data_6C2R
#
_model_server_result.job_id            rRbz6CVxtZHmK42VvezJ0w 
_model_server_result.datetime_utc      '2024-12-27 01:46:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6c2r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    6C2R 
#
_exptl.entry_id    6C2R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              489.945 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R,4R)-1-[(3-chloro-2-fluorophenyl)methyl]-4-({3-fluoro-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyridin-2-yl}methyl)-2-methylpiperidine-4-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6C2R 
_cell.length_a            83.598 
_cell.length_b            83.598 
_cell.length_c            76.159 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6C2R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_735 y+2,x-2,-z 0 1 0 1 0 0 0 0 -1 167.196 -167.196 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C24 H26 Cl F2 N5 O2' 
_chem_comp.formula_weight    489.945 
_chem_comp.id                EG7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R,4R)-1-[(3-chloro-2-fluorophenyl)methyl]-4-({3-fluoro-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyridin-2-yl}methyl)-2-methylpiperidine-4-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N27 N26 EG7 sing 83 n y 
N27 C12 EG7 sing 84 n y 
N26 C14 EG7 doub 85 n y 
C21 C12 EG7 sing 86 n n 
CL1 C10 EG7 sing 87 n n 
C12 C6 EG7 doub 88 n y 
C14 C6 EG7 sing 89 n y 
C14 N29 EG7 sing 90 n n 
C10 C4 EG7 doub 91 n y 
C10 C9 EG7 sing 92 n y 
C4 C1 EG7 sing 93 n y 
N29 C13 EG7 sing 94 n n 
F33 C9 EG7 sing 95 n n 
C9 C7 EG7 doub 96 n y 
C1 C2 EG7 doub 97 n y 
C13 C5 EG7 doub 98 n y 
C13 N25 EG7 sing 99 n y 
C5 C3 EG7 sing 100 n y 
C7 C2 EG7 sing 101 n y 
C7 C23 EG7 sing 102 n n 
N25 C11 EG7 doub 103 n y 
C18 C16 EG7 sing 104 n n 
C18 N28 EG7 sing 105 n n 
C23 N28 EG7 sing 106 n n 
C3 C8 EG7 doub 107 n y 
C11 C8 EG7 sing 108 n y 
C11 C24 EG7 sing 109 n n 
C16 C20 EG7 sing 110 n n 
N28 C19 EG7 sing 111 n n 
C8 F32 EG7 sing 112 n n 
C24 C20 EG7 sing 113 n n 
C20 C17 EG7 sing 114 n n 
C20 C15 EG7 sing 115 n n 
C19 C17 EG7 sing 116 n n 
C19 C22 EG7 sing 117 n n 
O31 C15 EG7 sing 118 n n 
C15 O30 EG7 doub 119 n n 
C6 H40 EG7 sing 120 n n 
C1 H35 EG7 sing 121 n n 
C5 H39 EG7 sing 122 n n 
C4 H38 EG7 sing 123 n n 
C3 H37 EG7 sing 124 n n 
C2 H36 EG7 sing 125 n n 
C16 H41 EG7 sing 126 n n 
C16 H42 EG7 sing 127 n n 
C17 H44 EG7 sing 128 n n 
C17 H43 EG7 sing 129 n n 
C18 H45 EG7 sing 130 n n 
C18 H46 EG7 sing 131 n n 
C19 H47 EG7 sing 132 n n 
C21 H49 EG7 sing 133 n n 
C21 H48 EG7 sing 134 n n 
C21 H50 EG7 sing 135 n n 
C22 H51 EG7 sing 136 n n 
C22 H52 EG7 sing 137 n n 
C22 H53 EG7 sing 138 n n 
C23 H55 EG7 sing 139 n n 
C23 H54 EG7 sing 140 n n 
C24 H57 EG7 sing 141 n n 
C24 H56 EG7 sing 142 n n 
N27 H58 EG7 sing 143 n n 
N29 H59 EG7 sing 144 n n 
O31 H60 EG7 sing 145 n n 
#
_atom_sites.entry_id                     6C2R 
_atom_sites.fract_transf_matrix[1][1]    0.011962 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011962 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01313 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 401 1 SO4 SO4 . 
C 2 SO4 A 1 402 2 SO4 SO4 . 
D 2 SO4 A 1 403 3 SO4 SO4 . 
E 3 EG7 A 1 404 1 EG7 SX1 . 
F 4 HOH A 1 501 50 HOH HOH . 
F 4 HOH A 2 502 11 HOH HOH . 
F 4 HOH A 3 503 36 HOH HOH . 
F 4 HOH A 4 504 53 HOH HOH . 
F 4 HOH A 5 505 22 HOH HOH . 
F 4 HOH A 6 506 86 HOH HOH . 
F 4 HOH A 7 507 30 HOH HOH . 
F 4 HOH A 8 508 37 HOH HOH . 
F 4 HOH A 9 509 17 HOH HOH . 
F 4 HOH A 10 510 49 HOH HOH . 
F 4 HOH A 11 511 20 HOH HOH . 
F 4 HOH A 12 512 85 HOH HOH . 
F 4 HOH A 13 513 9 HOH HOH . 
F 4 HOH A 14 514 15 HOH HOH . 
F 4 HOH A 15 515 16 HOH HOH . 
F 4 HOH A 16 516 101 HOH HOH . 
F 4 HOH A 17 517 96 HOH HOH . 
F 4 HOH A 18 518 69 HOH HOH . 
F 4 HOH A 19 519 91 HOH HOH . 
F 4 HOH A 20 520 57 HOH HOH . 
F 4 HOH A 21 521 35 HOH HOH . 
F 4 HOH A 22 522 54 HOH HOH . 
F 4 HOH A 23 523 38 HOH HOH . 
F 4 HOH A 24 524 95 HOH HOH . 
F 4 HOH A 25 525 59 HOH HOH . 
F 4 HOH A 26 526 72 HOH HOH . 
F 4 HOH A 27 527 2 HOH HOH . 
F 4 HOH A 28 528 94 HOH HOH . 
F 4 HOH A 29 529 4 HOH HOH . 
F 4 HOH A 30 530 7 HOH HOH . 
F 4 HOH A 31 531 100 HOH HOH . 
F 4 HOH A 32 532 87 HOH HOH . 
F 4 HOH A 33 533 105 HOH HOH . 
F 4 HOH A 34 534 79 HOH HOH . 
F 4 HOH A 35 535 61 HOH HOH . 
F 4 HOH A 36 536 5 HOH HOH . 
F 4 HOH A 37 537 31 HOH HOH . 
F 4 HOH A 38 538 62 HOH HOH . 
F 4 HOH A 39 539 34 HOH HOH . 
F 4 HOH A 40 540 27 HOH HOH . 
F 4 HOH A 41 541 10 HOH HOH . 
F 4 HOH A 42 542 97 HOH HOH . 
F 4 HOH A 43 543 92 HOH HOH . 
F 4 HOH A 44 544 102 HOH HOH . 
F 4 HOH A 45 545 12 HOH HOH . 
F 4 HOH A 46 546 33 HOH HOH . 
F 4 HOH A 47 547 1 HOH HOH . 
F 4 HOH A 48 548 106 HOH HOH . 
F 4 HOH A 49 549 43 HOH HOH . 
F 4 HOH A 50 550 84 HOH HOH . 
F 4 HOH A 51 551 44 HOH HOH . 
F 4 HOH A 52 552 73 HOH HOH . 
F 4 HOH A 53 553 19 HOH HOH . 
F 4 HOH A 54 554 78 HOH HOH . 
F 4 HOH A 55 555 103 HOH HOH . 
F 4 HOH A 56 556 98 HOH HOH . 
F 4 HOH A 57 557 88 HOH HOH . 
F 4 HOH A 58 558 82 HOH HOH . 
F 4 HOH A 59 559 23 HOH HOH . 
F 4 HOH A 60 560 39 HOH HOH . 
F 4 HOH A 61 561 67 HOH HOH . 
F 4 HOH A 62 562 24 HOH HOH . 
F 4 HOH A 63 563 52 HOH HOH . 
F 4 HOH A 64 564 18 HOH HOH . 
F 4 HOH A 65 565 93 HOH HOH . 
F 4 HOH A 66 566 47 HOH HOH . 
F 4 HOH A 67 567 21 HOH HOH . 
F 4 HOH A 68 568 45 HOH HOH . 
F 4 HOH A 69 569 83 HOH HOH . 
F 4 HOH A 70 570 32 HOH HOH . 
F 4 HOH A 71 571 55 HOH HOH . 
F 4 HOH A 72 572 29 HOH HOH . 
F 4 HOH A 73 573 74 HOH HOH . 
F 4 HOH A 74 574 104 HOH HOH . 
F 4 HOH A 75 575 99 HOH HOH . 
F 4 HOH A 76 576 26 HOH HOH . 
F 4 HOH A 77 577 28 HOH HOH . 
F 4 HOH A 78 578 68 HOH HOH . 
F 4 HOH A 79 579 89 HOH HOH . 
F 4 HOH A 80 580 42 HOH HOH . 
F 4 HOH A 81 581 8 HOH HOH . 
F 4 HOH A 82 582 13 HOH HOH . 
F 4 HOH A 83 583 76 HOH HOH . 
F 4 HOH A 84 584 71 HOH HOH . 
F 4 HOH A 85 585 90 HOH HOH . 
F 4 HOH A 86 586 40 HOH HOH . 
F 4 HOH A 87 587 77 HOH HOH . 
F 4 HOH A 88 588 56 HOH HOH . 
F 4 HOH A 89 589 75 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 EG7 . . . E 3 112.494 -20.156 5.391 1 45.56 ? C7 EG7 404 A 1 
HETATM 2 C C6 EG7 . . . E 3 109.819 -16.251 3.005 1 31.49 ? C6 EG7 404 A 1 
HETATM 3 C C1 EG7 . . . E 3 111.995 -22.262 4.291 1 45.28 ? C1 EG7 404 A 1 
HETATM 4 C C5 EG7 . . . E 3 106.489 -14.159 5.354 1 34 ? C5 EG7 404 A 1 
HETATM 5 C C4 EG7 . . . E 3 112.489 -21.736 3.092 1 46.98 ? C4 EG7 404 A 1 
HETATM 6 C C3 EG7 . . . E 3 106.438 -13.837 6.708 1 34.51 ? C3 EG7 404 A 1 
HETATM 7 C C2 EG7 . . . E 3 111.996 -21.474 5.45 1 45.95 ? C2 EG7 404 A 1 
HETATM 8 C C8 EG7 . . . E 3 107.427 -14.336 7.554 1 36.33 ? C8 EG7 404 A 1 
HETATM 9 C C9 EG7 . . . E 3 113.001 -19.649 4.2 1 48.05 ? C9 EG7 404 A 1 
HETATM 10 C C10 EG7 . . . E 3 113.004 -20.442 3.058 1 51.51 ? C10 EG7 404 A 1 
HETATM 11 C C11 EG7 . . . E 3 108.423 -15.168 7.028 1 35.84 ? C11 EG7 404 A 1 
HETATM 12 C C12 EG7 . . . E 3 110.358 -16.65 1.763 1 30.67 ? C12 EG7 404 A 1 
HETATM 13 C C13 EG7 . . . E 3 107.523 -15.002 4.919 1 33.09 ? C13 EG7 404 A 1 
HETATM 14 C C14 EG7 . . . E 3 108.573 -15.76 2.682 1 31.34 ? C14 EG7 404 A 1 
HETATM 15 C C15 EG7 . . . E 3 107.882 -17.24 9.274 1 40.59 ? C15 EG7 404 A 1 
HETATM 16 C C16 EG7 . . . E 3 108.966 -18.158 7.135 1 36.89 ? C16 EG7 404 A 1 
HETATM 17 C C17 EG7 . . . E 3 110.224 -17.833 9.246 1 36.71 ? C17 EG7 404 A 1 
HETATM 18 C C18 EG7 . . . E 3 110.285 -18.468 6.419 1 35.6 ? C18 EG7 404 A 1 
HETATM 19 C C19 EG7 . . . E 3 111.538 -18.238 8.547 1 38.8 ? C19 EG7 404 A 1 
HETATM 20 C C20 EG7 . . . E 3 109.118 -17.231 8.355 1 37.33 ? C20 EG7 404 A 1 
HETATM 21 C C21 EG7 . . . E 3 111.684 -17.236 1.45 1 28.57 ? C21 EG7 404 A 1 
HETATM 22 C C22 EG7 . . . E 3 112.36 -18.979 9.613 1 42.12 ? C22 EG7 404 A 1 
HETATM 23 C C23 EG7 . . . E 3 112.566 -19.265 6.598 1 41.59 ? C23 EG7 404 A 1 
HETATM 24 C C24 EG7 . . . E 3 109.458 -15.783 7.944 1 37.14 ? C24 EG7 404 A 1 
HETATM 25 N N25 EG7 . . . E 3 108.493 -15.507 5.716 1 31.41 ? N25 EG7 404 A 1 
HETATM 26 N N26 EG7 . . . E 3 108.459 -15.874 1.344 1 29.92 ? N26 EG7 404 A 1 
HETATM 27 N N27 EG7 . . . E 3 109.526 -16.419 0.755 1 32.97 ? N27 EG7 404 A 1 
HETATM 28 N N28 EG7 . . . E 3 111.307 -19.047 7.321 1 38.3 ? N28 EG7 404 A 1 
HETATM 29 N N29 EG7 . . . E 3 107.579 -15.281 3.54 1 33.23 ? N29 EG7 404 A 1 
HETATM 30 O O30 EG7 . . . E 3 107.956 -17.194 10.495 1 45.67 ? O30 EG7 404 A 1 
HETATM 31 O O31 EG7 . . . E 3 106.657 -17.315 8.683 1 36.82 ? O31 EG7 404 A 1 
HETATM 32 F F32 EG7 . . . E 3 107.37 -14.076 8.855 1 38.37 ? F32 EG7 404 A 1 
HETATM 33 F F33 EG7 . . . E 3 113.453 -18.377 4.17 1 49.32 ? F33 EG7 404 A 1 
HETATM 34 CL CL1 EG7 . . . E 3 113.685 -19.817 1.61 1 62.05 ? CL1 EG7 404 A 1 
HETATM 35 H H40 EG7 . . . E 3 110.366 -16.187 3.935 1 31.17 ? H40 EG7 404 A 1 
HETATM 36 H H35 EG7 . . . E 3 111.611 -23.276 4.322 1 45.42 ? H35 EG7 404 A 1 
HETATM 37 H H39 EG7 . . . E 3 105.715 -13.802 4.683 1 34.05 ? H39 EG7 404 A 1 
HETATM 38 H H38 EG7 . . . E 3 112.513 -22.367 2.207 1 46.78 ? H38 EG7 404 A 1 
HETATM 39 H H37 EG7 . . . E 3 105.513 -13.465 7.134 1 35.1 ? H37 EG7 404 A 1 
HETATM 40 H H36 EG7 . . . E 3 111.593 -21.88 6.376 1 45.49 ? H36 EG7 404 A 1 
HETATM 41 H H41 EG7 . . . E 3 108.527 -19.112 7.465 1 37.23 ? H41 EG7 404 A 1 
HETATM 42 H H42 EG7 . . . E 3 108.257 -17.748 6.404 1 36.34 ? H42 EG7 404 A 1 
HETATM 43 H H44 EG7 . . . E 3 109.825 -18.726 9.75 1 36.94 ? H44 EG7 404 A 1 
HETATM 44 H H43 EG7 . . . E 3 110.447 -17.128 10.057 1 36.83 ? H43 EG7 404 A 1 
HETATM 45 H H45 EG7 . . . E 3 110.669 -17.573 5.916 1 34.93 ? H45 EG7 404 A 1 
HETATM 46 H H46 EG7 . . . E 3 110.034 -19.189 5.632 1 34.65 ? H46 EG7 404 A 1 
HETATM 47 H H47 EG7 . . . E 3 112.089 -17.324 8.29 1 38.99 ? H47 EG7 404 A 1 
HETATM 48 H H49 EG7 . . . E 3 112.086 -16.873 0.493 1 28.18 ? H49 EG7 404 A 1 
HETATM 49 H H48 EG7 . . . E 3 111.619 -18.333 1.39 1 27.94 ? H48 EG7 404 A 1 
HETATM 50 H H50 EG7 . . . E 3 112.432 -16.983 2.216 1 28.54 ? H50 EG7 404 A 1 
HETATM 51 H H51 EG7 . . . E 3 111.954 -19.978 9.742 1 42.13 ? H51 EG7 404 A 1 
HETATM 52 H H52 EG7 . . . E 3 112.302 -18.441 10.555 1 42.89 ? H52 EG7 404 A 1 
HETATM 53 H H53 EG7 . . . E 3 113.401 -19.045 9.313 1 41.9 ? H53 EG7 404 A 1 
HETATM 54 H H55 EG7 . . . E 3 112.953 -18.278 6.322 1 41.34 ? H55 EG7 404 A 1 
HETATM 55 H H54 EG7 . . . E 3 113.298 -19.701 7.28 1 41.74 ? H54 EG7 404 A 1 
HETATM 56 H H57 EG7 . . . E 3 109.552 -15.18 8.849 1 37.89 ? H57 EG7 404 A 1 
HETATM 57 H H56 EG7 . . . E 3 110.442 -15.768 7.467 1 36.82 ? H56 EG7 404 A 1 
HETATM 58 H H58 EG7 . . . E 3 109.574 -16.546 -0.252 1 34.18 ? H58 EG7 404 A 1 
HETATM 59 H H59 EG7 . . . E 3 106.671 -15.228 3.097 1 33.96 ? H59 EG7 404 A 1 
HETATM 60 H H60 EG7 . . . E 3 106.626 -16.936 7.789 1 36.26 ? H60 EG7 404 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           60 
#