data_6C85
#
_model_server_result.job_id            rREAoUyoYLXxs9vB8F0vng 
_model_server_result.datetime_utc      '2024-11-02 17:28:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6c85 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    6C85 
#
_exptl.entry_id    6C85 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              108.095 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,4-benzoquinone 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6C85 
_cell.length_a            107.351 
_cell.length_b            107.351 
_cell.length_c            223.096 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6C85 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C6 H4 O2' 
_chem_comp.formula_weight    108.095 
_chem_comp.id                PLQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,4-benzoquinone 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'cyclohexa-2,5-diene-1,4-dione;QUINONE RING OF THE PLASTOQUINONE 9' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O5 C5 PLQ doub 260 n n 
C5 C6 PLQ sing 261 n n 
C5 C4 PLQ sing 262 n n 
C6 C1 PLQ doub 263 n n 
C6 H6 PLQ sing 264 n n 
C4 C3 PLQ doub 265 n n 
C4 H4 PLQ sing 266 n n 
C3 C2 PLQ sing 267 n n 
C3 H3 PLQ sing 268 n n 
C2 O2 PLQ doub 269 n n 
C2 C1 PLQ sing 270 n n 
C1 H1 PLQ sing 271 n n 
#
_atom_sites.entry_id                     6C85 
_atom_sites.fract_transf_matrix[1][1]    0.009315 
_atom_sites.fract_transf_matrix[1][2]    0.005378 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010756 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004482 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PLQ A 1 401 2 PLQ PLQ . 
D 2 PLQ B 1 401 1 PLQ PLQ . 
E 3 HOH A 1 501 113 HOH HOH . 
E 3 HOH A 2 502 76 HOH HOH . 
E 3 HOH A 3 503 70 HOH HOH . 
E 3 HOH A 4 504 101 HOH HOH . 
E 3 HOH A 5 505 62 HOH HOH . 
E 3 HOH A 6 506 83 HOH HOH . 
E 3 HOH A 7 507 26 HOH HOH . 
E 3 HOH A 8 508 53 HOH HOH . 
E 3 HOH A 9 509 10 HOH HOH . 
E 3 HOH A 10 510 45 HOH HOH . 
E 3 HOH A 11 511 12 HOH HOH . 
E 3 HOH A 12 512 50 HOH HOH . 
E 3 HOH A 13 513 104 HOH HOH . 
E 3 HOH A 14 514 4 HOH HOH . 
E 3 HOH A 15 515 98 HOH HOH . 
E 3 HOH A 16 516 103 HOH HOH . 
E 3 HOH A 17 517 47 HOH HOH . 
E 3 HOH A 18 518 69 HOH HOH . 
E 3 HOH A 19 519 19 HOH HOH . 
E 3 HOH A 20 520 111 HOH HOH . 
E 3 HOH A 21 521 91 HOH HOH . 
E 3 HOH A 22 522 48 HOH HOH . 
E 3 HOH A 23 523 67 HOH HOH . 
E 3 HOH A 24 524 25 HOH HOH . 
E 3 HOH A 25 525 99 HOH HOH . 
E 3 HOH A 26 526 108 HOH HOH . 
E 3 HOH A 27 527 29 HOH HOH . 
E 3 HOH A 28 528 40 HOH HOH . 
E 3 HOH A 29 529 90 HOH HOH . 
E 3 HOH A 30 530 95 HOH HOH . 
E 3 HOH A 31 531 65 HOH HOH . 
E 3 HOH A 32 532 66 HOH HOH . 
E 3 HOH A 33 533 74 HOH HOH . 
E 3 HOH A 34 534 9 HOH HOH . 
E 3 HOH A 35 535 96 HOH HOH . 
E 3 HOH A 36 536 57 HOH HOH . 
E 3 HOH A 37 537 79 HOH HOH . 
E 3 HOH A 38 538 64 HOH HOH . 
E 3 HOH A 39 539 36 HOH HOH . 
E 3 HOH A 40 540 30 HOH HOH . 
E 3 HOH A 41 541 1 HOH HOH . 
E 3 HOH A 42 542 116 HOH HOH . 
E 3 HOH A 43 543 77 HOH HOH . 
E 3 HOH A 44 544 106 HOH HOH . 
E 3 HOH A 45 545 114 HOH HOH . 
E 3 HOH A 46 546 105 HOH HOH . 
F 3 HOH B 1 501 8 HOH HOH . 
F 3 HOH B 2 502 11 HOH HOH . 
F 3 HOH B 3 503 34 HOH HOH . 
F 3 HOH B 4 504 37 HOH HOH . 
F 3 HOH B 5 505 44 HOH HOH . 
F 3 HOH B 6 506 2 HOH HOH . 
F 3 HOH B 7 507 28 HOH HOH . 
F 3 HOH B 8 508 14 HOH HOH . 
F 3 HOH B 9 509 87 HOH HOH . 
F 3 HOH B 10 510 46 HOH HOH . 
F 3 HOH B 11 511 75 HOH HOH . 
F 3 HOH B 12 512 63 HOH HOH . 
F 3 HOH B 13 513 27 HOH HOH . 
F 3 HOH B 14 514 21 HOH HOH . 
F 3 HOH B 15 515 6 HOH HOH . 
F 3 HOH B 16 516 39 HOH HOH . 
F 3 HOH B 17 517 22 HOH HOH . 
F 3 HOH B 18 518 18 HOH HOH . 
F 3 HOH B 19 519 72 HOH HOH . 
F 3 HOH B 20 520 43 HOH HOH . 
F 3 HOH B 21 521 81 HOH HOH . 
F 3 HOH B 22 522 102 HOH HOH . 
F 3 HOH B 23 523 13 HOH HOH . 
F 3 HOH B 24 524 49 HOH HOH . 
F 3 HOH B 25 525 110 HOH HOH . 
F 3 HOH B 26 526 41 HOH HOH . 
F 3 HOH B 27 527 51 HOH HOH . 
F 3 HOH B 28 528 15 HOH HOH . 
F 3 HOH B 29 529 32 HOH HOH . 
F 3 HOH B 30 530 80 HOH HOH . 
F 3 HOH B 31 531 59 HOH HOH . 
F 3 HOH B 32 532 73 HOH HOH . 
F 3 HOH B 33 533 86 HOH HOH . 
F 3 HOH B 34 534 17 HOH HOH . 
F 3 HOH B 35 535 68 HOH HOH . 
F 3 HOH B 36 536 3 HOH HOH . 
F 3 HOH B 37 537 58 HOH HOH . 
F 3 HOH B 38 538 60 HOH HOH . 
F 3 HOH B 39 539 85 HOH HOH . 
F 3 HOH B 40 540 42 HOH HOH . 
F 3 HOH B 41 541 112 HOH HOH . 
F 3 HOH B 42 542 78 HOH HOH . 
F 3 HOH B 43 543 56 HOH HOH . 
F 3 HOH B 44 544 107 HOH HOH . 
F 3 HOH B 45 545 89 HOH HOH . 
F 3 HOH B 46 546 97 HOH HOH . 
F 3 HOH B 47 547 52 HOH HOH . 
F 3 HOH B 48 548 38 HOH HOH . 
F 3 HOH B 49 549 88 HOH HOH . 
F 3 HOH B 50 550 115 HOH HOH . 
F 3 HOH B 51 551 84 HOH HOH . 
F 3 HOH B 52 552 54 HOH HOH . 
F 3 HOH B 53 553 55 HOH HOH . 
F 3 HOH B 54 554 93 HOH HOH . 
F 3 HOH B 55 555 71 HOH HOH . 
F 3 HOH B 56 556 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O5 PLQ . . . D 2 9.65 48.88 456.119 1 86.61 ? O5 PLQ 401 B 1 
HETATM 2 C C5 PLQ . . . D 2 8.997 49.533 456.891 1 98.44 ? C5 PLQ 401 B 1 
HETATM 3 C C6 PLQ . . . D 2 9.32 51.012 457.115 1 86.58 ? C6 PLQ 401 B 1 
HETATM 4 C C4 PLQ . . . D 2 7.833 48.913 457.667 1 70.03 ? C4 PLQ 401 B 1 
HETATM 5 C C3 PLQ . . . D 2 7.013 49.775 458.607 1 69.28 ? C3 PLQ 401 B 1 
HETATM 6 C C2 PLQ . . . D 2 7.329 51.251 458.826 1 84.92 ? C2 PLQ 401 B 1 
HETATM 7 O O2 PLQ . . . D 2 6.671 51.895 459.587 1 63.95 ? O2 PLQ 401 B 1 
HETATM 8 C C1 PLQ . . . D 2 8.5 51.873 458.067 1 72.7 ? C1 PLQ 401 B 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#