C2 H3 PX4 sing 354 n n C2 H4 PX4 sing 355 n n N1 C3 PX4 sing 356 n n N1 C4 PX4 sing 357 n n N1 C5 PX4 sing 358 n n C3 H5 PX4 sing 359 n n C3 H6 PX4 sing 360 n n C3 H7 PX4 sing 361 n n C4 H8 PX4 sing 362 n n C4 H9 PX4 sing 363 n n C4 H10 PX4 sing 364 n n C5 H11 PX4 sing 365 n n C5 H12 PX4 sing 366 n n C5 H13 PX4 sing 367 n n O4 C6 PX4 sing 368 n n C6 C7 PX4 sing 369 n n C6 H14 PX4 sing 370 n n C6 H15 PX4 sing 371 n n C7 C8 PX4 sing 372 n n C7 O7 PX4 sing 373 n n C7 H16 PX4 sing 374 n n C8 O5 PX4 sing 375 n n C8 H17 PX4 sing 376 n n C8 H18 PX4 sing 377 n n O5 C9 PX4 sing 378 n n C9 O6 PX4 doub 379 n n C9 C10 PX4 sing 380 n n C10 C11 PX4 sing 381 n n C10 H19 PX4 sing 382 n n C10 H20 PX4 sing 383 n n C11 C12 PX4 sing 384 n n C11 H21 PX4 sing 385 n n C11 H22 PX4 sing 386 n n C12 C13 PX4 sing 387 n n C12 H23 PX4 sing 388 n n C12 H24 PX4 sing 389 n n C13 C14 PX4 sing 390 n n C13 H25 PX4 sing 391 n n C13 H26 PX4 sing 392 n n C14 C15 PX4 sing 393 n n C14 H27 PX4 sing 394 n n C14 H28 PX4 sing 395 n n C15 C16 PX4 sing 396 n n C15 H29 PX4 sing 397 n n C15 H30 PX4 sing 398 n n C16 C17 PX4 sing 399 n n C16 H31 PX4 sing 400 n n C16 H32 PX4 sing 401 n n C17 C18 PX4 sing 402 n n C17 H33 PX4 sing 403 n n C17 H34 PX4 sing 404 n n C18 C19 PX4 sing 405 n n C18 H35 PX4 sing 406 n n C18 H36 PX4 sing 407 n n C19 C20 PX4 sing 408 n n C19 H37 PX4 sing 409 n n C19 H38 PX4 sing 410 n n C20 C21 PX4 sing 411 n n C20 H39 PX4 sing 412 n n C20 H40 PX4 sing 413 n n C21 C22 PX4 sing 414 n n C21 H41 PX4 sing 415 n n C21 H42 PX4 sing 416 n n C22 H43 PX4 sing 417 n n C22 H44 PX4 sing 418 n n C22 H45 PX4 sing 419 n n O7 C23 PX4 sing 420 n n C23 O8 PX4 doub 421 n n C23 C24 PX4 sing 422 n n C24 C25 PX4 sing 423 n n C24 H46 PX4 sing 424 n n C24 H47 PX4 sing 425 n n C25 C26 PX4 sing 426 n n C25 H48 PX4 sing 427 n n C25 H49 PX4 sing 428 n n C26 C27 PX4 sing 429 n n C26 H50 PX4 sing 430 n n C26 H51 PX4 sing 431 n n C27 C28 PX4 sing 432 n n C27 H52 PX4 sing 433 n n C27 H53 PX4 sing 434 n n C28 C29 PX4 sing 435 n n C28 H54 PX4 sing 436 n n C28 H55 PX4 sing 437 n n C29 C30 PX4 sing 438 n n C29 H56 PX4 sing 439 n n C29 H57 PX4 sing 440 n n C30 C31 PX4 sing 441 n n C30 H58 PX4 sing 442 n n C30 H59 PX4 sing 443 n n C31 C32 PX4 sing 444 n n C31 H60 PX4 sing 445 n n C31 H61 PX4 sing 446 n n C32 C33 PX4 sing 447 n n C32 H62 PX4 sing 448 n n C32 H63 PX4 sing 449 n n C33 C34 PX4 sing 450 n n C33 H64 PX4 sing 451 n n C33 H65 PX4 sing 452 n n C34 C35 PX4 sing 453 n n C34 H66 PX4 sing 454 n n C34 H67 PX4 sing 455 n n C35 C36 PX4 sing 456 n n C35 H68 PX4 sing 457 n n C35 H69 PX4 sing 458 n n C36 H70 PX4 sing 459 n n C36 H71 PX4 sing 460 n n C36 H72 PX4 sing 461 n n # _atom_sites.entry_id 6C1E _atom_sites.fract_transf_matrix[1][1] 0.007888 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005201 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PX4 A 1 1301 3002 PX4 PX4 . D 2 PX4 A 1 1302 3003 PX4 PX4 . E 2 PX4 A 1 1303 3004 PX4 PX4 . F 2 PX4 A 1 1304 3005 PX4 PX4 . G 2 PX4 A 1 1305 3006 PX4 PX4 . H 2 PX4 A 1 1306 3007 PX4 PX4 . I 2 PX4 A 1 1307 3009 PX4 PX4 . J 3 BNC A 1 1308 3010 BNC 1N7 . K 2 PX4 A 1 1309 3002 PX4 PX4 . L 2 PX4 A 1 1310 3004 PX4 PX4 . M 2 PX4 A 1 1311 3006 PX4 PX4 . N 2 PX4 B 1 3001 3001 PX4 PX4 . O 2 PX4 B 1 3002 3008 PX4 PX4 . P 2 PX4 B 1 3003 3001 PX4 PX4 . Q 2 PX4 B 1 3004 3003 PX4 PX4 . R 2 PX4 B 1 3005 3005 PX4 PX4 . S 2 PX4 B 1 3006 3007 PX4 PX4 . T 2 PX4 B 1 3007 3008 PX4 PX4 . U 2 PX4 B 1 3008 3009 PX4 PX4 . V 4 UHH B 1 3009 3010 UHH 1N7 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PX4 . . . K 2 35.074 141.403 8.336 1 184.15 ? O1 PX4 1309 A 1 HETATM 2 O O2 PX4 . . . K 2 37.055 141.941 6.939 1 165.98 ? O2 PX4 1309 A 1 HETATM 3 P P1 PX4 . . . K 2 36.296 140.83 7.65 1 178.07 ? P1 PX4 1309 A 1 HETATM 4 O O3 PX4 . . . K 2 35.839 139.736 6.602 1 123.12 ? O3 PX4 1309 A 1 HETATM 5 O O4 PX4 . . . K 2 37.254 140.143 8.734 1 90.99 ? O4 PX4 1309 A 1 HETATM 6 C C6 PX4 . . . K 2 36.887 140.142 10.125 1 97.08 ? C6 PX4 1309 A 1 HETATM 7 C C7 PX4 . . . K 2 38.058 139.676 10.992 1 108.53 ? C7 PX4 1309 A 1 HETATM 8 C C8 PX4 . . . K 2 38.1 140.486 12.295 1 119.29 ? C8 PX4 1309 A 1 HETATM 9 O O5 PX4 . . . K 2 36.925 140.407 13.113 1 110.44 ? O5 PX4 1309 A 1 HETATM 10 C C9 PX4 . . . K 2 36.816 141.39 14.172 1 105.69 ? C9 PX4 1309 A 1 HETATM 11 O O6 PX4 . . . K 2 36.687 142.544 13.874 1 111.15 ? O6 PX4 1309 A 1 HETATM 12 C C10 PX4 . . . K 2 36.833 140.985 15.686 1 139.78 ? C10 PX4 1309 A 1 HETATM 13 C C11 PX4 . . . K 2 36.977 142.208 16.658 1 87.93 ? C11 PX4 1309 A 1 HETATM 14 C C12 PX4 . . . K 2 36.285 141.938 18.06 1 83.55 ? C12 PX4 1309 A 1 HETATM 15 C C13 PX4 . . . K 2 37.209 142.312 19.253 1 99.71 ? C13 PX4 1309 A 1 HETATM 16 C C14 PX4 . . . K 2 36.534 141.969 20.591 1 88.33 ? C14 PX4 1309 A 1 HETATM 17 C C15 PX4 . . . K 2 37.58 141.831 21.745 1 105.52 ? C15 PX4 1309 A 1 HETATM 18 C C16 PX4 . . . K 2 37.208 142.733 22.982 1 94.78 ? C16 PX4 1309 A 1 HETATM 19 C C17 PX4 . . . K 2 38.406 142.848 23.962 1 92.94 ? C17 PX4 1309 A 1 HETATM 20 C C18 PX4 . . . K 2 38.612 144.328 24.383 1 95.5 ? C18 PX4 1309 A 1 HETATM 21 C C19 PX4 . . . K 2 39.305 144.38 25.708 1 100.78 ? C19 PX4 1309 A 1 HETATM 22 C C20 PX4 . . . K 2 39.364 145.835 26.216 1 104.57 ? C20 PX4 1309 A 1 HETATM 23 C C21 PX4 . . . K 2 40.362 146.674 25.409 1 98.87 ? C21 PX4 1309 A 1 HETATM 24 O O7 PX4 . . . K 2 37.974 138.246 11.176 1 114.11 ? O7 PX4 1309 A 1 HETATM 25 C C23 PX4 . . . K 2 38.579 137.713 12.37 1 123.7 ? C23 PX4 1309 A 1 HETATM 26 O O8 PX4 . . . K 2 39.798 137.656 12.464 1 124.46 ? O8 PX4 1309 A 1 HETATM 27 C C24 PX4 . . . K 2 37.73 137.205 13.54 1 121.31 ? C24 PX4 1309 A 1 HETATM 28 C C25 PX4 . . . K 2 38.642 136.811 14.723 1 111.81 ? C25 PX4 1309 A 1 HETATM 29 C C26 PX4 . . . K 2 38.775 138.025 15.709 1 130.58 ? C26 PX4 1309 A 1 HETATM 30 C C27 PX4 . . . K 2 39.433 137.592 17.056 1 122.8 ? C27 PX4 1309 A 1 HETATM 31 C C28 PX4 . . . K 2 38.982 138.438 18.265 1 110.68 ? C28 PX4 1309 A 1 HETATM 32 C C29 PX4 . . . K 2 39.622 137.887 19.53 1 105.6 ? C29 PX4 1309 A 1 HETATM 33 C C30 PX4 . . . K 2 39.714 138.976 20.626 1 107.75 ? C30 PX4 1309 A 1 HETATM 34 C C31 PX4 . . . K 2 40.079 138.371 22.012 1 79.56 ? C31 PX4 1309 A 1 HETATM 35 C C32 PX4 . . . K 2 40.806 139.454 22.866 1 106.48 ? C32 PX4 1309 A 1 HETATM 36 C C33 PX4 . . . K 2 40.471 139.342 24.396 1 91.32 ? C33 PX4 1309 A 1 HETATM 37 C C34 PX4 . . . K 2 41.268 140.404 25.183 1 95.98 ? C34 PX4 1309 A 1 HETATM 38 C C35 PX4 . . . K 2 40.888 140.378 26.69 1 127.85 ? C35 PX4 1309 A 1 HETATM 39 C C36 PX4 . . . K 2 41.517 141.559 27.425 1 126.59 ? C36 PX4 1309 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 39 #