data_6CC9 # _model_server_result.job_id cX9gk6YXM80TGYjWZipiIw _model_server_result.datetime_utc '2024-11-22 19:24:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cc9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"TA","auth_seq_id":232}' # _entry.id 6CC9 # _exptl.entry_id 6CC9 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 788.043 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description O-[(S)-({(2R)-2,3-bis[(9Z)-octadec-9-enoyloxy]propyl}oxy)(hydroxy)phosphoryl]-L-serine _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 NA N N ? 4 OA N N ? 4 PA N N ? 4 QA N N ? 4 RA N N ? 4 SA N N ? 4 TA N N ? 4 XA N N ? 4 BC N N ? 4 CC N N ? 4 DC N N ? 4 EC N N ? 4 FC N N ? 4 GC N N ? 4 HC N N # _chem_comp.formula 'C42 H78 N O10 P' _chem_comp.formula_weight 788.043 _chem_comp.id 17F _chem_comp.mon_nstd_flag . _chem_comp.name O-[(S)-({(2R)-2,3-bis[(9Z)-octadec-9-enoyloxy]propyl}oxy)(hydroxy)phosphoryl]-L-serine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1,2-Dioleoyl-sn-glycero-3-phospho-L-serine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O3 17F sing 1 n n N1 C2 17F sing 2 n n O1 P1 17F doub 3 n n P1 O6 17F sing 4 n n C2 C1 17F sing 5 n n O2 P1 17F sing 6 n n C3 C2 17F sing 7 n n C3 O5 17F sing 8 n n O3 P1 17F sing 9 n n C4 C5 17F sing 10 n n O4 C3 17F doub 11 n n C5 C6 17F sing 12 n n C5 O9 17F sing 13 n n C6 O7 17F sing 14 n n O6 C4 17F sing 15 n n C7 C8 17F sing 16 n n O7 C7 17F sing 17 n n C8 C9 17F sing 18 n n O8 C7 17F doub 19 n n C9 C10 17F sing 20 n n O9 C17 17F sing 21 n n C10 C11 17F sing 22 n n C11 C12 17F sing 23 n n C12 C1X 17F sing 24 n n C17 O10 17F doub 25 n n C17 C18 17F sing 26 n n C18 C19 17F sing 27 n n C19 C20 17F sing 28 n n C20 C1Y 17F sing 29 n n C1Y C1Z 17F sing 30 n n C1X C2X 17F sing 31 n n C2X C21 17F sing 32 n n C21 C22 17F doub 33 z n C22 C23 17F sing 34 n n C23 C24 17F sing 35 n n C24 C25 17F sing 36 n n C25 C26 17F sing 37 n n C26 C27 17F sing 38 n n C27 C28 17F sing 39 n n C28 C29 17F sing 40 n n C29 C30 17F sing 41 n n C1Z C31 17F sing 42 n n C31 C32 17F sing 43 n n C32 C33 17F sing 44 n n C33 C34 17F doub 45 z n C34 C35 17F sing 46 n n C35 C36 17F sing 47 n n C36 C37 17F sing 48 n n C37 C38 17F sing 49 n n C38 C39 17F sing 50 n n C39 C40 17F sing 51 n n C40 C41 17F sing 52 n n C41 C42 17F sing 53 n n C1 H1 17F sing 54 n n C1 H1A 17F sing 55 n n N1 HN1 17F sing 56 n n N1 HN1A 17F sing 57 n n C2 H2 17F sing 58 n n O2 HO2 17F sing 59 n n C4 H4 17F sing 60 n n C4 H4A 17F sing 61 n n C5 H5 17F sing 62 n n O5 HO5 17F sing 63 n n C6 H6 17F sing 64 n n C6 H6A 17F sing 65 n n C8 H8 17F sing 66 n n C8 H8A 17F sing 67 n n C9 H9 17F sing 68 n n C9 H9A 17F sing 69 n n C10 H10 17F sing 70 n n C10 H10A 17F sing 71 n n C11 H11 17F sing 72 n n C11 H11A 17F sing 73 n n C12 H12 17F sing 74 n n C12 H12A 17F sing 75 n n C18 H18 17F sing 76 n n C18 H18A 17F sing 77 n n C19 H19 17F sing 78 n n C19 H19A 17F sing 79 n n C20 H20 17F sing 80 n n C20 H20A 17F sing 81 n n C1X H29 17F sing 82 n n C1X H30 17F sing 83 n n C1Y H31 17F sing 84 n n C1Y H32 17F sing 85 n n C1Z H33 17F sing 86 n n C1Z H34 17F sing 87 n n C2X H35 17F sing 88 n n C2X H36 17F sing 89 n n C21 H37 17F sing 90 n n C22 H38 17F sing 91 n n C23 H39 17F sing 92 n n C23 H40 17F sing 93 n n C24 H41 17F sing 94 n n C24 H42 17F sing 95 n n C25 H43 17F sing 96 n n C25 H44 17F sing 97 n n C26 H45 17F sing 98 n n C26 H46 17F sing 99 n n C27 H47 17F sing 100 n n C27 H48 17F sing 101 n n C28 H49 17F sing 102 n n C28 H50 17F sing 103 n n C29 H51 17F sing 104 n n C29 H52 17F sing 105 n n C30 H53 17F sing 106 n n C30 H54 17F sing 107 n n C30 H55 17F sing 108 n n C31 H56 17F sing 109 n n C31 H57 17F sing 110 n n C32 H58 17F sing 111 n n C32 H59 17F sing 112 n n C33 H60 17F sing 113 n n C34 H61 17F sing 114 n n C35 H62 17F sing 115 n n C35 H63 17F sing 116 n n C36 H64 17F sing 117 n n C36 H65 17F sing 118 n n C37 H66 17F sing 119 n n C37 H67 17F sing 120 n n C38 H68 17F sing 121 n n C38 H69 17F sing 122 n n C39 H70 17F sing 123 n n C39 H71 17F sing 124 n n C40 H72 17F sing 125 n n C40 H73 17F sing 126 n n C41 H74 17F sing 127 n n C41 H75 17F sing 128 n n C42 H76 17F sing 129 n n C42 H77 17F sing 130 n n C42 H78 17F sing 131 n n # _atom_sites.entry_id 6CC9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 PCW A 1 401 2 PCW DOC . E 3 PCW A 1 402 4 PCW DOC . F 3 PCW A 1 403 15 PCW DOC . G 3 PCW A 1 404 20 PCW DOC . H 3 PCW A 1 405 21 PCW DOC . I 3 PCW A 1 406 32 PCW DOC . J 4 17F A 1 407 33 17F DOS . K 3 PCW A 1 408 41 PCW DOC . L 3 PCW A 1 409 44 PCW DOC . M 3 PCW A 1 410 59 PCW DOC . N 3 PCW A 1 411 61 PCW DOC . O 3 PCW B 1 201 1 PCW DOC . P 3 PCW B 1 202 3 PCW DOC . Q 3 PCW B 1 203 5 PCW DOC . R 3 PCW B 1 204 6 PCW DOC . S 3 PCW B 1 205 7 PCW DOC . T 3 PCW B 1 206 9 PCW DOC . U 3 PCW B 1 207 10 PCW DOC . V 3 PCW B 1 208 11 PCW DOC . W 3 PCW B 1 209 12 PCW DOC . X 3 PCW B 1 210 13 PCW DOC . Y 3 PCW B 1 211 14 PCW DOC . Z 3 PCW B 1 212 16 PCW DOC . AA 3 PCW B 1 213 17 PCW DOC . BA 3 PCW B 1 214 18 PCW DOC . CA 3 PCW B 1 215 19 PCW DOC . DA 3 PCW B 1 216 22 PCW DOC . EA 3 PCW B 1 217 23 PCW DOC . FA 3 PCW B 1 218 24 PCW DOC . GA 3 PCW B 1 219 25 PCW DOC . HA 3 PCW B 1 220 26 PCW DOC . IA 3 PCW B 1 221 27 PCW DOC . JA 3 PCW B 1 222 28 PCW DOC . KA 3 PCW B 1 223 29 PCW DOC . LA 3 PCW B 1 224 30 PCW DOC . MA 3 PCW B 1 225 31 PCW DOC . NA 4 17F B 1 226 34 17F DOS . OA 4 17F B 1 227 35 17F DOS . PA 4 17F B 1 228 36 17F DOS . QA 4 17F B 1 229 37 17F DOS . RA 4 17F B 1 230 38 17F DOS . SA 4 17F B 1 231 39 17F DOS . TA 4 17F B 1 232 40 17F DOS . UA 3 PCW B 1 233 43 PCW DOC . VA 3 PCW B 1 234 63 PCW DOC . WA 3 PCW B 1 235 69 PCW DOC . XA 4 17F B 1 236 75 17F DOS . YA 5 GNP B 1 237 201 GNP GNP . ZA 6 MG B 1 238 202 MG MG2 . AB 7 EWS B 1 239 203 EWS DRG . BB 3 PCW C 1 601 8 PCW DOC . CB 3 PCW C 1 602 42 PCW DOC . DB 3 PCW C 1 603 45 PCW DOC . EB 3 PCW C 1 604 46 PCW DOC . FB 3 PCW C 1 605 47 PCW DOC . GB 3 PCW C 1 606 48 PCW DOC . HB 3 PCW C 1 607 49 PCW DOC . IB 3 PCW C 1 608 50 PCW DOC . JB 3 PCW C 1 609 51 PCW DOC . KB 3 PCW C 1 610 52 PCW DOC . LB 3 PCW C 1 611 53 PCW DOC . MB 3 PCW C 1 612 54 PCW DOC . NB 3 PCW C 1 613 55 PCW DOC . OB 3 PCW C 1 614 56 PCW DOC . PB 3 PCW C 1 615 57 PCW DOC . QB 3 PCW C 1 616 58 PCW DOC . RB 3 PCW C 1 617 60 PCW DOC . SB 3 PCW C 1 618 62 PCW DOC . TB 3 PCW C 1 619 64 PCW DOC . UB 3 PCW C 1 620 65 PCW DOC . VB 3 PCW C 1 621 66 PCW DOC . WB 3 PCW C 1 622 67 PCW DOC . XB 3 PCW C 1 623 68 PCW DOC . YB 3 PCW C 1 624 70 PCW DOC . ZB 3 PCW C 1 625 71 PCW DOC . AC 3 PCW C 1 626 72 PCW DOC . BC 4 17F C 1 627 73 17F DOS . CC 4 17F C 1 628 74 17F DOS . DC 4 17F C 1 629 76 17F DOS . EC 4 17F C 1 630 77 17F DOS . FC 4 17F C 1 631 78 17F DOS . GC 4 17F C 1 632 79 17F DOS . HC 4 17F C 1 633 80 17F DOS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 17F . . . TA 4 -3.487 6.548 -12.296 1 10 0 C1 17F 232 B 1 HETATM 2 N N1 17F . . . TA 4 -1.866 5.791 -14.058 1 10 0 N1 17F 232 B 1 HETATM 3 O O1 17F . . . TA 4 -2.394 4.463 -10.504 1 10 0 O1 17F 232 B 1 HETATM 4 P P1 17F . . . TA 4 -3.717 4.286 -11.203 1 10 0 P1 17F 232 B 1 HETATM 5 C C2 17F . . . TA 4 -2.493 6.929 -13.408 1 10 0 C2 17F 232 B 1 HETATM 6 O O2 17F . . . TA 4 -4.033 2.9 -11.703 1 10 0 O2 17F 232 B 1 HETATM 7 C C3 17F . . . TA 4 -1.396 7.847 -12.838 1 10 0 C3 17F 232 B 1 HETATM 8 O O3 17F . . . TA 4 -3.877 5.222 -12.422 1 10 0 O3 17F 232 B 1 HETATM 9 C C4 17F . . . TA 4 -6.288 4.601 -10.692 1 10 0 C4 17F 232 B 1 HETATM 10 O O4 17F . . . TA 4 -1.677 8.881 -12.236 1 10 0 O4 17F 232 B 1 HETATM 11 C C5 17F . . . TA 4 -7.292 5.036 -9.582 1 10 0 C5 17F 232 B 1 HETATM 12 O O5 17F . . . TA 4 -0.144 7.576 -12.961 1 10 0 O5 17F 232 B 1 HETATM 13 C C6 17F . . . TA 4 -8.584 5.598 -10.222 1 10 0 C6 17F 232 B 1 HETATM 14 O O6 17F . . . TA 4 -4.931 4.68 -10.261 1 10 0 O6 17F 232 B 1 HETATM 15 C C7 17F . . . TA 4 -10.753 5.666 -9.346 1 10 0 C7 17F 232 B 1 HETATM 16 O O7 17F . . . TA 4 -9.514 6.021 -9.24 1 10 0 O7 17F 232 B 1 HETATM 17 C C8 17F . . . TA 4 -11.521 6.306 -8.167 1 10 0 C8 17F 232 B 1 HETATM 18 O O8 17F . . . TA 4 -11.314 4.993 -10.177 1 10 0 O8 17F 232 B 1 HETATM 19 C C9 17F . . . TA 4 -13.055 6.35 -8.387 1 10 0 C9 17F 232 B 1 HETATM 20 O O9 17F . . . TA 4 -7.589 3.979 -8.66 1 10 0 O9 17F 232 B 1 HETATM 21 C C10 17F . . . TA 4 -13.901 6.994 -7.227 1 10 0 C10 17F 232 B 1 HETATM 22 O O10 17F . . . TA 4 -5.845 4.406 -7.215 1 10 0 O10 17F 232 B 1 HETATM 23 C C11 17F . . . TA 4 -13.43 6.635 -5.767 1 10 0 C11 17F 232 B 1 HETATM 24 C C12 17F . . . TA 4 -14.338 7.323 -4.684 1 10 0 C12 17F 232 B 1 HETATM 25 C C17 17F . . . TA 4 -6.553 3.664 -7.907 1 10 0 C17 17F 232 B 1 HETATM 26 C C18 17F . . . TA 4 -6.258 2.178 -7.936 1 10 0 C18 17F 232 B 1 HETATM 27 C C19 17F . . . TA 4 -5.58 1.635 -6.655 1 10 0 C19 17F 232 B 1 HETATM 28 C C20 17F . . . TA 4 -5.616 0.066 -6.573 1 10 0 C20 17F 232 B 1 HETATM 29 C C1X 17F . . . TA 4 -13.869 6.963 -3.267 1 10 0 C1X 17F 232 B 1 HETATM 30 C C1Y 17F . . . TA 4 -4.924 -0.419 -5.277 1 10 0 C1Y 17F 232 B 1 HETATM 31 C C1Z 17F . . . TA 4 -5.932 -1.122 -4.362 1 10 0 C1Z 17F 232 B 1 HETATM 32 C C2X 17F . . . TA 4 -14.779 7.654 -2.139 1 10 0 C2X 17F 232 B 1 HETATM 33 C C21 17F . . . TA 4 -14.163 7.506 -0.714 1 10 0 C21 17F 232 B 1 HETATM 34 C C22 17F . . . TA 4 -14.297 8.365 0.239 1 10 0 C22 17F 232 B 1 HETATM 35 C C23 17F . . . TA 4 -15.034 9.637 0.209 1 10 0 C23 17F 232 B 1 HETATM 36 C C24 17F . . . TA 4 -14.208 10.871 0.564 1 10 0 C24 17F 232 B 1 HETATM 37 C C25 17F . . . TA 4 -14.947 12.204 0.551 1 10 0 C25 17F 232 B 1 HETATM 38 C C26 17F . . . TA 4 -15.463 12.728 1.978 1 10 0 C26 17F 232 B 1 HETATM 39 C C27 17F . . . TA 4 -16.197 14.051 1.948 1 10 0 C27 17F 232 B 1 HETATM 40 C C28 17F . . . TA 4 -16.625 14.402 3.426 1 10 0 C28 17F 232 B 1 HETATM 41 C C29 17F . . . TA 4 -18.062 14.74 3.434 1 10 0 C29 17F 232 B 1 HETATM 42 C C30 17F . . . TA 4 -18.621 15.099 4.778 1 10 0 C30 17F 232 B 1 HETATM 43 C C31 17F . . . TA 4 -7.053 -0.229 -3.714 1 10 0 C31 17F 232 B 1 HETATM 44 C C32 17F . . . TA 4 -8.058 -0.983 -2.802 1 10 0 C32 17F 232 B 1 HETATM 45 C C33 17F . . . TA 4 -9.454 -0.876 -3.402 1 10 0 C33 17F 232 B 1 HETATM 46 C C34 17F . . . TA 4 -10.548 -1.415 -2.875 1 10 0 C34 17F 232 B 1 HETATM 47 C C35 17F . . . TA 4 -10.639 -2.229 -1.605 1 10 0 C35 17F 232 B 1 HETATM 48 C C36 17F . . . TA 4 -11.176 -1.449 -0.369 1 10 0 C36 17F 232 B 1 HETATM 49 C C37 17F . . . TA 4 -12.464 -2.047 0.063 1 10 0 C37 17F 232 B 1 HETATM 50 C C38 17F . . . TA 4 -13.731 -1.267 -0.379 1 10 0 C38 17F 232 B 1 HETATM 51 C C39 17F . . . TA 4 -15.022 -1.95 0.11 1 10 0 C39 17F 232 B 1 HETATM 52 C C40 17F . . . TA 4 -15.761 -1.054 1.114 1 10 0 C40 17F 232 B 1 HETATM 53 C C41 17F . . . TA 4 -17.17 -0.612 0.547 1 10 0 C41 17F 232 B 1 HETATM 54 C C42 17F . . . TA 4 -17.693 0.788 0.884 1 10 0 C42 17F 232 B 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 115 _model_server_stats.query_time_ms 2807 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 54 #