data_6CB2
#
_model_server_result.job_id            pB_VJey6HkR4Un4yxLvrxQ 
_model_server_result.datetime_utc      '2024-11-28 00:12:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6cb2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":309}' 
#
_entry.id    6CB2 
#
_exptl.entry_id    6CB2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6CB2 
_cell.length_a            109.88 
_cell.length_b            146.08 
_cell.length_c            40.19 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CB2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        21 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 40.19 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 237 n n 
C10 C9 OLC doub 238 n n 
C10 C11 OLC sing 239 n n 
C9 C8 OLC sing 240 n n 
C17 C16 OLC sing 241 z n 
C11 C12 OLC sing 242 n n 
C8 C7 OLC sing 243 n n 
C24 C22 OLC sing 244 n n 
C24 O25 OLC sing 245 n n 
C16 C15 OLC sing 246 n n 
C12 C13 OLC sing 247 n n 
C7 C6 OLC sing 248 n n 
C15 C14 OLC sing 249 n n 
C13 C14 OLC sing 250 n n 
C6 C5 OLC sing 251 n n 
C5 C4 OLC sing 252 n n 
C4 C3 OLC sing 253 n n 
C3 C2 OLC sing 254 n n 
C2 C1 OLC sing 255 n n 
C21 C22 OLC sing 256 n n 
C21 O20 OLC sing 257 n n 
C1 O19 OLC doub 258 n n 
C1 O20 OLC sing 259 n n 
C22 O23 OLC sing 260 n n 
C18 H18 OLC sing 261 n n 
C18 H18A OLC sing 262 n n 
C18 H18B OLC sing 263 n n 
C10 H10 OLC sing 264 n n 
C9 H9 OLC sing 265 n n 
C17 H17 OLC sing 266 n n 
C17 H17A OLC sing 267 n n 
C11 H11 OLC sing 268 n n 
C11 H11A OLC sing 269 n n 
C8 H8 OLC sing 270 n n 
C8 H8A OLC sing 271 n n 
C24 H24 OLC sing 272 n n 
C24 H24A OLC sing 273 n n 
C16 H16 OLC sing 274 n n 
C16 H16A OLC sing 275 n n 
C12 H12 OLC sing 276 n n 
C12 H12A OLC sing 277 n n 
C7 H7 OLC sing 278 n n 
C7 H7A OLC sing 279 n n 
C15 H15 OLC sing 280 n n 
C15 H15A OLC sing 281 n n 
C13 H13 OLC sing 282 n n 
C13 H13A OLC sing 283 n n 
C6 H6 OLC sing 284 n n 
C6 H6A OLC sing 285 n n 
C14 H14 OLC sing 286 n n 
C14 H14A OLC sing 287 n n 
C5 H5 OLC sing 288 n n 
C5 H5A OLC sing 289 n n 
C4 H4 OLC sing 290 n n 
C4 H4A OLC sing 291 n n 
C3 H3 OLC sing 292 n n 
C3 H3A OLC sing 293 n n 
C2 H2 OLC sing 294 n n 
C2 H2A OLC sing 295 n n 
C21 H21 OLC sing 296 n n 
C21 H21A OLC sing 297 n n 
C22 H22 OLC sing 298 n n 
O25 HO25 OLC sing 299 n n 
O23 HO23 OLC sing 300 n n 
#
_atom_sites.entry_id                     6CB2 
_atom_sites.fract_transf_matrix[1][1]    0.009101 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006846 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024882 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 301 1 SO4 SO4 . 
C 2 SO4 A 1 302 2 SO4 SO4 . 
D 2 SO4 A 1 303 3 SO4 SO4 . 
E 2 SO4 A 1 304 4 SO4 SO4 . 
F 3 OLC A 1 305 1 OLC OLC . 
G 3 OLC A 1 306 2 OLC OLC . 
H 3 OLC A 1 307 3 OLC OLC . 
I 3 OLC A 1 308 4 OLC OLC . 
J 3 OLC A 1 309 5 OLC OLC . 
K 4 HOH A 1 401 5 HOH HOH . 
K 4 HOH A 2 402 7 HOH HOH . 
K 4 HOH A 3 403 22 HOH HOH . 
K 4 HOH A 4 404 4 HOH HOH . 
K 4 HOH A 5 405 3 HOH HOH . 
K 4 HOH A 6 406 11 HOH HOH . 
K 4 HOH A 7 407 13 HOH HOH . 
K 4 HOH A 8 408 6 HOH HOH . 
K 4 HOH A 9 409 26 HOH HOH . 
K 4 HOH A 10 410 14 HOH HOH . 
K 4 HOH A 11 411 1 HOH HOH . 
K 4 HOH A 12 412 25 HOH HOH . 
K 4 HOH A 13 413 37 HOH HOH . 
K 4 HOH A 14 414 27 HOH HOH . 
K 4 HOH A 15 415 24 HOH HOH . 
K 4 HOH A 16 416 17 HOH HOH . 
K 4 HOH A 17 417 33 HOH HOH . 
K 4 HOH A 18 418 39 HOH HOH . 
K 4 HOH A 19 419 32 HOH HOH . 
K 4 HOH A 20 420 38 HOH HOH . 
K 4 HOH A 21 421 12 HOH HOH . 
K 4 HOH A 22 422 9 HOH HOH . 
K 4 HOH A 23 423 19 HOH HOH . 
K 4 HOH A 24 424 18 HOH HOH . 
K 4 HOH A 25 425 10 HOH HOH . 
K 4 HOH A 26 426 15 HOH HOH . 
K 4 HOH A 27 427 21 HOH HOH . 
K 4 HOH A 28 428 20 HOH HOH . 
K 4 HOH A 29 429 34 HOH HOH . 
K 4 HOH A 30 430 35 HOH HOH . 
K 4 HOH A 31 431 28 HOH HOH . 
K 4 HOH A 32 432 30 HOH HOH . 
K 4 HOH A 33 433 44 HOH HOH . 
K 4 HOH A 34 434 2 HOH HOH . 
K 4 HOH A 35 435 40 HOH HOH . 
K 4 HOH A 36 436 43 HOH HOH . 
K 4 HOH A 37 437 29 HOH HOH . 
K 4 HOH A 38 438 23 HOH HOH . 
K 4 HOH A 39 439 8 HOH HOH . 
K 4 HOH A 40 440 42 HOH HOH . 
K 4 HOH A 41 441 16 HOH HOH . 
K 4 HOH A 42 442 36 HOH HOH . 
K 4 HOH A 43 443 31 HOH HOH . 
K 4 HOH A 44 444 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . J 3 27.422 11.91 5.293 1 49.9 ? C18 OLC 309 A 1 
HETATM 2 C C10 OLC . . . J 3 22.722 10.172 13.256 1 70.33 ? C10 OLC 309 A 1 
HETATM 3 C C9 OLC . . . J 3 23.488 10.823 14.109 1 73.78 ? C9 OLC 309 A 1 
HETATM 4 C C17 OLC . . . J 3 26.261 11.061 5.81 1 49.09 ? C17 OLC 309 A 1 
HETATM 5 C C11 OLC . . . J 3 23.321 9.095 12.35 1 70.97 ? C11 OLC 309 A 1 
HETATM 6 C C8 OLC . . . J 3 22.895 11.899 15.022 1 71.01 ? C8 OLC 309 A 1 
HETATM 7 C C24 OLC . . . J 3 28.408 16.125 20.211 1 35.29 ? C24 OLC 309 A 1 
HETATM 8 C C16 OLC . . . J 3 25.982 11.425 7.266 1 50.64 ? C16 OLC 309 A 1 
HETATM 9 C C12 OLC . . . J 3 24.43 9.689 11.482 1 72.75 ? C12 OLC 309 A 1 
HETATM 10 C C7 OLC . . . J 3 21.872 11.259 15.962 1 68.43 ? C7 OLC 309 A 1 
HETATM 11 C C15 OLC . . . J 3 24.834 10.583 7.819 1 57.55 ? C15 OLC 309 A 1 
HETATM 12 C C13 OLC . . . J 3 23.973 9.737 10.023 1 73.44 ? C13 OLC 309 A 1 
HETATM 13 C C6 OLC . . . J 3 22.528 10.902 17.295 1 66.06 ? C6 OLC 309 A 1 
HETATM 14 C C14 OLC . . . J 3 24.677 10.891 9.308 1 68 ? C14 OLC 309 A 1 
HETATM 15 C C5 OLC . . . J 3 21.997 11.839 18.374 1 67.92 ? C5 OLC 309 A 1 
HETATM 16 C C4 OLC . . . J 3 23.163 12.514 19.094 1 71.9 ? C4 OLC 309 A 1 
HETATM 17 C C3 OLC . . . J 3 22.617 13.596 20.027 1 66.98 ? C3 OLC 309 A 1 
HETATM 18 C C2 OLC . . . J 3 23.201 13.459 21.435 1 53.42 ? C2 OLC 309 A 1 
HETATM 19 C C21 OLC . . . J 3 26.06 15.288 20.361 1 55.38 ? C21 OLC 309 A 1 
HETATM 20 C C1 OLC . . . J 3 24.356 14.432 21.676 1 51.2 ? C1 OLC 309 A 1 
HETATM 21 C C22 OLC . . . J 3 27.18 16.012 21.103 1 44.29 ? C22 OLC 309 A 1 
HETATM 22 O O19 OLC . . . J 3 24.202 15.4 22.338 1 50.02 ? O19 OLC 309 A 1 
HETATM 23 O O25 OLC . . . J 3 29.536 16.155 21.038 1 45.41 ? O25 OLC 309 A 1 
HETATM 24 O O23 OLC . . . J 3 26.772 17.303 21.451 1 47.56 ? O23 OLC 309 A 1 
HETATM 25 O O20 OLC . . . J 3 25.612 14.199 21.117 1 53.6 ? O20 OLC 309 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           25 
#