data_6CBY
#
_model_server_result.job_id            b87P-Y3LzTSARmHUjLx-NQ 
_model_server_result.datetime_utc      '2024-11-14 06:45:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6cby 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1003}' 
#
_entry.id    6CBY 
#
_exptl.entry_id    6CBY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.42 
_cell.angle_gamma         90 
_cell.entry_id            6CBY 
_cell.length_a            57.819 
_cell.length_b            117.579 
_cell.length_c            65.013 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CBY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1 
B,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 53 A CYS 52 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? 
metalc ? metalc2 A SG CYS 56 A CYS 55 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc3 A SG CYS 66 A CYS 65 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? 
metalc ? metalc4 A SG CYS 69 A CYS 68 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc5 A SG CYS 75 A CYS 74 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc6 A SG CYS 79 A CYS 78 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? 
metalc ? metalc7 A NE2 HIS 87 A HIS 86 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc8 A SG CYS 91 A CYS 90 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc9 A SG CYS 210 A CYS 209 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? 
metalc ? metalc10 A SG CYS 263 A CYS 262 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc11 A SG CYS 265 A CYS 264 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? 
metalc ? metalc12 A SG CYS 268 A CYS 267 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? 
metalc ? metalc13 B SG CYS 53 B CYS 52 1_555 G ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc14 B SG CYS 56 B CYS 55 1_555 G ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc15 B SG CYS 66 B CYS 65 1_555 H ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? 
metalc ? metalc16 B SG CYS 69 B CYS 68 1_555 H ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? 
metalc ? metalc17 B SG CYS 75 B CYS 74 1_555 G ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? 
metalc ? metalc18 B SG CYS 79 B CYS 78 1_555 G ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc19 B NE2 HIS 87 B HIS 86 1_555 H ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc20 B SG CYS 91 B CYS 90 1_555 H ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? 
metalc ? metalc21 B SG CYS 210 B CYS 209 1_555 I ZN ZN . B ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? 
metalc ? metalc22 B SG CYS 263 B CYS 262 1_555 I ZN ZN . B ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? 
metalc ? metalc23 B SG CYS 265 B CYS 264 1_555 I ZN ZN . B ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc24 B SG CYS 268 B CYS 267 1_555 I ZN ZN . B ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6CBY 
_atom_sites.fract_transf_matrix[1][1]    0.017295 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000731 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008505 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015395 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 1001 1001 ZN ZN . 
D 2 ZN A 1 1002 1002 ZN ZN . 
E 2 ZN A 1 1003 1003 ZN ZN . 
F 3 EW4 A 1 1004 2000 EW4 XXX . 
G 2 ZN B 1 1001 1001 ZN ZN . 
H 2 ZN B 1 1002 1002 ZN ZN . 
I 2 ZN B 1 1003 1003 ZN ZN . 
J 3 EW4 B 1 1004 2000 EW4 XXX . 
K 4 HOH A 1 1101 2 HOH HOH . 
K 4 HOH A 2 1102 40 HOH HOH . 
K 4 HOH A 3 1103 22 HOH HOH . 
K 4 HOH A 4 1104 1 HOH HOH . 
K 4 HOH A 5 1105 27 HOH HOH . 
K 4 HOH A 6 1106 6 HOH HOH . 
K 4 HOH A 7 1107 10 HOH HOH . 
K 4 HOH A 8 1108 43 HOH HOH . 
K 4 HOH A 9 1109 46 HOH HOH . 
K 4 HOH A 10 1110 28 HOH HOH . 
K 4 HOH A 11 1111 30 HOH HOH . 
K 4 HOH A 12 1112 3 HOH HOH . 
K 4 HOH A 13 1113 12 HOH HOH . 
K 4 HOH A 14 1114 14 HOH HOH . 
K 4 HOH A 15 1115 42 HOH HOH . 
K 4 HOH A 16 1116 23 HOH HOH . 
K 4 HOH A 17 1117 25 HOH HOH . 
K 4 HOH A 18 1118 41 HOH HOH . 
K 4 HOH A 19 1119 21 HOH HOH . 
K 4 HOH A 20 1120 13 HOH HOH . 
K 4 HOH A 21 1121 39 HOH HOH . 
K 4 HOH A 22 1122 26 HOH HOH . 
K 4 HOH A 23 1123 20 HOH HOH . 
K 4 HOH A 24 1124 45 HOH HOH . 
K 4 HOH A 25 1125 7 HOH HOH . 
K 4 HOH A 26 1126 11 HOH HOH . 
K 4 HOH A 27 1127 44 HOH HOH . 
K 4 HOH A 28 1128 24 HOH HOH . 
K 4 HOH A 29 1129 29 HOH HOH . 
K 4 HOH A 30 1130 4 HOH HOH . 
K 4 HOH A 31 1131 5 HOH HOH . 
L 4 HOH B 1 1101 18 HOH HOH . 
L 4 HOH B 2 1102 53 HOH HOH . 
L 4 HOH B 3 1103 52 HOH HOH . 
L 4 HOH B 4 1104 34 HOH HOH . 
L 4 HOH B 5 1105 17 HOH HOH . 
L 4 HOH B 6 1106 49 HOH HOH . 
L 4 HOH B 7 1107 16 HOH HOH . 
L 4 HOH B 8 1108 51 HOH HOH . 
L 4 HOH B 9 1109 48 HOH HOH . 
L 4 HOH B 10 1110 35 HOH HOH . 
L 4 HOH B 11 1111 50 HOH HOH . 
L 4 HOH B 12 1112 37 HOH HOH . 
L 4 HOH B 13 1113 19 HOH HOH . 
L 4 HOH B 14 1114 9 HOH HOH . 
L 4 HOH B 15 1115 32 HOH HOH . 
L 4 HOH B 16 1116 31 HOH HOH . 
L 4 HOH B 17 1117 47 HOH HOH . 
L 4 HOH B 18 1118 38 HOH HOH . 
L 4 HOH B 19 1119 33 HOH HOH . 
L 4 HOH B 20 1120 15 HOH HOH . 
L 4 HOH B 21 1121 36 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -12.637 
_atom_site.Cartn_y               -3.41 
_atom_site.Cartn_z               13.117 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        39.71 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1003 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#