data_6CBQ # _model_server_result.job_id BN349JM3mf7krIAwNveiBw _model_server_result.datetime_utc '2024-11-04 22:48:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cbq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6CBQ # _exptl.entry_id 6CBQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.513 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2-hexyl-N-[(3S)-2-oxooxolan-3-yl]decanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CBQ _cell.length_a 94.12 _cell.length_b 94.12 _cell.length_c 105.68 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CBQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C20 H37 N O3' _chem_comp.formula_weight 339.513 _chem_comp.id EVY _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2-hexyl-N-[(3S)-2-oxooxolan-3-yl]decanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C18 EVY sing 83 n n C18 C17 EVY sing 84 n n C17 C16 EVY sing 85 n n C16 C15 EVY sing 86 n n C05 C04 EVY sing 87 n n C05 C01 EVY sing 88 n n C04 OAP EVY sing 89 n n C13 C11 EVY sing 90 n n C13 C14 EVY sing 91 n n C11 C10 EVY sing 92 n n C15 C14 EVY sing 93 n n C01 N07 EVY sing 94 n n C01 C02 EVY sing 95 n n N07 C08 EVY sing 96 n n OAP C02 EVY sing 97 n n C08 C10 EVY sing 98 n n C08 O09 EVY doub 99 n n C10 C22 EVY sing 100 n n C02 O06 EVY doub 101 n n C22 C23 EVY sing 102 n n C23 C24 EVY sing 103 n n C24 C25 EVY sing 104 n n C25 C26 EVY sing 105 n n C26 C27 EVY sing 106 n n C19 H1 EVY sing 107 n n C19 H2 EVY sing 108 n n C19 H3 EVY sing 109 n n C18 H4 EVY sing 110 n n C18 H5 EVY sing 111 n n C17 H6 EVY sing 112 n n C17 H7 EVY sing 113 n n C16 H8 EVY sing 114 n n C16 H9 EVY sing 115 n n C15 H10 EVY sing 116 n n C15 H11 EVY sing 117 n n C14 H12 EVY sing 118 n n C14 H13 EVY sing 119 n n C13 H14 EVY sing 120 n n C13 H15 EVY sing 121 n n C11 H16 EVY sing 122 n n C11 H17 EVY sing 123 n n C10 H18 EVY sing 124 n n C22 H19 EVY sing 125 n n C22 H20 EVY sing 126 n n C23 H21 EVY sing 127 n n C23 H22 EVY sing 128 n n C24 H23 EVY sing 129 n n C24 H24 EVY sing 130 n n C25 H25 EVY sing 131 n n C25 H26 EVY sing 132 n n C26 H27 EVY sing 133 n n C26 H28 EVY sing 134 n n C27 H29 EVY sing 135 n n C27 H30 EVY sing 136 n n C27 H31 EVY sing 137 n n N07 H32 EVY sing 138 n n C01 H33 EVY sing 139 n n C05 H34 EVY sing 140 n n C05 H35 EVY sing 141 n n C04 H36 EVY sing 142 n n C04 H37 EVY sing 143 n n # _atom_sites.entry_id 6CBQ _atom_sites.fract_transf_matrix[1][1] 0.010625 _atom_sites.fract_transf_matrix[1][2] 0.006134 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012268 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009463 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EVY A 1 301 1 EVY S3A . D 2 EVY B 1 301 2 EVY S3A . E 3 HOH A 1 401 1 HOH HOH . E 3 HOH A 2 402 4 HOH HOH . E 3 HOH A 3 403 5 HOH HOH . E 3 HOH A 4 404 8 HOH HOH . E 3 HOH A 5 405 2 HOH HOH . E 3 HOH A 6 406 3 HOH HOH . E 3 HOH A 7 407 6 HOH HOH . E 3 HOH A 8 408 10 HOH HOH . F 3 HOH B 1 401 7 HOH HOH . F 3 HOH B 2 402 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C19 EVY . . . D 2 19.525 -23.671 -15.74 1 109.34 ? C19 EVY 301 B 1 HETATM 2 C C18 EVY . . . D 2 19.849 -25.019 -16.374 1 102.61 ? C18 EVY 301 B 1 HETATM 3 C C17 EVY . . . D 2 19.966 -24.939 -17.904 1 98.6 ? C17 EVY 301 B 1 HETATM 4 C C16 EVY . . . D 2 19.005 -23.911 -18.522 1 102.91 ? C16 EVY 301 B 1 HETATM 5 C C15 EVY . . . D 2 19.734 -22.838 -19.345 1 108.33 ? C15 EVY 301 B 1 HETATM 6 C C14 EVY . . . D 2 18.898 -21.569 -19.615 1 106.6 ? C14 EVY 301 B 1 HETATM 7 C C13 EVY . . . D 2 19.274 -20.409 -18.676 1 109.45 ? C13 EVY 301 B 1 HETATM 8 C C11 EVY . . . D 2 19.938 -19.206 -19.379 1 107.96 ? C11 EVY 301 B 1 HETATM 9 C C10 EVY . . . D 2 19.21 -18.687 -20.645 1 109.41 ? C10 EVY 301 B 1 HETATM 10 C C22 EVY . . . D 2 20.146 -18.655 -21.896 1 109.41 ? C22 EVY 301 B 1 HETATM 11 C C23 EVY . . . D 2 19.55 -17.957 -23.131 1 105.63 ? C23 EVY 301 B 1 HETATM 12 C C24 EVY . . . D 2 20.309 -18.278 -24.431 1 104.16 ? C24 EVY 301 B 1 HETATM 13 C C25 EVY . . . D 2 19.457 -18.007 -25.683 1 105.07 ? C25 EVY 301 B 1 HETATM 14 C C26 EVY . . . D 2 20.247 -18.184 -26.987 1 103.18 ? C26 EVY 301 B 1 HETATM 15 C C27 EVY . . . D 2 19.344 -18.56 -28.156 1 98.4 ? C27 EVY 301 B 1 HETATM 16 C C08 EVY . . . D 2 18.774 -17.239 -20.364 1 111.05 ? C08 EVY 301 B 1 HETATM 17 O O09 EVY . . . D 2 17.6 -16.95 -20.182 1 114.04 ? O09 EVY 301 B 1 HETATM 18 N N07 EVY . . . D 2 19.756 -16.24 -20.309 1 109.92 ? N07 EVY 301 B 1 HETATM 19 C C01 EVY . . . D 2 19.433 -14.841 -20.05 1 117.9 ? C01 EVY 301 B 1 HETATM 20 C C05 EVY . . . D 2 20.016 -14.313 -18.719 1 117.72 ? C05 EVY 301 B 1 HETATM 21 C C04 EVY . . . D 2 21.165 -13.378 -19.126 1 114.69 ? C04 EVY 301 B 1 HETATM 22 O OAP EVY . . . D 2 20.94 -13.002 -20.477 1 112.73 ? OAP EVY 301 B 1 HETATM 23 C C02 EVY . . . D 2 20.079 -13.893 -21.066 1 118.42 ? C02 EVY 301 B 1 HETATM 24 O O06 EVY . . . D 2 19.955 -13.815 -22.261 1 122.93 ? O06 EVY 301 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #