data_6C1K # _model_server_result.job_id sITKNzyY-jtXETs8hkpvDw _model_server_result.datetime_utc '2024-10-27 14:20:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c1k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":2305}' # _entry.id 6C1K # _exptl.entry_id 6C1K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.07 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GUANIDINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6C1K _cell.length_a 126.394 _cell.length_b 126.235 _cell.length_c 191.525 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C1K _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 126.235 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 176 A GLU 1158 1_555 N NA NA . A NA 1312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc2 A O GLY 200 A GLY 1182 1_555 M NA NA . A NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.171 ? metalc ? metalc3 B OE2 GLU 176 B GLU 2158 1_555 Z NA NA . B NA 2311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc4 B O GLY 200 B GLY 2182 1_555 Y NA NA . B NA 2310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.074 ? # _chem_comp.formula 'C H5 N3' _chem_comp.formula_weight 59.07 _chem_comp.id GAI _chem_comp.mon_nstd_flag . _chem_comp.name GUANIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N1 GAI doub 83 n n C N2 GAI sing 84 n n C N3 GAI sing 85 n n N1 HN1 GAI sing 86 n n N2 HN21 GAI sing 87 n n N2 HN22 GAI sing 88 n n N3 HN31 GAI sing 89 n n N3 HN32 GAI sing 90 n n # _atom_sites.entry_id 6C1K _atom_sites.fract_transf_matrix[1][1] 0.007912 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007922 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005221 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GAI A 1 1301 1301 GAI GAI . D 3 PX4 A 1 1302 1401 PX4 PX4 . E 3 PX4 A 1 1303 1403 PX4 PX4 . F 3 PX4 A 1 1304 1404 PX4 PX4 . G 3 PX4 A 1 1305 1408 PX4 PX4 . H 3 PX4 A 1 1306 1409 PX4 PX4 . I 3 PX4 A 1 1307 2402 PX4 PX4 . J 3 PX4 A 1 1308 2404 PX4 PX4 . K 3 PX4 A 1 1309 2405 PX4 PX4 . L 3 PX4 A 1 1310 2406 PX4 PX4 . M 4 NA A 1 1311 1 NA NA . N 4 NA A 1 1312 1 NA NA . O 5 SO4 A 1 1313 2 SO4 SO4 . P 3 PX4 B 1 2301 1402 PX4 PX4 . Q 3 PX4 B 1 2302 1405 PX4 PX4 . R 3 PX4 B 1 2303 1406 PX4 PX4 . S 3 PX4 B 1 2304 1407 PX4 PX4 . T 2 GAI B 1 2305 2301 GAI GAI . U 3 PX4 B 1 2306 2401 PX4 PX4 . V 3 PX4 B 1 2307 2403 PX4 PX4 . W 3 PX4 B 1 2308 2407 PX4 PX4 . X 3 PX4 B 1 2309 2408 PX4 PX4 . Y 4 NA B 1 2310 1 NA NA . Z 4 NA B 1 2311 1 NA NA . AA 5 SO4 B 1 2312 1 SO4 SO4 . BA 6 HOH A 1 1401 1 HOH HOH . CA 6 HOH B 1 2401 1 HOH HOH . CA 6 HOH B 2 2402 2 HOH HOH . CA 6 HOH B 3 2403 2 HOH HOH . CA 6 HOH B 4 2404 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C GAI . . . T 2 27.578 83.858 16.253 1 114.49 ? C GAI 2305 B 1 HETATM 2 N N1 GAI . . . T 2 28.354 84.139 15.234 1 121.78 ? N1 GAI 2305 B 1 HETATM 3 N N2 GAI . . . T 2 28.162 83.423 17.473 1 112.61 ? N2 GAI 2305 B 1 HETATM 4 N N3 GAI . . . T 2 26.165 83.987 16.13 1 104.92 ? N3 GAI 2305 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 4 #