data_6C25 # _model_server_result.job_id Mp8ihQky7YB4MMjOWP4IAA _model_server_result.datetime_utc '2025-04-24 03:36:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c25 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 6C25 # _exptl.entry_id 6C25 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6C25 _cell.length_a 68.81 _cell.length_b 90.26 _cell.length_c 60.01 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -68.81 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O1A GDP . A GDP 500 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc2 C MG MG . A MG 501 1_555 E O HOH . A HOH 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.955 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6C25 _atom_sites.fract_transf_matrix[1][1] 0.014533 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011079 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016664 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 500 500 GDP GDP . C 3 MG A 1 501 501 MG MG . D 4 CL A 1 502 502 CL CL . E 5 HOH A 1 601 263 HOH HOH . E 5 HOH A 2 602 35 HOH HOH . E 5 HOH A 3 603 17 HOH HOH . E 5 HOH A 4 604 89 HOH HOH . E 5 HOH A 5 605 185 HOH HOH . E 5 HOH A 6 606 286 HOH HOH . E 5 HOH A 7 607 30 HOH HOH . E 5 HOH A 8 608 169 HOH HOH . E 5 HOH A 9 609 110 HOH HOH . E 5 HOH A 10 610 279 HOH HOH . E 5 HOH A 11 611 293 HOH HOH . E 5 HOH A 12 612 85 HOH HOH . E 5 HOH A 13 613 58 HOH HOH . E 5 HOH A 14 614 6 HOH HOH . E 5 HOH A 15 615 299 HOH HOH . E 5 HOH A 16 616 129 HOH HOH . E 5 HOH A 17 617 55 HOH HOH . E 5 HOH A 18 618 31 HOH HOH . E 5 HOH A 19 619 43 HOH HOH . E 5 HOH A 20 620 68 HOH HOH . E 5 HOH A 21 621 117 HOH HOH . E 5 HOH A 22 622 65 HOH HOH . E 5 HOH A 23 623 22 HOH HOH . E 5 HOH A 24 624 54 HOH HOH . E 5 HOH A 25 625 63 HOH HOH . E 5 HOH A 26 626 46 HOH HOH . E 5 HOH A 27 627 48 HOH HOH . E 5 HOH A 28 628 14 HOH HOH . E 5 HOH A 29 629 249 HOH HOH . E 5 HOH A 30 630 7 HOH HOH . E 5 HOH A 31 631 73 HOH HOH . E 5 HOH A 32 632 232 HOH HOH . E 5 HOH A 33 633 324 HOH HOH . E 5 HOH A 34 634 289 HOH HOH . E 5 HOH A 35 635 51 HOH HOH . E 5 HOH A 36 636 82 HOH HOH . E 5 HOH A 37 637 41 HOH HOH . E 5 HOH A 38 638 303 HOH HOH . E 5 HOH A 39 639 253 HOH HOH . E 5 HOH A 40 640 238 HOH HOH . E 5 HOH A 41 641 107 HOH HOH . E 5 HOH A 42 642 40 HOH HOH . E 5 HOH A 43 643 84 HOH HOH . E 5 HOH A 44 644 251 HOH HOH . E 5 HOH A 45 645 49 HOH HOH . E 5 HOH A 46 646 80 HOH HOH . E 5 HOH A 47 647 150 HOH HOH . E 5 HOH A 48 648 90 HOH HOH . E 5 HOH A 49 649 70 HOH HOH . E 5 HOH A 50 650 72 HOH HOH . E 5 HOH A 51 651 208 HOH HOH . E 5 HOH A 52 652 172 HOH HOH . E 5 HOH A 53 653 141 HOH HOH . E 5 HOH A 54 654 62 HOH HOH . E 5 HOH A 55 655 128 HOH HOH . E 5 HOH A 56 656 135 HOH HOH . E 5 HOH A 57 657 24 HOH HOH . E 5 HOH A 58 658 10 HOH HOH . E 5 HOH A 59 659 235 HOH HOH . E 5 HOH A 60 660 261 HOH HOH . E 5 HOH A 61 661 108 HOH HOH . E 5 HOH A 62 662 257 HOH HOH . E 5 HOH A 63 663 36 HOH HOH . E 5 HOH A 64 664 26 HOH HOH . E 5 HOH A 65 665 267 HOH HOH . E 5 HOH A 66 666 310 HOH HOH . E 5 HOH A 67 667 93 HOH HOH . E 5 HOH A 68 668 144 HOH HOH . E 5 HOH A 69 669 114 HOH HOH . E 5 HOH A 70 670 76 HOH HOH . E 5 HOH A 71 671 57 HOH HOH . E 5 HOH A 72 672 158 HOH HOH . E 5 HOH A 73 673 315 HOH HOH . E 5 HOH A 74 674 34 HOH HOH . E 5 HOH A 75 675 233 HOH HOH . E 5 HOH A 76 676 222 HOH HOH . E 5 HOH A 77 677 120 HOH HOH . E 5 HOH A 78 678 124 HOH HOH . E 5 HOH A 79 679 217 HOH HOH . E 5 HOH A 80 680 52 HOH HOH . E 5 HOH A 81 681 192 HOH HOH . E 5 HOH A 82 682 11 HOH HOH . E 5 HOH A 83 683 79 HOH HOH . E 5 HOH A 84 684 38 HOH HOH . E 5 HOH A 85 685 59 HOH HOH . E 5 HOH A 86 686 177 HOH HOH . E 5 HOH A 87 687 112 HOH HOH . E 5 HOH A 88 688 175 HOH HOH . E 5 HOH A 89 689 287 HOH HOH . E 5 HOH A 90 690 102 HOH HOH . E 5 HOH A 91 691 213 HOH HOH . E 5 HOH A 92 692 106 HOH HOH . E 5 HOH A 93 693 25 HOH HOH . E 5 HOH A 94 694 47 HOH HOH . E 5 HOH A 95 695 113 HOH HOH . E 5 HOH A 96 696 305 HOH HOH . E 5 HOH A 97 697 99 HOH HOH . E 5 HOH A 98 698 13 HOH HOH . E 5 HOH A 99 699 86 HOH HOH . E 5 HOH A 100 700 121 HOH HOH . E 5 HOH A 101 701 39 HOH HOH . E 5 HOH A 102 702 100 HOH HOH . E 5 HOH A 103 703 130 HOH HOH . E 5 HOH A 104 704 239 HOH HOH . E 5 HOH A 105 705 265 HOH HOH . E 5 HOH A 106 706 160 HOH HOH . E 5 HOH A 107 707 101 HOH HOH . E 5 HOH A 108 708 197 HOH HOH . E 5 HOH A 109 709 273 HOH HOH . E 5 HOH A 110 710 304 HOH HOH . E 5 HOH A 111 711 78 HOH HOH . E 5 HOH A 112 712 282 HOH HOH . E 5 HOH A 113 713 5 HOH HOH . E 5 HOH A 114 714 45 HOH HOH . E 5 HOH A 115 715 95 HOH HOH . E 5 HOH A 116 716 171 HOH HOH . E 5 HOH A 117 717 60 HOH HOH . E 5 HOH A 118 718 231 HOH HOH . E 5 HOH A 119 719 252 HOH HOH . E 5 HOH A 120 720 12 HOH HOH . E 5 HOH A 121 721 148 HOH HOH . E 5 HOH A 122 722 203 HOH HOH . E 5 HOH A 123 723 15 HOH HOH . E 5 HOH A 124 724 226 HOH HOH . E 5 HOH A 125 725 115 HOH HOH . E 5 HOH A 126 726 225 HOH HOH . E 5 HOH A 127 727 194 HOH HOH . E 5 HOH A 128 728 21 HOH HOH . E 5 HOH A 129 729 258 HOH HOH . E 5 HOH A 130 730 237 HOH HOH . E 5 HOH A 131 731 71 HOH HOH . E 5 HOH A 132 732 37 HOH HOH . E 5 HOH A 133 733 44 HOH HOH . E 5 HOH A 134 734 32 HOH HOH . E 5 HOH A 135 735 56 HOH HOH . E 5 HOH A 136 736 29 HOH HOH . E 5 HOH A 137 737 236 HOH HOH . E 5 HOH A 138 738 75 HOH HOH . E 5 HOH A 139 739 98 HOH HOH . E 5 HOH A 140 740 174 HOH HOH . E 5 HOH A 141 741 91 HOH HOH . E 5 HOH A 142 742 309 HOH HOH . E 5 HOH A 143 743 104 HOH HOH . E 5 HOH A 144 744 313 HOH HOH . E 5 HOH A 145 745 196 HOH HOH . E 5 HOH A 146 746 2 HOH HOH . E 5 HOH A 147 747 201 HOH HOH . E 5 HOH A 148 748 176 HOH HOH . E 5 HOH A 149 749 153 HOH HOH . E 5 HOH A 150 750 67 HOH HOH . E 5 HOH A 151 751 42 HOH HOH . E 5 HOH A 152 752 131 HOH HOH . E 5 HOH A 153 753 240 HOH HOH . E 5 HOH A 154 754 50 HOH HOH . E 5 HOH A 155 755 247 HOH HOH . E 5 HOH A 156 756 33 HOH HOH . E 5 HOH A 157 757 275 HOH HOH . E 5 HOH A 158 758 325 HOH HOH . E 5 HOH A 159 759 193 HOH HOH . E 5 HOH A 160 760 179 HOH HOH . E 5 HOH A 161 761 255 HOH HOH . E 5 HOH A 162 762 228 HOH HOH . E 5 HOH A 163 763 306 HOH HOH . E 5 HOH A 164 764 137 HOH HOH . E 5 HOH A 165 765 230 HOH HOH . E 5 HOH A 166 766 66 HOH HOH . E 5 HOH A 167 767 268 HOH HOH . E 5 HOH A 168 768 69 HOH HOH . E 5 HOH A 169 769 27 HOH HOH . E 5 HOH A 170 770 87 HOH HOH . E 5 HOH A 171 771 272 HOH HOH . E 5 HOH A 172 772 229 HOH HOH . E 5 HOH A 173 773 285 HOH HOH . E 5 HOH A 174 774 276 HOH HOH . E 5 HOH A 175 775 259 HOH HOH . E 5 HOH A 176 776 146 HOH HOH . E 5 HOH A 177 777 294 HOH HOH . E 5 HOH A 178 778 64 HOH HOH . E 5 HOH A 179 779 132 HOH HOH . E 5 HOH A 180 780 270 HOH HOH . E 5 HOH A 181 781 162 HOH HOH . E 5 HOH A 182 782 234 HOH HOH . E 5 HOH A 183 783 298 HOH HOH . E 5 HOH A 184 784 206 HOH HOH . E 5 HOH A 185 785 248 HOH HOH . E 5 HOH A 186 786 184 HOH HOH . E 5 HOH A 187 787 119 HOH HOH . E 5 HOH A 188 788 291 HOH HOH . E 5 HOH A 189 789 277 HOH HOH . E 5 HOH A 190 790 297 HOH HOH . E 5 HOH A 191 791 274 HOH HOH . E 5 HOH A 192 792 188 HOH HOH . E 5 HOH A 193 793 133 HOH HOH . E 5 HOH A 194 794 154 HOH HOH . E 5 HOH A 195 795 167 HOH HOH . E 5 HOH A 196 796 94 HOH HOH . E 5 HOH A 197 797 214 HOH HOH . E 5 HOH A 198 798 254 HOH HOH . E 5 HOH A 199 799 152 HOH HOH . E 5 HOH A 200 800 308 HOH HOH . E 5 HOH A 201 801 83 HOH HOH . E 5 HOH A 202 802 260 HOH HOH . E 5 HOH A 203 803 142 HOH HOH . E 5 HOH A 204 804 295 HOH HOH . E 5 HOH A 205 805 278 HOH HOH . E 5 HOH A 206 806 200 HOH HOH . E 5 HOH A 207 807 156 HOH HOH . E 5 HOH A 208 808 182 HOH HOH . E 5 HOH A 209 809 127 HOH HOH . E 5 HOH A 210 810 250 HOH HOH . E 5 HOH A 211 811 157 HOH HOH . E 5 HOH A 212 812 183 HOH HOH . E 5 HOH A 213 813 88 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -20.586 _atom_site.Cartn_y -5.334 _atom_site.Cartn_z -18.724 _atom_site.occupancy 0.88 _atom_site.B_iso_or_equiv 29.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #