data_6C4K # _model_server_result.job_id nR5h1a8klQ1qUOTJ7boRjA _model_server_result.datetime_utc '2024-11-07 22:09:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 6C4K # _exptl.entry_id 6C4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.5 _cell.angle_gamma 90 _cell.entry_id 6C4K _cell.length_a 178.52 _cell.length_b 114.47 _cell.length_c 96.88 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 A,B,C,D,E,F,G,H,I,J 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6C4K _atom_sites.fract_transf_matrix[1][1] 0.005602 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002792 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008736 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PO4 A 1 501 82 PO4 PO4 . E 3 NA B 1 501 57 NA NA . F 2 PO4 B 1 502 81 PO4 PO4 . G 2 PO4 C 1 501 80 PO4 PO4 . H 4 HOH A 1 601 13 HOH HOH . H 4 HOH A 2 602 36 HOH HOH . H 4 HOH A 3 603 14 HOH HOH . H 4 HOH A 4 604 66 HOH HOH . H 4 HOH A 5 605 16 HOH HOH . H 4 HOH A 6 606 15 HOH HOH . H 4 HOH A 7 607 72 HOH HOH . H 4 HOH A 8 608 47 HOH HOH . H 4 HOH A 9 609 18 HOH HOH . H 4 HOH A 10 610 84 HOH HOH . H 4 HOH A 11 611 71 HOH HOH . H 4 HOH A 12 612 78 HOH HOH . H 4 HOH A 13 613 50 HOH HOH . H 4 HOH A 14 614 76 HOH HOH . H 4 HOH A 15 615 61 HOH HOH . H 4 HOH A 16 616 24 HOH HOH . H 4 HOH A 17 617 53 HOH HOH . H 4 HOH A 18 618 73 HOH HOH . H 4 HOH A 19 619 65 HOH HOH . H 4 HOH A 20 620 59 HOH HOH . I 4 HOH B 1 601 17 HOH HOH . I 4 HOH B 2 602 10 HOH HOH . I 4 HOH B 3 603 60 HOH HOH . I 4 HOH B 4 604 79 HOH HOH . I 4 HOH B 5 605 26 HOH HOH . I 4 HOH B 6 606 6 HOH HOH . I 4 HOH B 7 607 9 HOH HOH . I 4 HOH B 8 608 30 HOH HOH . I 4 HOH B 9 609 34 HOH HOH . I 4 HOH B 10 610 31 HOH HOH . I 4 HOH B 11 611 49 HOH HOH . I 4 HOH B 12 612 52 HOH HOH . I 4 HOH B 13 613 2 HOH HOH . I 4 HOH B 14 614 37 HOH HOH . I 4 HOH B 15 615 7 HOH HOH . I 4 HOH B 16 616 28 HOH HOH . I 4 HOH B 17 617 56 HOH HOH . I 4 HOH B 18 618 45 HOH HOH . I 4 HOH B 19 619 38 HOH HOH . I 4 HOH B 20 620 25 HOH HOH . I 4 HOH B 21 621 19 HOH HOH . I 4 HOH B 22 622 11 HOH HOH . I 4 HOH B 23 623 54 HOH HOH . I 4 HOH B 24 624 46 HOH HOH . I 4 HOH B 25 625 68 HOH HOH . I 4 HOH B 26 626 1 HOH HOH . I 4 HOH B 27 627 70 HOH HOH . I 4 HOH B 28 628 74 HOH HOH . I 4 HOH B 29 629 51 HOH HOH . I 4 HOH B 30 630 29 HOH HOH . I 4 HOH B 31 631 27 HOH HOH . I 4 HOH B 32 632 32 HOH HOH . I 4 HOH B 33 633 75 HOH HOH . I 4 HOH B 34 634 83 HOH HOH . I 4 HOH B 35 635 40 HOH HOH . I 4 HOH B 36 636 8 HOH HOH . I 4 HOH B 37 637 23 HOH HOH . I 4 HOH B 38 638 85 HOH HOH . I 4 HOH B 39 639 63 HOH HOH . J 4 HOH C 1 601 64 HOH HOH . J 4 HOH C 2 602 69 HOH HOH . J 4 HOH C 3 603 44 HOH HOH . J 4 HOH C 4 604 5 HOH HOH . J 4 HOH C 5 605 12 HOH HOH . J 4 HOH C 6 606 33 HOH HOH . J 4 HOH C 7 607 58 HOH HOH . J 4 HOH C 8 608 48 HOH HOH . J 4 HOH C 9 609 4 HOH HOH . J 4 HOH C 10 610 62 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -22.271 _atom_site.Cartn_y 5.027 _atom_site.Cartn_z -7.992 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 82.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #