data_6CBH # _model_server_result.job_id W3EAgNK1MNiQXbSClaBr0g _model_server_result.datetime_utc '2024-12-03 00:07:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cbh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":205}' # _entry.id 6CBH # _exptl.entry_id 6CBH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CBH _cell.length_a 68.149 _cell.length_b 68.46 _cell.length_c 88.699 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CBH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 171 n n C1 C2 GOL sing 172 n n C1 H11 GOL sing 173 n n C1 H12 GOL sing 174 n n O1 HO1 GOL sing 175 n n C2 O2 GOL sing 176 n n C2 C3 GOL sing 177 n n C2 H2 GOL sing 178 n n O2 HO2 GOL sing 179 n n C3 O3 GOL sing 180 n n C3 H31 GOL sing 181 n n C3 H32 GOL sing 182 n n O3 HO3 GOL sing 183 n n # _atom_sites.entry_id 6CBH _atom_sites.fract_transf_matrix[1][1] 0.014674 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014607 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011274 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 201 115 SO4 SO4 . E 2 SO4 A 1 202 116 SO4 SO4 . F 3 IPA A 1 203 152 IPA IPA . G 4 GOL A 1 204 162 GOL GOL . H 4 GOL A 1 205 161 GOL GOL . I 2 SO4 B 1 201 115 SO4 SO4 . J 2 SO4 B 1 202 116 SO4 SO4 . K 2 SO4 C 1 201 116 SO4 SO4 . L 5 EWJ C 1 202 117 EWJ MIF . M 2 SO4 C 1 203 121 SO4 SO4 . N 3 IPA C 1 204 151 IPA IPA . O 6 HOH A 1 301 36 HOH HOH . O 6 HOH A 2 302 10 HOH HOH . O 6 HOH A 3 303 251 HOH HOH . O 6 HOH A 4 304 57 HOH HOH . O 6 HOH A 5 305 480 HOH HOH . O 6 HOH A 6 306 119 HOH HOH . O 6 HOH A 7 307 176 HOH HOH . O 6 HOH A 8 308 147 HOH HOH . O 6 HOH A 9 309 41 HOH HOH . O 6 HOH A 10 310 685 HOH HOH . O 6 HOH A 11 311 487 HOH HOH . O 6 HOH A 12 312 145 HOH HOH . O 6 HOH A 13 313 111 HOH HOH . O 6 HOH A 14 314 124 HOH HOH . O 6 HOH A 15 315 238 HOH HOH . O 6 HOH A 16 316 140 HOH HOH . O 6 HOH A 17 317 122 HOH HOH . O 6 HOH A 18 318 65 HOH HOH . O 6 HOH A 19 319 151 HOH HOH . O 6 HOH A 20 320 20 HOH HOH . O 6 HOH A 21 321 135 HOH HOH . O 6 HOH A 22 322 146 HOH HOH . O 6 HOH A 23 323 211 HOH HOH . O 6 HOH A 24 324 18 HOH HOH . O 6 HOH A 25 325 209 HOH HOH . O 6 HOH A 26 326 24 HOH HOH . O 6 HOH A 27 327 152 HOH HOH . O 6 HOH A 28 328 474 HOH HOH . O 6 HOH A 29 329 489 HOH HOH . O 6 HOH A 30 330 199 HOH HOH . O 6 HOH A 31 331 173 HOH HOH . O 6 HOH A 32 332 114 HOH HOH . O 6 HOH A 33 333 198 HOH HOH . O 6 HOH A 34 334 56 HOH HOH . O 6 HOH A 35 335 19 HOH HOH . O 6 HOH A 36 336 84 HOH HOH . O 6 HOH A 37 337 194 HOH HOH . O 6 HOH A 38 338 250 HOH HOH . O 6 HOH A 39 339 89 HOH HOH . O 6 HOH A 40 340 497 HOH HOH . O 6 HOH A 41 341 231 HOH HOH . O 6 HOH A 42 342 444 HOH HOH . O 6 HOH A 43 343 179 HOH HOH . O 6 HOH A 44 344 402 HOH HOH . O 6 HOH A 45 345 8 HOH HOH . O 6 HOH A 46 346 314 HOH HOH . O 6 HOH A 47 347 169 HOH HOH . O 6 HOH A 48 348 163 HOH HOH . O 6 HOH A 49 349 627 HOH HOH . O 6 HOH A 50 350 257 HOH HOH . O 6 HOH A 51 351 26 HOH HOH . O 6 HOH A 52 352 14 HOH HOH . O 6 HOH A 53 353 120 HOH HOH . O 6 HOH A 54 354 63 HOH HOH . O 6 HOH A 55 355 226 HOH HOH . O 6 HOH A 56 356 245 HOH HOH . O 6 HOH A 57 357 99 HOH HOH . O 6 HOH A 58 358 371 HOH HOH . O 6 HOH A 59 359 879 HOH HOH . O 6 HOH A 60 360 323 HOH HOH . O 6 HOH A 61 361 175 HOH HOH . O 6 HOH A 62 362 1093 HOH HOH . O 6 HOH A 63 363 86 HOH HOH . O 6 HOH A 64 364 475 HOH HOH . O 6 HOH A 65 365 59 HOH HOH . O 6 HOH A 66 366 410 HOH HOH . O 6 HOH A 67 367 282 HOH HOH . O 6 HOH A 68 368 411 HOH HOH . O 6 HOH A 69 369 380 HOH HOH . O 6 HOH A 70 370 403 HOH HOH . O 6 HOH A 71 371 425 HOH HOH . O 6 HOH A 72 372 335 HOH HOH . O 6 HOH A 73 373 46 HOH HOH . O 6 HOH A 74 374 1081 HOH HOH . O 6 HOH A 75 375 200 HOH HOH . O 6 HOH A 76 376 882 HOH HOH . O 6 HOH A 77 377 454 HOH HOH . O 6 HOH A 78 378 408 HOH HOH . O 6 HOH A 79 379 677 HOH HOH . O 6 HOH A 80 380 399 HOH HOH . P 6 HOH B 1 301 32 HOH HOH . P 6 HOH B 2 302 117 HOH HOH . P 6 HOH B 3 303 665 HOH HOH . P 6 HOH B 4 304 483 HOH HOH . P 6 HOH B 5 305 30 HOH HOH . P 6 HOH B 6 306 228 HOH HOH . P 6 HOH B 7 307 37 HOH HOH . P 6 HOH B 8 308 98 HOH HOH . P 6 HOH B 9 309 501 HOH HOH . P 6 HOH B 10 310 899 HOH HOH . P 6 HOH B 11 311 197 HOH HOH . P 6 HOH B 12 312 297 HOH HOH . P 6 HOH B 13 313 53 HOH HOH . P 6 HOH B 14 314 61 HOH HOH . P 6 HOH B 15 315 909 HOH HOH . P 6 HOH B 16 316 187 HOH HOH . P 6 HOH B 17 317 108 HOH HOH . P 6 HOH B 18 318 204 HOH HOH . P 6 HOH B 19 319 129 HOH HOH . P 6 HOH B 20 320 52 HOH HOH . P 6 HOH B 21 321 97 HOH HOH . P 6 HOH B 22 322 178 HOH HOH . P 6 HOH B 23 323 203 HOH HOH . P 6 HOH B 24 324 45 HOH HOH . P 6 HOH B 25 325 113 HOH HOH . P 6 HOH B 26 326 81 HOH HOH . P 6 HOH B 27 327 4 HOH HOH . P 6 HOH B 28 328 101 HOH HOH . P 6 HOH B 29 329 219 HOH HOH . P 6 HOH B 30 330 16 HOH HOH . P 6 HOH B 31 331 2 HOH HOH . P 6 HOH B 32 332 100 HOH HOH . P 6 HOH B 33 333 91 HOH HOH . P 6 HOH B 34 334 174 HOH HOH . P 6 HOH B 35 335 259 HOH HOH . P 6 HOH B 36 336 233 HOH HOH . P 6 HOH B 37 337 17 HOH HOH . P 6 HOH B 38 338 127 HOH HOH . P 6 HOH B 39 339 161 HOH HOH . P 6 HOH B 40 340 193 HOH HOH . P 6 HOH B 41 341 9 HOH HOH . P 6 HOH B 42 342 206 HOH HOH . P 6 HOH B 43 343 550 HOH HOH . P 6 HOH B 44 344 503 HOH HOH . P 6 HOH B 45 345 264 HOH HOH . P 6 HOH B 46 346 149 HOH HOH . P 6 HOH B 47 347 213 HOH HOH . P 6 HOH B 48 348 3 HOH HOH . P 6 HOH B 49 349 753 HOH HOH . P 6 HOH B 50 350 5 HOH HOH . P 6 HOH B 51 351 134 HOH HOH . P 6 HOH B 52 352 150 HOH HOH . P 6 HOH B 53 353 22 HOH HOH . P 6 HOH B 54 354 35 HOH HOH . P 6 HOH B 55 355 160 HOH HOH . P 6 HOH B 56 356 273 HOH HOH . P 6 HOH B 57 357 118 HOH HOH . P 6 HOH B 58 358 799 HOH HOH . P 6 HOH B 59 359 109 HOH HOH . P 6 HOH B 60 360 144 HOH HOH . P 6 HOH B 61 361 476 HOH HOH . P 6 HOH B 62 362 182 HOH HOH . P 6 HOH B 63 363 12 HOH HOH . P 6 HOH B 64 364 80 HOH HOH . P 6 HOH B 65 365 39 HOH HOH . P 6 HOH B 66 366 243 HOH HOH . P 6 HOH B 67 367 270 HOH HOH . P 6 HOH B 68 368 248 HOH HOH . P 6 HOH B 69 369 279 HOH HOH . P 6 HOH B 70 370 236 HOH HOH . P 6 HOH B 71 371 47 HOH HOH . P 6 HOH B 72 372 975 HOH HOH . P 6 HOH B 73 373 196 HOH HOH . P 6 HOH B 74 374 462 HOH HOH . P 6 HOH B 75 375 95 HOH HOH . P 6 HOH B 76 376 472 HOH HOH . P 6 HOH B 77 377 461 HOH HOH . P 6 HOH B 78 378 105 HOH HOH . P 6 HOH B 79 379 54 HOH HOH . P 6 HOH B 80 380 25 HOH HOH . P 6 HOH B 81 381 737 HOH HOH . P 6 HOH B 82 382 102 HOH HOH . P 6 HOH B 83 383 512 HOH HOH . P 6 HOH B 84 384 64 HOH HOH . P 6 HOH B 85 385 186 HOH HOH . P 6 HOH B 86 386 660 HOH HOH . P 6 HOH B 87 387 533 HOH HOH . P 6 HOH B 88 388 261 HOH HOH . P 6 HOH B 89 389 75 HOH HOH . P 6 HOH B 90 390 167 HOH HOH . P 6 HOH B 91 391 70 HOH HOH . P 6 HOH B 92 392 664 HOH HOH . P 6 HOH B 93 393 395 HOH HOH . P 6 HOH B 94 394 671 HOH HOH . P 6 HOH B 95 395 74 HOH HOH . P 6 HOH B 96 396 405 HOH HOH . P 6 HOH B 97 397 62 HOH HOH . P 6 HOH B 98 398 106 HOH HOH . P 6 HOH B 99 399 158 HOH HOH . P 6 HOH B 100 400 427 HOH HOH . P 6 HOH B 101 401 669 HOH HOH . P 6 HOH B 102 402 876 HOH HOH . P 6 HOH B 103 403 29 HOH HOH . P 6 HOH B 104 404 247 HOH HOH . P 6 HOH B 105 405 164 HOH HOH . P 6 HOH B 106 406 49 HOH HOH . P 6 HOH B 107 407 398 HOH HOH . P 6 HOH B 108 408 880 HOH HOH . P 6 HOH B 109 409 414 HOH HOH . P 6 HOH B 110 410 397 HOH HOH . P 6 HOH B 111 411 422 HOH HOH . P 6 HOH B 112 412 334 HOH HOH . P 6 HOH B 113 413 396 HOH HOH . P 6 HOH B 114 414 55 HOH HOH . Q 6 HOH C 1 301 79 HOH HOH . Q 6 HOH C 2 302 23 HOH HOH . Q 6 HOH C 3 303 7 HOH HOH . Q 6 HOH C 4 304 195 HOH HOH . Q 6 HOH C 5 305 469 HOH HOH . Q 6 HOH C 6 306 165 HOH HOH . Q 6 HOH C 7 307 138 HOH HOH . Q 6 HOH C 8 308 28 HOH HOH . Q 6 HOH C 9 309 479 HOH HOH . Q 6 HOH C 10 310 404 HOH HOH . Q 6 HOH C 11 311 125 HOH HOH . Q 6 HOH C 12 312 210 HOH HOH . Q 6 HOH C 13 313 44 HOH HOH . Q 6 HOH C 14 314 208 HOH HOH . Q 6 HOH C 15 315 13 HOH HOH . Q 6 HOH C 16 316 177 HOH HOH . Q 6 HOH C 17 317 275 HOH HOH . Q 6 HOH C 18 318 31 HOH HOH . Q 6 HOH C 19 319 11 HOH HOH . Q 6 HOH C 20 320 51 HOH HOH . Q 6 HOH C 21 321 133 HOH HOH . Q 6 HOH C 22 322 485 HOH HOH . Q 6 HOH C 23 323 333 HOH HOH . Q 6 HOH C 24 324 6 HOH HOH . Q 6 HOH C 25 325 926 HOH HOH . Q 6 HOH C 26 326 189 HOH HOH . Q 6 HOH C 27 327 60 HOH HOH . Q 6 HOH C 28 328 153 HOH HOH . Q 6 HOH C 29 329 78 HOH HOH . Q 6 HOH C 30 330 96 HOH HOH . Q 6 HOH C 31 331 104 HOH HOH . Q 6 HOH C 32 332 126 HOH HOH . Q 6 HOH C 33 333 121 HOH HOH . Q 6 HOH C 34 334 88 HOH HOH . Q 6 HOH C 35 335 499 HOH HOH . Q 6 HOH C 36 336 107 HOH HOH . Q 6 HOH C 37 337 515 HOH HOH . Q 6 HOH C 38 338 83 HOH HOH . Q 6 HOH C 39 339 477 HOH HOH . Q 6 HOH C 40 340 38 HOH HOH . Q 6 HOH C 41 341 185 HOH HOH . Q 6 HOH C 42 342 455 HOH HOH . Q 6 HOH C 43 343 467 HOH HOH . Q 6 HOH C 44 344 253 HOH HOH . Q 6 HOH C 45 345 148 HOH HOH . Q 6 HOH C 46 346 762 HOH HOH . Q 6 HOH C 47 347 143 HOH HOH . Q 6 HOH C 48 348 421 HOH HOH . Q 6 HOH C 49 349 141 HOH HOH . Q 6 HOH C 50 350 33 HOH HOH . Q 6 HOH C 51 351 48 HOH HOH . Q 6 HOH C 52 352 27 HOH HOH . Q 6 HOH C 53 353 1 HOH HOH . Q 6 HOH C 54 354 128 HOH HOH . Q 6 HOH C 55 355 50 HOH HOH . Q 6 HOH C 56 356 42 HOH HOH . Q 6 HOH C 57 357 171 HOH HOH . Q 6 HOH C 58 358 139 HOH HOH . Q 6 HOH C 59 359 494 HOH HOH . Q 6 HOH C 60 360 183 HOH HOH . Q 6 HOH C 61 361 202 HOH HOH . Q 6 HOH C 62 362 131 HOH HOH . Q 6 HOH C 63 363 447 HOH HOH . Q 6 HOH C 64 364 468 HOH HOH . Q 6 HOH C 65 365 123 HOH HOH . Q 6 HOH C 66 366 166 HOH HOH . Q 6 HOH C 67 367 142 HOH HOH . Q 6 HOH C 68 368 240 HOH HOH . Q 6 HOH C 69 369 159 HOH HOH . Q 6 HOH C 70 370 207 HOH HOH . Q 6 HOH C 71 371 136 HOH HOH . Q 6 HOH C 72 372 115 HOH HOH . Q 6 HOH C 73 373 132 HOH HOH . Q 6 HOH C 74 374 15 HOH HOH . Q 6 HOH C 75 375 34 HOH HOH . Q 6 HOH C 76 376 67 HOH HOH . Q 6 HOH C 77 377 223 HOH HOH . Q 6 HOH C 78 378 188 HOH HOH . Q 6 HOH C 79 379 212 HOH HOH . Q 6 HOH C 80 380 77 HOH HOH . Q 6 HOH C 81 381 180 HOH HOH . Q 6 HOH C 82 382 492 HOH HOH . Q 6 HOH C 83 383 40 HOH HOH . Q 6 HOH C 84 384 295 HOH HOH . Q 6 HOH C 85 385 459 HOH HOH . Q 6 HOH C 86 386 110 HOH HOH . Q 6 HOH C 87 387 439 HOH HOH . Q 6 HOH C 88 388 458 HOH HOH . Q 6 HOH C 89 389 683 HOH HOH . Q 6 HOH C 90 390 1100 HOH HOH . Q 6 HOH C 91 391 319 HOH HOH . Q 6 HOH C 92 392 43 HOH HOH . Q 6 HOH C 93 393 82 HOH HOH . Q 6 HOH C 94 394 76 HOH HOH . Q 6 HOH C 95 395 423 HOH HOH . Q 6 HOH C 96 396 407 HOH HOH . Q 6 HOH C 97 397 349 HOH HOH . Q 6 HOH C 98 398 246 HOH HOH . Q 6 HOH C 99 399 667 HOH HOH . Q 6 HOH C 100 400 934 HOH HOH . Q 6 HOH C 101 401 170 HOH HOH . Q 6 HOH C 102 402 155 HOH HOH . Q 6 HOH C 103 403 21 HOH HOH . Q 6 HOH C 104 404 413 HOH HOH . Q 6 HOH C 105 405 424 HOH HOH . Q 6 HOH C 106 406 266 HOH HOH . Q 6 HOH C 107 407 157 HOH HOH . Q 6 HOH C 108 408 274 HOH HOH . Q 6 HOH C 109 409 418 HOH HOH . Q 6 HOH C 110 410 68 HOH HOH . Q 6 HOH C 111 411 1119 HOH HOH . Q 6 HOH C 112 412 670 HOH HOH . Q 6 HOH C 113 413 239 HOH HOH . Q 6 HOH C 114 414 72 HOH HOH . Q 6 HOH C 115 415 401 HOH HOH . Q 6 HOH C 116 416 674 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 -26.835 -2.809 -18.091 1 38.31 ? C1 GOL 205 A 1 HETATM 2 O O1 GOL . . . H 4 -26.843 -1.765 -17.094 1 34.5 ? O1 GOL 205 A 1 HETATM 3 C C2 GOL . . . H 4 -26.648 -4.162 -17.398 1 39.18 ? C2 GOL 205 A 1 HETATM 4 O O2 GOL . . . H 4 -27.325 -4.118 -16.136 1 41.26 ? O2 GOL 205 A 1 HETATM 5 C C3 GOL . . . H 4 -27.146 -5.413 -18.144 1 40.26 ? C3 GOL 205 A 1 HETATM 6 O O3 GOL . . . H 4 -27.396 -5.215 -19.541 1 42.21 ? O3 GOL 205 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 6 #