data_6C1Q
#
_model_server_result.job_id            5DAR82_fRDixZVG0iO4z4A 
_model_server_result.datetime_utc      '2024-11-27 03:05:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6c1q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    6C1Q 
#
_exptl.entry_id    6C1Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              573.681 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(1,3-benzodioxol-5-yl)-~{N}-(1,3-benzodioxol-5-ylmethyl)-~{N}-[(3-butyl-2,5-diphenyl-imidazol-4-yl)methyl]methanamine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.75 
_cell.angle_gamma         90 
_cell.entry_id            6C1Q 
_cell.length_a            62.369 
_cell.length_b            52.558 
_cell.length_c            84.503 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6C1Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 195 B CYS 195 1_555 A SG CYS 274 B CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 A C TRP 229 B TRP 229 1_555 A N YCM 230 B YCM 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C YCM 230 B YCM 230 1_555 A N GLN 231 B GLN 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 B C ACE 1 L ACE 0 1_555 B N PHE 2 L PHE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 B C PHE 2 L PHE 1 1_555 B N ORN 3 L ORN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 B NE ORN 3 L ORN 2 1_555 B C ARG 7 L ARG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale6 B C ORN 3 L ORN 2 1_555 B N PRO 4 L PRO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale7 B C PRO 4 L PRO 3 1_555 B N ZAL 5 L ZAL 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale8 B C ZAL 5 L ZAL 4 1_555 B N TRP 6 L TRP 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C36 H35 N3 O4' 
_chem_comp.formula_weight    573.681 
_chem_comp.id                9P2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(1,3-benzodioxol-5-yl)-~{N}-(1,3-benzodioxol-5-ylmethyl)-~{N}-[(3-butyl-2,5-diphenyl-imidazol-4-yl)methyl]methanamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6C1Q 
_atom_sites.fract_transf_matrix[1][1]    0.016034 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005131 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019027 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012425 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          C 
_pdbx_nonpoly_scheme.entity_id        3 
_pdbx_nonpoly_scheme.mon_id           9P2 
_pdbx_nonpoly_scheme.pdb_strand_id    B 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      501 
_pdbx_nonpoly_scheme.auth_seq_num     1 
_pdbx_nonpoly_scheme.pdb_mon_id       9P2 
_pdbx_nonpoly_scheme.auth_mon_id      NDT 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C15 9P2 . . . C 3 -15.925 28.241 39.572 1 75.23 ? C15 9P2 501 B 1 
HETATM 2 C C16 9P2 . . . C 3 -14.479 28.243 39.48 1 114.18 ? C16 9P2 501 B 1 
HETATM 3 C C17 9P2 . . . C 3 -13.743 27.193 40.029 1 82.04 ? C17 9P2 501 B 1 
HETATM 4 C C18 9P2 . . . C 3 -14.399 26.089 40.691 1 66.2 ? C18 9P2 501 B 1 
HETATM 5 C C20 9P2 . . . C 3 -12.332 28.515 38.951 1 69.46 ? C20 9P2 501 B 1 
HETATM 6 C C01 9P2 . . . C 3 -14.723 28.755 43.517 1 57.14 ? C01 9P2 501 B 1 
HETATM 7 N N02 9P2 . . . C 3 -15.997 29.223 43.244 1 37.75 ? N02 9P2 501 B 1 
HETATM 8 C C03 9P2 . . . C 3 -16.922 28.171 43.335 1 81.18 ? C03 9P2 501 B 1 
HETATM 9 C C04 9P2 . . . C 3 -16.142 27.003 43.692 1 51.12 ? C04 9P2 501 B 1 
HETATM 10 N N05 9P2 . . . C 3 -14.795 27.402 43.771 1 107.27 ? N05 9P2 501 B 1 
HETATM 11 C C06 9P2 . . . C 3 -13.648 26.477 44.137 1 90.71 ? C06 9P2 501 B 1 
HETATM 12 C C07 9P2 . . . C 3 -13.791 26.13 45.63 1 78.74 ? C07 9P2 501 B 1 
HETATM 13 C C08 9P2 . . . C 3 -12.475 26.236 46.418 1 88.39 ? C08 9P2 501 B 1 
HETATM 14 C C09 9P2 . . . C 3 -12.697 26.137 47.933 1 55.87 ? C09 9P2 501 B 1 
HETATM 15 C C10 9P2 . . . C 3 -16.717 25.52 43.885 1 55.13 ? C10 9P2 501 B 1 
HETATM 16 N N11 9P2 . . . C 3 -16.071 24.646 42.829 1 78.06 ? N11 9P2 501 B 1 
HETATM 17 C C12 9P2 . . . C 3 -16.587 24.942 41.466 1 59.64 ? C12 9P2 501 B 1 
HETATM 18 C C13 9P2 . . . C 3 -15.833 26.077 40.779 1 79.83 ? C13 9P2 501 B 1 
HETATM 19 C C14 9P2 . . . C 3 -16.575 27.157 40.217 1 71.86 ? C14 9P2 501 B 1 
HETATM 20 O O19 9P2 . . . C 3 -12.367 27.487 39.78 1 84.31 ? O19 9P2 501 B 1 
HETATM 21 O O21 9P2 . . . C 3 -13.55 29.138 38.926 1 83.4 ? O21 9P2 501 B 1 
HETATM 22 C C22 9P2 . . . C 3 -16.228 23.194 43.153 1 39.13 ? C22 9P2 501 B 1 
HETATM 23 C C23 9P2 . . . C 3 -15.251 22.767 44.273 1 55.27 ? C23 9P2 501 B 1 
HETATM 24 C C24 9P2 . . . C 3 -13.845 22.938 44.11 1 60.98 ? C24 9P2 501 B 1 
HETATM 25 C C25 9P2 . . . C 3 -12.963 22.528 45.182 1 61.44 ? C25 9P2 501 B 1 
HETATM 26 O O26 9P2 . . . C 3 -11.55 22.582 45.29 1 51.74 ? O26 9P2 501 B 1 
HETATM 27 C C27 9P2 . . . C 3 -11.275 22.358 46.692 1 102.72 ? C27 9P2 501 B 1 
HETATM 28 O O28 9P2 . . . C 3 -12.39 21.668 47.229 1 93.02 ? O28 9P2 501 B 1 
HETATM 29 C C29 9P2 . . . C 3 -13.48 21.968 46.37 1 65.31 ? C29 9P2 501 B 1 
HETATM 30 C C30 9P2 . . . C 3 -14.898 21.794 46.537 1 49.28 ? C30 9P2 501 B 1 
HETATM 31 C C31 9P2 . . . C 3 -15.765 22.191 45.496 1 42.26 ? C31 9P2 501 B 1 
HETATM 32 C C32 9P2 . . . C 3 -18.481 28.174 43.13 1 100.76 ? C32 9P2 501 B 1 
HETATM 33 C C33 9P2 . . . C 3 -19.092 28.643 41.939 1 92.16 ? C33 9P2 501 B 1 
HETATM 34 C C34 9P2 . . . C 3 -20.491 28.612 41.802 1 118.27 ? C34 9P2 501 B 1 
HETATM 35 C C35 9P2 . . . C 3 -21.287 28.115 42.835 1 119.67 ? C35 9P2 501 B 1 
HETATM 36 C C36 9P2 . . . C 3 -20.691 27.643 44.02 1 63.95 ? C36 9P2 501 B 1 
HETATM 37 C C37 9P2 . . . C 3 -19.296 27.678 44.152 1 61.13 ? C37 9P2 501 B 1 
HETATM 38 C C38 9P2 . . . C 3 -13.427 29.639 43.482 1 78.03 ? C38 9P2 501 B 1 
HETATM 39 C C39 9P2 . . . C 3 -12.242 29.17 42.918 1 55.22 ? C39 9P2 501 B 1 
HETATM 40 C C40 9P2 . . . C 3 -11.1 29.957 42.862 1 50.87 ? C40 9P2 501 B 1 
HETATM 41 C C41 9P2 . . . C 3 -11.15 31.264 43.364 1 69.66 ? C41 9P2 501 B 1 
HETATM 42 C C42 9P2 . . . C 3 -12.325 31.749 43.905 1 69.21 ? C42 9P2 501 B 1 
HETATM 43 C C43 9P2 . . . C 3 -13.46 30.96 43.959 1 78.91 ? C43 9P2 501 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           43 
#