data_6C9S # _model_server_result.job_id SFcOEiZo8pN8F8KeS4l9Ew _model_server_result.datetime_utc '2024-11-28 16:21:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6c9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":403}' # _entry.id 6C9S # _exptl.entry_id 6C9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6C9S _cell.length_a 49.91 _cell.length_b 49.91 _cell.length_c 264.377 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 251 A ASP 251 1_555 E NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? metalc ? metalc2 A O THR 253 A THR 253 1_555 E NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? metalc ? metalc3 A O VAL 287 A VAL 287 1_555 E NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? metalc ? metalc4 A O SER 290 A SER 290 1_555 E NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc5 B O ASP 251 B ASP 251 1_555 H NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc6 B O THR 253 B THR 253 1_555 H NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? metalc ? metalc7 B O VAL 287 B VAL 287 1_555 H NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.843 ? metalc ? metalc8 B O SER 290 B SER 290 1_555 H NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? metalc ? metalc9 B O GLY 292 B GLY 292 1_555 H NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.186 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6C9S _atom_sites.fract_transf_matrix[1][1] 0.020036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020036 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ERP A 1 401 401 ERP ERP . D 3 SO4 A 1 402 402 SO4 SO4 . E 4 NA A 1 403 403 NA NA . F 2 ERP B 1 401 401 ERP ERP . G 3 SO4 B 1 402 402 SO4 SO4 . H 4 NA B 1 403 403 NA NA . I 5 HOH A 1 501 501 HOH HOH . I 5 HOH A 2 502 502 HOH HOH . I 5 HOH A 3 503 503 HOH HOH . I 5 HOH A 4 504 504 HOH HOH . I 5 HOH A 5 505 505 HOH HOH . I 5 HOH A 6 506 506 HOH HOH . I 5 HOH A 7 507 507 HOH HOH . I 5 HOH A 8 508 508 HOH HOH . I 5 HOH A 9 509 509 HOH HOH . I 5 HOH A 10 510 510 HOH HOH . I 5 HOH A 11 511 511 HOH HOH . I 5 HOH A 12 512 512 HOH HOH . I 5 HOH A 13 513 513 HOH HOH . I 5 HOH A 14 514 514 HOH HOH . I 5 HOH A 15 515 515 HOH HOH . I 5 HOH A 16 516 516 HOH HOH . I 5 HOH A 17 517 517 HOH HOH . I 5 HOH A 18 518 518 HOH HOH . I 5 HOH A 19 519 519 HOH HOH . I 5 HOH A 20 520 520 HOH HOH . I 5 HOH A 21 521 521 HOH HOH . I 5 HOH A 22 522 522 HOH HOH . I 5 HOH A 23 523 523 HOH HOH . I 5 HOH A 24 524 524 HOH HOH . I 5 HOH A 25 525 525 HOH HOH . I 5 HOH A 26 526 526 HOH HOH . I 5 HOH A 27 527 527 HOH HOH . I 5 HOH A 28 528 528 HOH HOH . I 5 HOH A 29 529 529 HOH HOH . I 5 HOH A 30 530 530 HOH HOH . I 5 HOH A 31 531 531 HOH HOH . I 5 HOH A 32 532 532 HOH HOH . I 5 HOH A 33 533 533 HOH HOH . I 5 HOH A 34 534 534 HOH HOH . I 5 HOH A 35 535 535 HOH HOH . I 5 HOH A 36 536 536 HOH HOH . I 5 HOH A 37 537 537 HOH HOH . I 5 HOH A 38 538 538 HOH HOH . I 5 HOH A 39 539 539 HOH HOH . I 5 HOH A 40 540 540 HOH HOH . I 5 HOH A 41 541 541 HOH HOH . I 5 HOH A 42 542 542 HOH HOH . I 5 HOH A 43 543 543 HOH HOH . I 5 HOH A 44 544 544 HOH HOH . I 5 HOH A 45 545 545 HOH HOH . I 5 HOH A 46 546 546 HOH HOH . I 5 HOH A 47 547 547 HOH HOH . I 5 HOH A 48 548 548 HOH HOH . I 5 HOH A 49 549 549 HOH HOH . I 5 HOH A 50 550 550 HOH HOH . I 5 HOH A 51 551 551 HOH HOH . I 5 HOH A 52 552 552 HOH HOH . I 5 HOH A 53 553 553 HOH HOH . I 5 HOH A 54 554 554 HOH HOH . I 5 HOH A 55 555 555 HOH HOH . I 5 HOH A 56 556 556 HOH HOH . I 5 HOH A 57 557 557 HOH HOH . I 5 HOH A 58 558 558 HOH HOH . I 5 HOH A 59 559 559 HOH HOH . I 5 HOH A 60 560 560 HOH HOH . I 5 HOH A 61 561 561 HOH HOH . I 5 HOH A 62 562 562 HOH HOH . I 5 HOH A 63 563 563 HOH HOH . I 5 HOH A 64 564 564 HOH HOH . I 5 HOH A 65 565 565 HOH HOH . I 5 HOH A 66 566 566 HOH HOH . I 5 HOH A 67 567 567 HOH HOH . I 5 HOH A 68 568 568 HOH HOH . I 5 HOH A 69 569 569 HOH HOH . I 5 HOH A 70 570 570 HOH HOH . I 5 HOH A 71 571 571 HOH HOH . I 5 HOH A 72 572 572 HOH HOH . I 5 HOH A 73 573 573 HOH HOH . I 5 HOH A 74 574 574 HOH HOH . I 5 HOH A 75 575 575 HOH HOH . I 5 HOH A 76 576 576 HOH HOH . I 5 HOH A 77 577 577 HOH HOH . I 5 HOH A 78 578 578 HOH HOH . I 5 HOH A 79 579 579 HOH HOH . I 5 HOH A 80 580 580 HOH HOH . I 5 HOH A 81 581 581 HOH HOH . I 5 HOH A 82 582 582 HOH HOH . I 5 HOH A 83 583 583 HOH HOH . I 5 HOH A 84 584 584 HOH HOH . I 5 HOH A 85 585 585 HOH HOH . I 5 HOH A 86 586 586 HOH HOH . I 5 HOH A 87 587 587 HOH HOH . I 5 HOH A 88 588 588 HOH HOH . I 5 HOH A 89 589 589 HOH HOH . I 5 HOH A 90 590 590 HOH HOH . I 5 HOH A 91 591 591 HOH HOH . I 5 HOH A 92 592 592 HOH HOH . I 5 HOH A 93 593 593 HOH HOH . I 5 HOH A 94 594 594 HOH HOH . I 5 HOH A 95 595 595 HOH HOH . I 5 HOH A 96 596 596 HOH HOH . I 5 HOH A 97 597 597 HOH HOH . I 5 HOH A 98 598 598 HOH HOH . I 5 HOH A 99 599 599 HOH HOH . I 5 HOH A 100 600 600 HOH HOH . I 5 HOH A 101 601 601 HOH HOH . I 5 HOH A 102 602 602 HOH HOH . I 5 HOH A 103 603 603 HOH HOH . I 5 HOH A 104 604 604 HOH HOH . I 5 HOH A 105 605 605 HOH HOH . I 5 HOH A 106 606 606 HOH HOH . I 5 HOH A 107 607 607 HOH HOH . I 5 HOH A 108 608 608 HOH HOH . I 5 HOH A 109 609 609 HOH HOH . I 5 HOH A 110 610 610 HOH HOH . I 5 HOH A 111 611 611 HOH HOH . I 5 HOH A 112 612 612 HOH HOH . J 5 HOH B 1 501 501 HOH HOH . J 5 HOH B 2 502 502 HOH HOH . J 5 HOH B 3 503 503 HOH HOH . J 5 HOH B 4 504 504 HOH HOH . J 5 HOH B 5 505 505 HOH HOH . J 5 HOH B 6 506 506 HOH HOH . J 5 HOH B 7 507 507 HOH HOH . J 5 HOH B 8 508 508 HOH HOH . J 5 HOH B 9 509 509 HOH HOH . J 5 HOH B 10 510 510 HOH HOH . J 5 HOH B 11 511 511 HOH HOH . J 5 HOH B 12 512 512 HOH HOH . J 5 HOH B 13 513 513 HOH HOH . J 5 HOH B 14 514 514 HOH HOH . J 5 HOH B 15 515 515 HOH HOH . J 5 HOH B 16 516 516 HOH HOH . J 5 HOH B 17 517 517 HOH HOH . J 5 HOH B 18 518 518 HOH HOH . J 5 HOH B 19 519 519 HOH HOH . J 5 HOH B 20 520 520 HOH HOH . J 5 HOH B 21 521 521 HOH HOH . J 5 HOH B 22 522 522 HOH HOH . J 5 HOH B 23 523 523 HOH HOH . J 5 HOH B 24 524 524 HOH HOH . J 5 HOH B 25 525 525 HOH HOH . J 5 HOH B 26 526 526 HOH HOH . J 5 HOH B 27 527 527 HOH HOH . J 5 HOH B 28 528 528 HOH HOH . J 5 HOH B 29 529 529 HOH HOH . J 5 HOH B 30 530 530 HOH HOH . J 5 HOH B 31 531 531 HOH HOH . J 5 HOH B 32 532 532 HOH HOH . J 5 HOH B 33 533 533 HOH HOH . J 5 HOH B 34 534 534 HOH HOH . J 5 HOH B 35 535 535 HOH HOH . J 5 HOH B 36 536 536 HOH HOH . J 5 HOH B 37 537 537 HOH HOH . J 5 HOH B 38 538 538 HOH HOH . J 5 HOH B 39 539 539 HOH HOH . J 5 HOH B 40 540 540 HOH HOH . J 5 HOH B 41 541 541 HOH HOH . J 5 HOH B 42 542 542 HOH HOH . J 5 HOH B 43 543 543 HOH HOH . J 5 HOH B 44 544 544 HOH HOH . J 5 HOH B 45 545 545 HOH HOH . J 5 HOH B 46 546 546 HOH HOH . J 5 HOH B 47 547 547 HOH HOH . J 5 HOH B 48 548 548 HOH HOH . J 5 HOH B 49 549 549 HOH HOH . J 5 HOH B 50 550 550 HOH HOH . J 5 HOH B 51 551 551 HOH HOH . J 5 HOH B 52 552 552 HOH HOH . J 5 HOH B 53 553 553 HOH HOH . J 5 HOH B 54 554 554 HOH HOH . J 5 HOH B 55 555 555 HOH HOH . J 5 HOH B 56 556 556 HOH HOH . J 5 HOH B 57 557 557 HOH HOH . J 5 HOH B 58 558 558 HOH HOH . J 5 HOH B 59 559 559 HOH HOH . J 5 HOH B 60 560 560 HOH HOH . J 5 HOH B 61 561 561 HOH HOH . J 5 HOH B 62 562 562 HOH HOH . J 5 HOH B 63 563 563 HOH HOH . J 5 HOH B 64 564 564 HOH HOH . J 5 HOH B 65 565 565 HOH HOH . J 5 HOH B 66 566 566 HOH HOH . J 5 HOH B 67 567 567 HOH HOH . J 5 HOH B 68 568 568 HOH HOH . J 5 HOH B 69 569 569 HOH HOH . J 5 HOH B 70 570 570 HOH HOH . J 5 HOH B 71 571 571 HOH HOH . J 5 HOH B 72 572 572 HOH HOH . J 5 HOH B 73 573 573 HOH HOH . J 5 HOH B 74 574 574 HOH HOH . J 5 HOH B 75 575 575 HOH HOH . J 5 HOH B 76 576 576 HOH HOH . J 5 HOH B 77 577 577 HOH HOH . J 5 HOH B 78 578 578 HOH HOH . J 5 HOH B 79 579 579 HOH HOH . J 5 HOH B 80 580 580 HOH HOH . J 5 HOH B 81 581 581 HOH HOH . J 5 HOH B 82 582 582 HOH HOH . J 5 HOH B 83 583 583 HOH HOH . J 5 HOH B 84 584 584 HOH HOH . J 5 HOH B 85 585 585 HOH HOH . J 5 HOH B 86 586 586 HOH HOH . J 5 HOH B 87 587 587 HOH HOH . J 5 HOH B 88 588 588 HOH HOH . J 5 HOH B 89 589 589 HOH HOH . J 5 HOH B 90 590 590 HOH HOH . J 5 HOH B 91 591 591 HOH HOH . J 5 HOH B 92 592 592 HOH HOH . J 5 HOH B 93 593 593 HOH HOH . J 5 HOH B 94 594 594 HOH HOH . J 5 HOH B 95 595 595 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 11.031 _atom_site.Cartn_y 14.975 _atom_site.Cartn_z 34.328 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 403 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #