data_6C1E
#
_model_server_result.job_id            1hDj9xvNWjMDR2FS5yrN6Q 
_model_server_result.datetime_utc      '2024-11-23 14:05:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6c1e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":3003}' 
#
_entry.id    6C1E 
#
_exptl.entry_id    6C1E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              678.94 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    18 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6C1E 
_cell.length_a            126.775 
_cell.length_b            126.997 
_cell.length_c            192.287 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6C1E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 126.775 253.994 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
#
_chem_comp.formula           'C36 H73 N O8 P 1' 
_chem_comp.formula_weight    678.94 
_chem_comp.id                PX4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 P1 PX4 sing 344 n n 
O1 H1P PX4 sing 345 n n 
O2 P1 PX4 doub 346 n n 
P1 O3 PX4 sing 347 n n 
P1 O4 PX4 sing 348 n n 
O3 C1 PX4 sing 349 n n 
C1 C2 PX4 sing 350 n n 
C1 H1 PX4 sing 351 n n 
C1 H2 PX4 sing 352 n n 
C2 N1 PX4 sing 353 n n 
C2 H3 PX4 sing 354 n n 
C2 H4 PX4 sing 355 n n 
N1 C3 PX4 sing 356 n n 
N1 C4 PX4 sing 357 n n 
N1 C5 PX4 sing 358 n n 
C3 H5 PX4 sing 359 n n 
C3 H6 PX4 sing 360 n n 
C3 H7 PX4 sing 361 n n 
C4 H8 PX4 sing 362 n n 
C4 H9 PX4 sing 363 n n 
C4 H10 PX4 sing 364 n n 
C5 H11 PX4 sing 365 n n 
C5 H12 PX4 sing 366 n n 
C5 H13 PX4 sing 367 n n 
O4 C6 PX4 sing 368 n n 
C6 C7 PX4 sing 369 n n 
C6 H14 PX4 sing 370 n n 
C6 H15 PX4 sing 371 n n 
C7 C8 PX4 sing 372 n n 
C7 O7 PX4 sing 373 n n 
C7 H16 PX4 sing 374 n n 
C8 O5 PX4 sing 375 n n 
C8 H17 PX4 sing 376 n n 
C8 H18 PX4 sing 377 n n 
O5 C9 PX4 sing 378 n n 
C9 O6 PX4 doub 379 n n 
C9 C10 PX4 sing 380 n n 
C10 C11 PX4 sing 381 n n 
C10 H19 PX4 sing 382 n n 
C10 H20 PX4 sing 383 n n 
C11 C12 PX4 sing 384 n n 
C11 H21 PX4 sing 385 n n 
C11 H22 PX4 sing 386 n n 
C12 C13 PX4 sing 387 n n 
C12 H23 PX4 sing 388 n n 
C12 H24 PX4 sing 389 n n 
C13 C14 PX4 sing 390 n n 
C13 H25 PX4 sing 391 n n 
C13 H26 PX4 sing 392 n n 
C14 C15 PX4 sing 393 n n 
C14 H27 PX4 sing 394 n n 
C14 H28 PX4 sing 395 n n 
C15 C16 PX4 sing 396 n n 
C15 H29 PX4 sing 397 n n 
C15 H30 PX4 sing 398 n n 
C16 C17 PX4 sing 399 n n 
C16 H31 PX4 sing 400 n n 
C16 H32 PX4 sing 401 n n 
C17 C18 PX4 sing 402 n n 
C17 H33 PX4 sing 403 n n 
C17 H34 PX4 sing 404 n n 
C18 C19 PX4 sing 405 n n 
C18 H35 PX4 sing 406 n n 
C18 H36 PX4 sing 407 n n 
C19 C20 PX4 sing 408 n n 
C19 H37 PX4 sing 409 n n 
C19 H38 PX4 sing 410 n n 
C20 C21 PX4 sing 411 n n 
C20 H39 PX4 sing 412 n n 
C20 H40 PX4 sing 413 n n 
C21 C22 PX4 sing 414 n n 
C21 H41 PX4 sing 415 n n 
C21 H42 PX4 sing 416 n n 
C22 H43 PX4 sing 417 n n 
C22 H44 PX4 sing 418 n n 
C22 H45 PX4 sing 419 n n 
O7 C23 PX4 sing 420 n n 
C23 O8 PX4 doub 421 n n 
C23 C24 PX4 sing 422 n n 
C24 C25 PX4 sing 423 n n 
C24 H46 PX4 sing 424 n n 
C24 H47 PX4 sing 425 n n 
C25 C26 PX4 sing 426 n n 
C25 H48 PX4 sing 427 n n 
C25 H49 PX4 sing 428 n n 
C26 C27 PX4 sing 429 n n 
C26 H50 PX4 sing 430 n n 
C26 H51 PX4 sing 431 n n 
C27 C28 PX4 sing 432 n n 
C27 H52 PX4 sing 433 n n 
C27 H53 PX4 sing 434 n n 
C28 C29 PX4 sing 435 n n 
C28 H54 PX4 sing 436 n n 
C28 H55 PX4 sing 437 n n 
C29 C30 PX4 sing 438 n n 
C29 H56 PX4 sing 439 n n 
C29 H57 PX4 sing 440 n n 
C30 C31 PX4 sing 441 n n 
C30 H58 PX4 sing 442 n n 
C30 H59 PX4 sing 443 n n 
C31 C32 PX4 sing 444 n n 
C31 H60 PX4 sing 445 n n 
C31 H61 PX4 sing 446 n n 
C32 C33 PX4 sing 447 n n 
C32 H62 PX4 sing 448 n n 
C32 H63 PX4 sing 449 n n 
C33 C34 PX4 sing 450 n n 
C33 H64 PX4 sing 451 n n 
C33 H65 PX4 sing 452 n n 
C34 C35 PX4 sing 453 n n 
C34 H66 PX4 sing 454 n n 
C34 H67 PX4 sing 455 n n 
C35 C36 PX4 sing 456 n n 
C35 H68 PX4 sing 457 n n 
C35 H69 PX4 sing 458 n n 
C36 H70 PX4 sing 459 n n 
C36 H71 PX4 sing 460 n n 
C36 H72 PX4 sing 461 n n 
#
_atom_sites.entry_id                     6C1E 
_atom_sites.fract_transf_matrix[1][1]    0.007888 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007874 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005201 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PX4 A 1 1301 3002 PX4 PX4 . 
D 2 PX4 A 1 1302 3003 PX4 PX4 . 
E 2 PX4 A 1 1303 3004 PX4 PX4 . 
F 2 PX4 A 1 1304 3005 PX4 PX4 . 
G 2 PX4 A 1 1305 3006 PX4 PX4 . 
H 2 PX4 A 1 1306 3007 PX4 PX4 . 
I 2 PX4 A 1 1307 3009 PX4 PX4 . 
J 3 BNC A 1 1308 3010 BNC 1N7 . 
K 2 PX4 A 1 1309 3002 PX4 PX4 . 
L 2 PX4 A 1 1310 3004 PX4 PX4 . 
M 2 PX4 A 1 1311 3006 PX4 PX4 . 
N 2 PX4 B 1 3001 3001 PX4 PX4 . 
O 2 PX4 B 1 3002 3008 PX4 PX4 . 
P 2 PX4 B 1 3003 3001 PX4 PX4 . 
Q 2 PX4 B 1 3004 3003 PX4 PX4 . 
R 2 PX4 B 1 3005 3005 PX4 PX4 . 
S 2 PX4 B 1 3006 3007 PX4 PX4 . 
T 2 PX4 B 1 3007 3008 PX4 PX4 . 
U 2 PX4 B 1 3008 3009 PX4 PX4 . 
V 4 UHH B 1 3009 3010 UHH 1N7 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PX4 . . . P 2 41.669 134.559 12.143 1 131.33 ? O1 PX4 3003 B 1 
HETATM 2 O O2 PX4 . . . P 2 39.966 133.337 10.966 1 116.1 ? O2 PX4 3003 B 1 
HETATM 3 P P1 PX4 . . . P 2 41.369 133.226 11.534 1 112.31 ? P1 PX4 3003 B 1 
HETATM 4 O O3 PX4 . . . P 2 42.546 132.978 10.505 1 129.28 ? O3 PX4 3003 B 1 
HETATM 5 C C1 PX4 . . . P 2 43.577 132.057 10.815 1 117.57 ? C1 PX4 3003 B 1 
HETATM 6 C C2 PX4 . . . P 2 44.238 131.547 9.514 1 112.13 ? C2 PX4 3003 B 1 
HETATM 7 N N1 PX4 . . . P 2 43.273 130.887 8.617 1 126.93 ? N1 PX4 3003 B 1 
HETATM 8 C C3 PX4 . . . P 2 42.195 130.238 9.317 1 116.78 ? C3 PX4 3003 B 1 
HETATM 9 C C4 PX4 . . . P 2 42.723 131.803 7.688 1 136.01 ? C4 PX4 3003 B 1 
HETATM 10 C C5 PX4 . . . P 2 43.987 129.863 7.849 1 137.66 ? C5 PX4 3003 B 1 
HETATM 11 O O4 PX4 . . . P 2 41.313 132.126 12.668 1 135.49 ? O4 PX4 3003 B 1 
HETATM 12 C C6 PX4 . . . P 2 40.561 132.589 13.799 1 137.55 ? C6 PX4 3003 B 1 
HETATM 13 C C7 PX4 . . . P 2 41.498 133.118 14.886 1 124.46 ? C7 PX4 3003 B 1 
HETATM 14 C C8 PX4 . . . P 2 40.712 133.013 16.18 1 137.17 ? C8 PX4 3003 B 1 
HETATM 15 O O5 PX4 . . . P 2 41.425 133.44 17.331 1 148.32 ? O5 PX4 3003 B 1 
HETATM 16 C C9 PX4 . . . P 2 41.235 134.826 17.648 1 149.66 ? C9 PX4 3003 B 1 
HETATM 17 O O6 PX4 . . . P 2 41.732 135.657 16.939 1 148.51 ? O6 PX4 3003 B 1 
HETATM 18 O O7 PX4 . . . P 2 42.65 132.276 14.821 1 104.36 ? O7 PX4 3003 B 1 
HETATM 19 C C23 PX4 . . . P 2 43.686 132.544 15.748 1 104.49 ? C23 PX4 3003 B 1 
HETATM 20 O O8 PX4 . . . P 2 43.814 133.686 16.151 1 114.22 ? O8 PX4 3003 B 1 
HETATM 21 C C24 PX4 . . . P 2 44.578 131.404 16.222 1 95.22 ? C24 PX4 3003 B 1 
HETATM 22 C C25 PX4 . . . P 2 45.989 131.864 16.605 1 92.38 ? C25 PX4 3003 B 1 
HETATM 23 C C26 PX4 . . . P 2 45.964 132.786 17.87 1 71.6 ? C26 PX4 3003 B 1 
HETATM 24 C C27 PX4 . . . P 2 45.768 131.927 19.131 1 71.8 ? C27 PX4 3003 B 1 
HETATM 25 C C28 PX4 . . . P 2 46.888 132.307 20.109 1 68.11 ? C28 PX4 3003 B 1 
HETATM 26 C C29 PX4 . . . P 2 46.524 133.541 20.884 1 68.32 ? C29 PX4 3003 B 1 
HETATM 27 C C30 PX4 . . . P 2 46.876 133.23 22.351 1 78.9 ? C30 PX4 3003 B 1 
HETATM 28 C C31 PX4 . . . P 2 47.062 134.543 23.153 1 85.66 ? C31 PX4 3003 B 1 
HETATM 29 C C32 PX4 . . . P 2 48.311 134.38 24.057 1 82.14 ? C32 PX4 3003 B 1 
HETATM 30 C C33 PX4 . . . P 2 47.871 133.816 25.449 1 107.46 ? C33 PX4 3003 B 1 
HETATM 31 C C34 PX4 . . . P 2 48.841 132.702 25.877 1 104.93 ? C34 PX4 3003 B 1 
HETATM 32 C C35 PX4 . . . P 2 49.707 133.208 27.057 1 104.1 ? C35 PX4 3003 B 1 
HETATM 33 C C36 PX4 . . . P 2 49.923 132.065 28.037 1 106.57 ? C36 PX4 3003 B 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           33 
#