data_6CA9 # _model_server_result.job_id S04hRflgf7D5vSu9OZRQCA _model_server_result.datetime_utc '2024-10-19 07:23:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ca9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 6CA9 # _exptl.entry_id 6CA9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CA9 _cell.length_a 84.199 _cell.length_b 87.158 _cell.length_c 142.565 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CA9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H 1 1 C,D,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 89 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 134 A CYS 134 1_555 A SG CYS 194 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 98 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 161 B CYS 140 1_555 B SG CYS 217 B CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 C SG CYS 23 C CYS 23 1_555 C SG CYS 89 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 C SG CYS 134 C CYS 134 1_555 C SG CYS 194 C CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 D SG CYS 22 D CYS 22 1_555 D SG CYS 98 D CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 D SG CYS 161 D CYS 140 1_555 D SG CYS 217 D CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 B C GLY 110 B GLY 100 1_555 B N TYS 111 B TYS 100 1_555 D ? ? E ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C TYS 111 B TYS 100 1_555 B N ASP 112 B ASP 100 1_555 E ? ? F ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C HIS 114 B HIS 100 1_555 B N TYS 115 B TYS 100 1_555 H ? ? I ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C TYS 115 B TYS 100 1_555 B N TYR 116 B TYR 100 1_555 I ? ? J ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 D C GLY 110 D GLY 100 1_555 D N TYS 111 D TYS 100 1_555 D ? ? E ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 D C TYS 111 D TYS 100 1_555 D N ASP 112 D ASP 100 1_555 E ? ? F ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 D C HIS 114 D HIS 100 1_555 D N TYS 115 D TYS 100 1_555 H ? ? I ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 D C TYS 115 D TYS 100 1_555 D N TYR 116 D TYR 100 1_555 I ? ? J ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 250 n n C1 C2 PEG sing 251 n n C1 H11 PEG sing 252 n n C1 H12 PEG sing 253 n n O1 HO1 PEG sing 254 n n C2 O2 PEG sing 255 n n C2 H21 PEG sing 256 n n C2 H22 PEG sing 257 n n O2 C3 PEG sing 258 n n C3 C4 PEG sing 259 n n C3 H31 PEG sing 260 n n C3 H32 PEG sing 261 n n C4 O4 PEG sing 262 n n C4 H41 PEG sing 263 n n C4 H42 PEG sing 264 n n O4 HO4 PEG sing 265 n n # _atom_sites.entry_id 6CA9 _atom_sites.fract_transf_matrix[1][1] 0.011877 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011473 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 301 1 GOL GOL . F 4 PEG A 1 302 1 PEG PG0 . G 5 HOH A 1 401 20 HOH HOH . G 5 HOH A 2 402 27 HOH HOH . G 5 HOH A 3 403 2 HOH HOH . G 5 HOH A 4 404 22 HOH HOH . G 5 HOH A 5 405 6 HOH HOH . G 5 HOH A 6 406 17 HOH HOH . G 5 HOH A 7 407 30 HOH HOH . G 5 HOH A 8 408 24 HOH HOH . G 5 HOH A 9 409 10 HOH HOH . G 5 HOH A 10 410 9 HOH HOH . G 5 HOH A 11 411 32 HOH HOH . G 5 HOH A 12 412 21 HOH HOH . G 5 HOH A 13 413 7 HOH HOH . G 5 HOH A 14 414 5 HOH HOH . G 5 HOH A 15 415 31 HOH HOH . H 5 HOH B 1 301 13 HOH HOH . H 5 HOH B 2 302 26 HOH HOH . H 5 HOH B 3 303 28 HOH HOH . H 5 HOH B 4 304 12 HOH HOH . H 5 HOH B 5 305 15 HOH HOH . H 5 HOH B 6 306 11 HOH HOH . H 5 HOH B 7 307 3 HOH HOH . H 5 HOH B 8 308 19 HOH HOH . I 5 HOH C 1 301 16 HOH HOH . I 5 HOH C 2 302 18 HOH HOH . I 5 HOH C 3 303 8 HOH HOH . I 5 HOH C 4 304 29 HOH HOH . I 5 HOH C 5 305 14 HOH HOH . J 5 HOH D 1 301 1 HOH HOH . J 5 HOH D 2 302 23 HOH HOH . J 5 HOH D 3 303 25 HOH HOH . J 5 HOH D 4 304 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 PEG . . . F 4 -0.519 -19.534 -23.152 1 79.38 ? O2 PEG 302 A 1 HETATM 2 C C3 PEG . . . F 4 -1.602 -20.175 -23.762 1 80.71 ? C3 PEG 302 A 1 HETATM 3 C C4 PEG . . . F 4 -1.872 -19.538 -25.124 1 82.89 ? C4 PEG 302 A 1 HETATM 4 O O4 PEG . . . F 4 -2.9 -20.236 -25.772 1 82.5 ? O4 PEG 302 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 4 #