data_6C71 # _model_server_result.job_id 4Vzml1RReLYlLq0R2IXJBA _model_server_result.datetime_utc '2024-11-22 06:23:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c71 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":501}' # _entry.id 6C71 # _exptl.entry_id 6C71 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 162.232 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6C71 _cell.length_a 86.763 _cell.length_b 135.105 _cell.length_c 167.731 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C71 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,I,J,O 2 1 D,K,L,P 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_564 -x+1/2,-y+1,z-1/2 -1 0 0 0 -1 0 0 0 1 43.3815 135.105 -83.8655 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C10 H14 N2' _chem_comp.formula_weight 162.232 _chem_comp.id NCT _chem_comp.mon_nstd_flag . _chem_comp.name (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(S)-(-)-NICOTINE;3-[(2S)-1-METHYL-2-PYRROLIDINYL] PYRIDINE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 NCT doub 328 n y N1 C5 NCT sing 329 n y C1 C2 NCT sing 330 n y C1 HC1 NCT sing 331 n n C2 C3 NCT doub 332 n y C2 C6 NCT sing 333 n n C3 C4 NCT sing 334 n y C3 HC3 NCT sing 335 n n C4 C5 NCT doub 336 n y C4 HC4 NCT sing 337 n n C5 HC5 NCT sing 338 n n N2 C6 NCT sing 339 n n N2 C9 NCT sing 340 n n N2 C10 NCT sing 341 n n C6 C7 NCT sing 342 n n C6 HC6 NCT sing 343 n n C7 C8 NCT sing 344 n n C7 HC71 NCT sing 345 n n C7 HC72 NCT sing 346 n n C8 C9 NCT sing 347 n n C8 HC81 NCT sing 348 n n C8 HC82 NCT sing 349 n n C9 HC91 NCT sing 350 n n C9 HC92 NCT sing 351 n n C10 H101 NCT sing 352 n n C10 H102 NCT sing 353 n n C10 H103 NCT sing 354 n n # _atom_sites.entry_id 6C71 _atom_sites.fract_transf_matrix[1][1] 0.011526 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007402 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NCT A 1 501 2 NCT NCT . F 3 FAD A 1 502 1 FAD FVN . G 2 NCT B 1 501 3 NCT NCT . H 3 FAD B 1 502 2 FAD FVN . I 2 NCT C 1 501 4 NCT NCT . J 3 FAD C 1 502 3 FAD FVN . K 2 NCT D 1 501 1 NCT NCT . L 3 FAD D 1 502 4 FAD FVN . M 4 HOH A 1 601 80 HOH HOH . M 4 HOH A 2 602 76 HOH HOH . M 4 HOH A 3 603 44 HOH HOH . M 4 HOH A 4 604 73 HOH HOH . M 4 HOH A 5 605 26 HOH HOH . M 4 HOH A 6 606 2 HOH HOH . M 4 HOH A 7 607 82 HOH HOH . M 4 HOH A 8 608 78 HOH HOH . M 4 HOH A 9 609 7 HOH HOH . M 4 HOH A 10 610 75 HOH HOH . M 4 HOH A 11 611 61 HOH HOH . M 4 HOH A 12 612 25 HOH HOH . M 4 HOH A 13 613 3 HOH HOH . M 4 HOH A 14 614 1 HOH HOH . M 4 HOH A 15 615 77 HOH HOH . M 4 HOH A 16 616 81 HOH HOH . M 4 HOH A 17 617 37 HOH HOH . M 4 HOH A 18 618 33 HOH HOH . M 4 HOH A 19 619 74 HOH HOH . M 4 HOH A 20 620 30 HOH HOH . M 4 HOH A 21 621 79 HOH HOH . M 4 HOH A 22 622 58 HOH HOH . M 4 HOH A 23 623 23 HOH HOH . M 4 HOH A 24 624 27 HOH HOH . M 4 HOH A 25 625 17 HOH HOH . M 4 HOH A 26 626 63 HOH HOH . M 4 HOH A 27 627 24 HOH HOH . M 4 HOH A 28 628 21 HOH HOH . N 4 HOH B 1 601 34 HOH HOH . N 4 HOH B 2 602 83 HOH HOH . N 4 HOH B 3 603 62 HOH HOH . N 4 HOH B 4 604 86 HOH HOH . N 4 HOH B 5 605 88 HOH HOH . N 4 HOH B 6 606 36 HOH HOH . N 4 HOH B 7 607 32 HOH HOH . N 4 HOH B 8 608 11 HOH HOH . N 4 HOH B 9 609 51 HOH HOH . N 4 HOH B 10 610 4 HOH HOH . N 4 HOH B 11 611 90 HOH HOH . N 4 HOH B 12 612 92 HOH HOH . N 4 HOH B 13 613 85 HOH HOH . N 4 HOH B 14 614 49 HOH HOH . N 4 HOH B 15 615 89 HOH HOH . N 4 HOH B 16 616 28 HOH HOH . N 4 HOH B 17 617 8 HOH HOH . N 4 HOH B 18 618 91 HOH HOH . N 4 HOH B 19 619 93 HOH HOH . N 4 HOH B 20 620 39 HOH HOH . N 4 HOH B 21 621 84 HOH HOH . N 4 HOH B 22 622 53 HOH HOH . N 4 HOH B 23 623 14 HOH HOH . N 4 HOH B 24 624 87 HOH HOH . O 4 HOH C 1 601 104 HOH HOH . O 4 HOH C 2 602 55 HOH HOH . O 4 HOH C 3 603 9 HOH HOH . O 4 HOH C 4 604 54 HOH HOH . O 4 HOH C 5 605 60 HOH HOH . O 4 HOH C 6 606 99 HOH HOH . O 4 HOH C 7 607 96 HOH HOH . O 4 HOH C 8 608 98 HOH HOH . O 4 HOH C 9 609 103 HOH HOH . O 4 HOH C 10 610 12 HOH HOH . O 4 HOH C 11 611 45 HOH HOH . O 4 HOH C 12 612 101 HOH HOH . O 4 HOH C 13 613 105 HOH HOH . O 4 HOH C 14 614 94 HOH HOH . O 4 HOH C 15 615 15 HOH HOH . O 4 HOH C 16 616 5 HOH HOH . O 4 HOH C 17 617 16 HOH HOH . O 4 HOH C 18 618 29 HOH HOH . O 4 HOH C 19 619 97 HOH HOH . O 4 HOH C 20 620 10 HOH HOH . O 4 HOH C 21 621 102 HOH HOH . O 4 HOH C 22 622 50 HOH HOH . O 4 HOH C 23 623 100 HOH HOH . O 4 HOH C 24 624 48 HOH HOH . O 4 HOH C 25 625 19 HOH HOH . O 4 HOH C 26 626 41 HOH HOH . O 4 HOH C 27 627 18 HOH HOH . O 4 HOH C 28 628 64 HOH HOH . O 4 HOH C 29 629 95 HOH HOH . O 4 HOH C 30 630 20 HOH HOH . O 4 HOH C 31 631 59 HOH HOH . O 4 HOH C 32 632 43 HOH HOH . O 4 HOH C 33 633 47 HOH HOH . O 4 HOH C 34 634 52 HOH HOH . O 4 HOH C 35 635 40 HOH HOH . O 4 HOH C 36 636 38 HOH HOH . O 4 HOH C 37 637 46 HOH HOH . O 4 HOH C 38 638 42 HOH HOH . P 4 HOH D 1 601 67 HOH HOH . P 4 HOH D 2 602 31 HOH HOH . P 4 HOH D 3 603 71 HOH HOH . P 4 HOH D 4 604 65 HOH HOH . P 4 HOH D 5 605 70 HOH HOH . P 4 HOH D 6 606 56 HOH HOH . P 4 HOH D 7 607 66 HOH HOH . P 4 HOH D 8 608 69 HOH HOH . P 4 HOH D 9 609 68 HOH HOH . P 4 HOH D 10 610 6 HOH HOH . P 4 HOH D 11 611 35 HOH HOH . P 4 HOH D 12 612 72 HOH HOH . P 4 HOH D 13 613 22 HOH HOH . P 4 HOH D 14 614 57 HOH HOH . P 4 HOH D 15 615 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NCT . . . I 2 32.581 94.593 47.208 1 50.14 ? N1 NCT 501 C 1 HETATM 2 C C1 NCT . . . I 2 33.073 93.551 46.576 1 49.34 ? C1 NCT 501 C 1 HETATM 3 C C2 NCT . . . I 2 33.792 93.72 45.376 1 51.67 ? C2 NCT 501 C 1 HETATM 4 C C3 NCT . . . I 2 33.977 94.991 44.868 1 47.72 ? C3 NCT 501 C 1 HETATM 5 C C4 NCT . . . I 2 33.448 96.061 45.556 1 53.24 ? C4 NCT 501 C 1 HETATM 6 C C5 NCT . . . I 2 32.739 95.814 46.75 1 54.49 ? C5 NCT 501 C 1 HETATM 7 N N2 NCT . . . I 2 34.368 92.724 43.065 1 60.57 ? N2 NCT 501 C 1 HETATM 8 C C6 NCT . . . I 2 34.367 92.49 44.638 1 54.92 ? C6 NCT 501 C 1 HETATM 9 C C7 NCT . . . I 2 35.642 92.299 44.973 1 51.16 ? C7 NCT 501 C 1 HETATM 10 C C8 NCT . . . I 2 36.235 91.631 43.801 1 51.98 ? C8 NCT 501 C 1 HETATM 11 C C9 NCT . . . I 2 35.288 91.989 42.595 1 58.88 ? C9 NCT 501 C 1 HETATM 12 C C10 NCT . . . I 2 33.363 92.41 42.618 1 55.15 ? C10 NCT 501 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #