data_6C3P # _model_server_result.job_id UEVs3Zhp2PtvF_RQeWZdug _model_server_result.datetime_utc '2024-11-22 22:26:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c3p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":2002}' # _entry.id 6C3P # _exptl.entry_id 6C3P _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6C3P _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C3P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 N N N ? 5 O N N ? 5 R N N ? 5 S N N ? 5 V N N ? 5 W N N ? 5 Z N N ? 5 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 116 A CYS 110 1_555 A SG CYS 148 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf2 B SG CYS 116 D CYS 110 1_555 B SG CYS 148 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 C SG CYS 116 B CYS 110 1_555 C SG CYS 148 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf4 D SG CYS 116 C CYS 110 1_555 D SG CYS 148 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 F SG CYS 6 H CYS 6 1_555 F SG CYS 26 H CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 G SG CYS 6 G CYS 6 1_555 G SG CYS 26 G CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 H SG CYS 6 F CYS 6 1_555 H SG CYS 26 F CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 E OG SER 720 E SER 720 1_555 N MG MG . E MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc2 E OE1 GLN 774 E GLN 774 1_555 N MG MG . E MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc3 M O3B ADP . E ADP 2001 1_555 O MG MG . E MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc4 N MG MG . E MG 2002 1_555 P O2B ATP . E ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc5 N MG MG . E MG 2002 1_555 P O3B ATP . E ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc6 N MG MG . E MG 2002 1_555 P O3A ATP . E ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc7 F OG SER 720 H SER 720 1_555 R MG MG . H MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc8 F OE1 GLN 774 H GLN 774 1_555 R MG MG . H MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc9 Q O3B ADP . H ADP 2001 1_555 S MG MG . H MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc10 R MG MG . H MG 2002 1_555 T O2B ATP . H ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc11 R MG MG . H MG 2002 1_555 T O3B ATP . H ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc12 R MG MG . H MG 2002 1_555 T O3A ATP . H ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc13 G OG SER 720 G SER 720 1_555 V MG MG . G MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc14 G OE1 GLN 774 G GLN 774 1_555 V MG MG . G MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc15 U O3B ADP . G ADP 2001 1_555 W MG MG . G MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc16 V MG MG . G MG 2002 1_555 X O3B ATP . G ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc17 V MG MG . G MG 2002 1_555 X O2B ATP . G ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc18 V MG MG . G MG 2002 1_555 X O3A ATP . G ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc19 H OG SER 720 F SER 720 1_555 Z MG MG . F MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc20 H OE1 GLN 774 F GLN 774 1_555 Z MG MG . F MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc21 Y O3B ADP . F ADP 2001 1_555 AA MG MG . F MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc22 Z MG MG . F MG 2002 1_555 BA O3B ATP . F ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc23 Z MG MG . F MG 2002 1_555 BA O2B ATP . F ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc24 Z MG MG . F MG 2002 1_555 BA O3A ATP . F ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6C3P _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ATP A 1 501 1 ATP ATP . J 3 ATP A 1 502 4 ATP ATP . K 3 ATP D 1 501 3 ATP ATP . L 3 ATP C 1 501 2 ATP ATP . M 4 ADP E 1 2001 2001 ADP ADP . N 5 MG E 1 2002 2002 MG MG . O 5 MG E 1 2003 2003 MG MG . P 3 ATP E 1 2004 2004 ATP ATP . Q 4 ADP H 1 2001 2001 ADP ADP . R 5 MG H 1 2002 2002 MG MG . S 5 MG H 1 2003 2003 MG MG . T 3 ATP H 1 2004 2004 ATP ATP . U 4 ADP G 1 2001 2001 ADP ADP . V 5 MG G 1 2002 2002 MG MG . W 5 MG G 1 2003 2003 MG MG . X 3 ATP G 1 2004 2004 ATP ATP . Y 4 ADP F 1 2001 2001 ADP ADP . Z 5 MG F 1 2002 2002 MG MG . AA 5 MG F 1 2003 2003 MG MG . BA 3 ATP F 1 2004 2004 ATP ATP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 5 _atom_site.Cartn_x 123.692 _atom_site.Cartn_y 233.299 _atom_site.Cartn_z 151.1 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 151.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 2002 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 83 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #