data_6C8Y # _model_server_result.job_id ejBCWhi1PqpOO3PQnNzQGQ _model_server_result.datetime_utc '2024-11-22 09:23:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c8y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":203}' # _entry.id 6C8Y # _exptl.entry_id 6C8Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6C8Y _cell.length_a 59.118 _cell.length_b 86.41 _cell.length_c 45.793 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C8Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 208 n n C1 C2 GOL sing 209 n n C1 H11 GOL sing 210 n n C1 H12 GOL sing 211 n n O1 HO1 GOL sing 212 n n C2 O2 GOL sing 213 n n C2 C3 GOL sing 214 n n C2 H2 GOL sing 215 n n O2 HO2 GOL sing 216 n n C3 O3 GOL sing 217 n n C3 H31 GOL sing 218 n n C3 H32 GOL sing 219 n n O3 HO3 GOL sing 220 n n # _atom_sites.entry_id 6C8Y _atom_sites.fract_transf_matrix[1][1] 0.016915 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011573 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021837 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 101 1 CL CL . D 3 BVR A 1 102 1 BVR BVR . E 2 CL B 1 201 2 CL CL . F 2 CL B 1 202 3 CL CL . G 4 GOL B 1 203 1 GOL GOL . H 5 HOH A 1 201 86 HOH HOH . H 5 HOH A 2 202 110 HOH HOH . H 5 HOH A 3 203 126 HOH HOH . H 5 HOH A 4 204 17 HOH HOH . H 5 HOH A 5 205 104 HOH HOH . H 5 HOH A 6 206 26 HOH HOH . H 5 HOH A 7 207 54 HOH HOH . H 5 HOH A 8 208 113 HOH HOH . H 5 HOH A 9 209 23 HOH HOH . H 5 HOH A 10 210 91 HOH HOH . H 5 HOH A 11 211 72 HOH HOH . H 5 HOH A 12 212 42 HOH HOH . H 5 HOH A 13 213 77 HOH HOH . H 5 HOH A 14 214 112 HOH HOH . H 5 HOH A 15 215 68 HOH HOH . H 5 HOH A 16 216 82 HOH HOH . H 5 HOH A 17 217 9 HOH HOH . H 5 HOH A 18 218 20 HOH HOH . H 5 HOH A 19 219 121 HOH HOH . H 5 HOH A 20 220 85 HOH HOH . H 5 HOH A 21 221 125 HOH HOH . H 5 HOH A 22 222 109 HOH HOH . H 5 HOH A 23 223 39 HOH HOH . H 5 HOH A 24 224 45 HOH HOH . H 5 HOH A 25 225 79 HOH HOH . H 5 HOH A 26 226 24 HOH HOH . H 5 HOH A 27 227 44 HOH HOH . H 5 HOH A 28 228 33 HOH HOH . H 5 HOH A 29 229 51 HOH HOH . H 5 HOH A 30 230 36 HOH HOH . H 5 HOH A 31 231 97 HOH HOH . H 5 HOH A 32 232 94 HOH HOH . H 5 HOH A 33 233 106 HOH HOH . H 5 HOH A 34 234 117 HOH HOH . H 5 HOH A 35 235 5 HOH HOH . H 5 HOH A 36 236 46 HOH HOH . H 5 HOH A 37 237 135 HOH HOH . H 5 HOH A 38 238 102 HOH HOH . H 5 HOH A 39 239 96 HOH HOH . H 5 HOH A 40 240 64 HOH HOH . H 5 HOH A 41 241 78 HOH HOH . H 5 HOH A 42 242 14 HOH HOH . H 5 HOH A 43 243 41 HOH HOH . H 5 HOH A 44 244 40 HOH HOH . H 5 HOH A 45 245 87 HOH HOH . H 5 HOH A 46 246 3 HOH HOH . H 5 HOH A 47 247 19 HOH HOH . H 5 HOH A 48 248 101 HOH HOH . H 5 HOH A 49 249 34 HOH HOH . H 5 HOH A 50 250 153 HOH HOH . H 5 HOH A 51 251 29 HOH HOH . H 5 HOH A 52 252 55 HOH HOH . H 5 HOH A 53 253 108 HOH HOH . H 5 HOH A 54 254 162 HOH HOH . H 5 HOH A 55 255 18 HOH HOH . H 5 HOH A 56 256 4 HOH HOH . H 5 HOH A 57 257 11 HOH HOH . H 5 HOH A 58 258 164 HOH HOH . H 5 HOH A 59 259 119 HOH HOH . H 5 HOH A 60 260 156 HOH HOH . H 5 HOH A 61 261 95 HOH HOH . H 5 HOH A 62 262 144 HOH HOH . H 5 HOH A 63 263 157 HOH HOH . H 5 HOH A 64 264 63 HOH HOH . H 5 HOH A 65 265 155 HOH HOH . H 5 HOH A 66 266 133 HOH HOH . H 5 HOH A 67 267 134 HOH HOH . H 5 HOH A 68 268 66 HOH HOH . H 5 HOH A 69 269 149 HOH HOH . H 5 HOH A 70 270 31 HOH HOH . H 5 HOH A 71 271 136 HOH HOH . H 5 HOH A 72 272 128 HOH HOH . H 5 HOH A 73 273 90 HOH HOH . H 5 HOH A 74 274 10 HOH HOH . H 5 HOH A 75 275 132 HOH HOH . H 5 HOH A 76 276 105 HOH HOH . H 5 HOH A 77 277 74 HOH HOH . H 5 HOH A 78 278 159 HOH HOH . H 5 HOH A 79 279 139 HOH HOH . H 5 HOH A 80 280 129 HOH HOH . H 5 HOH A 81 281 147 HOH HOH . I 5 HOH B 1 301 140 HOH HOH . I 5 HOH B 2 302 73 HOH HOH . I 5 HOH B 3 303 118 HOH HOH . I 5 HOH B 4 304 67 HOH HOH . I 5 HOH B 5 305 28 HOH HOH . I 5 HOH B 6 306 122 HOH HOH . I 5 HOH B 7 307 70 HOH HOH . I 5 HOH B 8 308 150 HOH HOH . I 5 HOH B 9 309 98 HOH HOH . I 5 HOH B 10 310 93 HOH HOH . I 5 HOH B 11 311 37 HOH HOH . I 5 HOH B 12 312 60 HOH HOH . I 5 HOH B 13 313 158 HOH HOH . I 5 HOH B 14 314 146 HOH HOH . I 5 HOH B 15 315 30 HOH HOH . I 5 HOH B 16 316 76 HOH HOH . I 5 HOH B 17 317 92 HOH HOH . I 5 HOH B 18 318 2 HOH HOH . I 5 HOH B 19 319 163 HOH HOH . I 5 HOH B 20 320 65 HOH HOH . I 5 HOH B 21 321 116 HOH HOH . I 5 HOH B 22 322 123 HOH HOH . I 5 HOH B 23 323 57 HOH HOH . I 5 HOH B 24 324 52 HOH HOH . I 5 HOH B 25 325 61 HOH HOH . I 5 HOH B 26 326 124 HOH HOH . I 5 HOH B 27 327 56 HOH HOH . I 5 HOH B 28 328 27 HOH HOH . I 5 HOH B 29 329 50 HOH HOH . I 5 HOH B 30 330 58 HOH HOH . I 5 HOH B 31 331 127 HOH HOH . I 5 HOH B 32 332 62 HOH HOH . I 5 HOH B 33 333 71 HOH HOH . I 5 HOH B 34 334 100 HOH HOH . I 5 HOH B 35 335 120 HOH HOH . I 5 HOH B 36 336 47 HOH HOH . I 5 HOH B 37 337 12 HOH HOH . I 5 HOH B 38 338 21 HOH HOH . I 5 HOH B 39 339 7 HOH HOH . I 5 HOH B 40 340 160 HOH HOH . I 5 HOH B 41 341 99 HOH HOH . I 5 HOH B 42 342 38 HOH HOH . I 5 HOH B 43 343 25 HOH HOH . I 5 HOH B 44 344 6 HOH HOH . I 5 HOH B 45 345 75 HOH HOH . I 5 HOH B 46 346 16 HOH HOH . I 5 HOH B 47 347 89 HOH HOH . I 5 HOH B 48 348 107 HOH HOH . I 5 HOH B 49 349 59 HOH HOH . I 5 HOH B 50 350 69 HOH HOH . I 5 HOH B 51 351 103 HOH HOH . I 5 HOH B 52 352 114 HOH HOH . I 5 HOH B 53 353 53 HOH HOH . I 5 HOH B 54 354 138 HOH HOH . I 5 HOH B 55 355 32 HOH HOH . I 5 HOH B 56 356 13 HOH HOH . I 5 HOH B 57 357 15 HOH HOH . I 5 HOH B 58 358 1 HOH HOH . I 5 HOH B 59 359 8 HOH HOH . I 5 HOH B 60 360 22 HOH HOH . I 5 HOH B 61 361 88 HOH HOH . I 5 HOH B 62 362 161 HOH HOH . I 5 HOH B 63 363 49 HOH HOH . I 5 HOH B 64 364 43 HOH HOH . I 5 HOH B 65 365 131 HOH HOH . I 5 HOH B 66 366 48 HOH HOH . I 5 HOH B 67 367 80 HOH HOH . I 5 HOH B 68 368 111 HOH HOH . I 5 HOH B 69 369 152 HOH HOH . I 5 HOH B 70 370 35 HOH HOH . I 5 HOH B 71 371 83 HOH HOH . I 5 HOH B 72 372 141 HOH HOH . I 5 HOH B 73 373 154 HOH HOH . I 5 HOH B 74 374 142 HOH HOH . I 5 HOH B 75 375 137 HOH HOH . I 5 HOH B 76 376 166 HOH HOH . I 5 HOH B 77 377 151 HOH HOH . I 5 HOH B 78 378 81 HOH HOH . I 5 HOH B 79 379 143 HOH HOH . I 5 HOH B 80 380 145 HOH HOH . I 5 HOH B 81 381 115 HOH HOH . I 5 HOH B 82 382 84 HOH HOH . I 5 HOH B 83 383 130 HOH HOH . I 5 HOH B 84 384 148 HOH HOH . I 5 HOH B 85 385 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 -14.945 13.65 -38.948 1 38.41 ? C1 GOL 203 B 1 HETATM 2 O O1 GOL . . . G 4 -14.304 12.378 -38.834 1 34.29 ? O1 GOL 203 B 1 HETATM 3 C C2 GOL . . . G 4 -14.276 14.447 -40.116 1 35.77 ? C2 GOL 203 B 1 HETATM 4 O O2 GOL . . . G 4 -13.968 13.612 -41.16 1 33.03 ? O2 GOL 203 B 1 HETATM 5 C C3 GOL . . . G 4 -15.301 15.564 -40.547 1 42.79 ? C3 GOL 203 B 1 HETATM 6 O O3 GOL . . . G 4 -15.696 16.3 -39.397 1 34.22 ? O3 GOL 203 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #