data_6CCX
#
_model_server_result.job_id            pFruK1FIlQB5zp9kusBUvg 
_model_server_result.datetime_utc      '2024-10-18 16:21:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ccx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"DC","auth_seq_id":631}' 
#
_entry.id    6CCX 
#
_exptl.entry_id    6CCX 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              788.043 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            O-[(S)-({(2R)-2,3-bis[(9Z)-octadec-9-enoyloxy]propyl}oxy)(hydroxy)phosphoryl]-L-serine 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 N N N 
? 4 KA N N 
? 4 LA N N 
? 4 MA N N 
? 4 NA N N 
? 4 OA N N 
? 4 PA N N 
? 4 QA N N 
? 4 RA N N 
? 4 VA N N 
? 4 CC N N 
? 4 DC N N 
? 4 EC N N 
? 4 FC N N 
? 4 GC N N 
? 4 HC N N 
#
_chem_comp.formula           'C42 H78 N O10 P' 
_chem_comp.formula_weight    788.043 
_chem_comp.id                17F 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              O-[(S)-({(2R)-2,3-bis[(9Z)-octadec-9-enoyloxy]propyl}oxy)(hydroxy)phosphoryl]-L-serine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1,2-Dioleoyl-sn-glycero-3-phospho-L-serine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O3 17F sing 1 n n 
N1 C2 17F sing 2 n n 
O1 P1 17F doub 3 n n 
P1 O6 17F sing 4 n n 
C2 C1 17F sing 5 n n 
O2 P1 17F sing 6 n n 
C3 C2 17F sing 7 n n 
C3 O5 17F sing 8 n n 
O3 P1 17F sing 9 n n 
C4 C5 17F sing 10 n n 
O4 C3 17F doub 11 n n 
C5 C6 17F sing 12 n n 
C5 O9 17F sing 13 n n 
C6 O7 17F sing 14 n n 
O6 C4 17F sing 15 n n 
C7 C8 17F sing 16 n n 
O7 C7 17F sing 17 n n 
C8 C9 17F sing 18 n n 
O8 C7 17F doub 19 n n 
C9 C10 17F sing 20 n n 
O9 C17 17F sing 21 n n 
C10 C11 17F sing 22 n n 
C11 C12 17F sing 23 n n 
C12 C1X 17F sing 24 n n 
C17 O10 17F doub 25 n n 
C17 C18 17F sing 26 n n 
C18 C19 17F sing 27 n n 
C19 C20 17F sing 28 n n 
C20 C1Y 17F sing 29 n n 
C1Y C1Z 17F sing 30 n n 
C1X C2X 17F sing 31 n n 
C2X C21 17F sing 32 n n 
C21 C22 17F doub 33 z n 
C22 C23 17F sing 34 n n 
C23 C24 17F sing 35 n n 
C24 C25 17F sing 36 n n 
C25 C26 17F sing 37 n n 
C26 C27 17F sing 38 n n 
C27 C28 17F sing 39 n n 
C28 C29 17F sing 40 n n 
C29 C30 17F sing 41 n n 
C1Z C31 17F sing 42 n n 
C31 C32 17F sing 43 n n 
C32 C33 17F sing 44 n n 
C33 C34 17F doub 45 z n 
C34 C35 17F sing 46 n n 
C35 C36 17F sing 47 n n 
C36 C37 17F sing 48 n n 
C37 C38 17F sing 49 n n 
C38 C39 17F sing 50 n n 
C39 C40 17F sing 51 n n 
C40 C41 17F sing 52 n n 
C41 C42 17F sing 53 n n 
C1 H1 17F sing 54 n n 
C1 H1A 17F sing 55 n n 
N1 HN1 17F sing 56 n n 
N1 HN1A 17F sing 57 n n 
C2 H2 17F sing 58 n n 
O2 HO2 17F sing 59 n n 
C4 H4 17F sing 60 n n 
C4 H4A 17F sing 61 n n 
C5 H5 17F sing 62 n n 
O5 HO5 17F sing 63 n n 
C6 H6 17F sing 64 n n 
C6 H6A 17F sing 65 n n 
C8 H8 17F sing 66 n n 
C8 H8A 17F sing 67 n n 
C9 H9 17F sing 68 n n 
C9 H9A 17F sing 69 n n 
C10 H10 17F sing 70 n n 
C10 H10A 17F sing 71 n n 
C11 H11 17F sing 72 n n 
C11 H11A 17F sing 73 n n 
C12 H12 17F sing 74 n n 
C12 H12A 17F sing 75 n n 
C18 H18 17F sing 76 n n 
C18 H18A 17F sing 77 n n 
C19 H19 17F sing 78 n n 
C19 H19A 17F sing 79 n n 
C20 H20 17F sing 80 n n 
C20 H20A 17F sing 81 n n 
C1X H29 17F sing 82 n n 
C1X H30 17F sing 83 n n 
C1Y H31 17F sing 84 n n 
C1Y H32 17F sing 85 n n 
C1Z H33 17F sing 86 n n 
C1Z H34 17F sing 87 n n 
C2X H35 17F sing 88 n n 
C2X H36 17F sing 89 n n 
C21 H37 17F sing 90 n n 
C22 H38 17F sing 91 n n 
C23 H39 17F sing 92 n n 
C23 H40 17F sing 93 n n 
C24 H41 17F sing 94 n n 
C24 H42 17F sing 95 n n 
C25 H43 17F sing 96 n n 
C25 H44 17F sing 97 n n 
C26 H45 17F sing 98 n n 
C26 H46 17F sing 99 n n 
C27 H47 17F sing 100 n n 
C27 H48 17F sing 101 n n 
C28 H49 17F sing 102 n n 
C28 H50 17F sing 103 n n 
C29 H51 17F sing 104 n n 
C29 H52 17F sing 105 n n 
C30 H53 17F sing 106 n n 
C30 H54 17F sing 107 n n 
C30 H55 17F sing 108 n n 
C31 H56 17F sing 109 n n 
C31 H57 17F sing 110 n n 
C32 H58 17F sing 111 n n 
C32 H59 17F sing 112 n n 
C33 H60 17F sing 113 n n 
C34 H61 17F sing 114 n n 
C35 H62 17F sing 115 n n 
C35 H63 17F sing 116 n n 
C36 H64 17F sing 117 n n 
C36 H65 17F sing 118 n n 
C37 H66 17F sing 119 n n 
C37 H67 17F sing 120 n n 
C38 H68 17F sing 121 n n 
C38 H69 17F sing 122 n n 
C39 H70 17F sing 123 n n 
C39 H71 17F sing 124 n n 
C40 H72 17F sing 125 n n 
C40 H73 17F sing 126 n n 
C41 H74 17F sing 127 n n 
C41 H75 17F sing 128 n n 
C42 H76 17F sing 129 n n 
C42 H77 17F sing 130 n n 
C42 H78 17F sing 131 n n 
#
_atom_sites.entry_id                     6CCX 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 PCW A 1 401 2 PCW DOC . 
E 3 PCW A 1 402 3 PCW DOC . 
F 3 PCW A 1 403 4 PCW DOC . 
G 3 PCW A 1 404 15 PCW DOC . 
H 3 PCW A 1 405 20 PCW DOC . 
I 3 PCW A 1 406 21 PCW DOC . 
J 3 PCW A 1 407 32 PCW DOC . 
K 3 PCW A 1 408 41 PCW DOC . 
L 3 PCW A 1 409 51 PCW DOC . 
M 3 PCW A 1 410 59 PCW DOC . 
N 4 17F A 1 411 79 17F DOS . 
O 3 PCW B 1 201 1 PCW DOC . 
P 3 PCW B 1 202 5 PCW DOC . 
Q 3 PCW B 1 203 6 PCW DOC . 
R 3 PCW B 1 204 7 PCW DOC . 
S 3 PCW B 1 205 9 PCW DOC . 
T 3 PCW B 1 206 10 PCW DOC . 
U 3 PCW B 1 207 11 PCW DOC . 
V 3 PCW B 1 208 12 PCW DOC . 
W 3 PCW B 1 209 13 PCW DOC . 
X 3 PCW B 1 210 14 PCW DOC . 
Y 3 PCW B 1 211 16 PCW DOC . 
Z 3 PCW B 1 212 17 PCW DOC . 
AA 3 PCW B 1 213 18 PCW DOC . 
BA 3 PCW B 1 214 19 PCW DOC . 
CA 3 PCW B 1 215 22 PCW DOC . 
DA 3 PCW B 1 216 23 PCW DOC . 
EA 3 PCW B 1 217 24 PCW DOC . 
FA 3 PCW B 1 218 25 PCW DOC . 
GA 3 PCW B 1 219 26 PCW DOC . 
HA 3 PCW B 1 220 28 PCW DOC . 
IA 3 PCW B 1 221 30 PCW DOC . 
JA 3 PCW B 1 222 31 PCW DOC . 
KA 4 17F B 1 223 33 17F DOS . 
LA 4 17F B 1 224 34 17F DOS . 
MA 4 17F B 1 225 35 17F DOS . 
NA 4 17F B 1 226 36 17F DOS . 
OA 4 17F B 1 227 37 17F DOS . 
PA 4 17F B 1 228 38 17F DOS . 
QA 4 17F B 1 229 39 17F DOS . 
RA 4 17F B 1 230 40 17F DOS . 
SA 3 PCW B 1 231 52 PCW DOC . 
TA 3 PCW B 1 232 63 PCW DOC . 
UA 3 PCW B 1 233 69 PCW DOC . 
VA 4 17F B 1 234 75 17F DOS . 
WA 5 GNP B 1 235 201 GNP GNP . 
XA 6 MG B 1 236 202 MG MG2 . 
YA 7 EWS B 1 237 203 EWS DRG . 
ZA 3 PCW C 1 601 8 PCW DOC . 
AB 3 PCW C 1 602 27 PCW DOC . 
BB 3 PCW C 1 603 29 PCW DOC . 
CB 3 PCW C 1 604 42 PCW DOC . 
DB 3 PCW C 1 605 43 PCW DOC . 
EB 3 PCW C 1 606 44 PCW DOC . 
FB 3 PCW C 1 607 45 PCW DOC . 
GB 3 PCW C 1 608 46 PCW DOC . 
HB 3 PCW C 1 609 47 PCW DOC . 
IB 3 PCW C 1 610 48 PCW DOC . 
JB 3 PCW C 1 611 49 PCW DOC . 
KB 3 PCW C 1 612 50 PCW DOC . 
LB 3 PCW C 1 613 53 PCW DOC . 
MB 3 PCW C 1 614 54 PCW DOC . 
NB 3 PCW C 1 615 55 PCW DOC . 
OB 3 PCW C 1 616 56 PCW DOC . 
PB 3 PCW C 1 617 57 PCW DOC . 
QB 3 PCW C 1 618 58 PCW DOC . 
RB 3 PCW C 1 619 60 PCW DOC . 
SB 3 PCW C 1 620 61 PCW DOC . 
TB 3 PCW C 1 621 62 PCW DOC . 
UB 3 PCW C 1 622 64 PCW DOC . 
VB 3 PCW C 1 623 65 PCW DOC . 
WB 3 PCW C 1 624 66 PCW DOC . 
XB 3 PCW C 1 625 67 PCW DOC . 
YB 3 PCW C 1 626 68 PCW DOC . 
ZB 3 PCW C 1 627 70 PCW DOC . 
AC 3 PCW C 1 628 71 PCW DOC . 
BC 3 PCW C 1 629 72 PCW DOC . 
CC 4 17F C 1 630 73 17F DOS . 
DC 4 17F C 1 631 74 17F DOS . 
EC 4 17F C 1 632 76 17F DOS . 
FC 4 17F C 1 633 77 17F DOS . 
GC 4 17F C 1 634 78 17F DOS . 
HC 4 17F C 1 635 80 17F DOS . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 17F . . . DC 4 4.993 -14.672 -24.593 1 10 0 C1 17F 631 C 1 
HETATM 2 N N1 17F . . . DC 4 4.279 -13.503 -22.484 1 10 0 N1 17F 631 C 1 
HETATM 3 O O1 17F . . . DC 4 8.772 -14.283 -24.546 1 10 0 O1 17F 631 C 1 
HETATM 4 P P1 17F . . . DC 4 7.5 -14.999 -24.153 1 10 0 P1 17F 631 C 1 
HETATM 5 C C2 17F . . . DC 4 3.867 -13.97 -23.8 1 10 0 C2 17F 631 C 1 
HETATM 6 O O2 17F . . . DC 4 7.205 -16.296 -24.866 1 10 0 O2 17F 631 C 1 
HETATM 7 C C3 17F . . . DC 4 2.677 -14.93 -23.653 1 10 0 C3 17F 631 C 1 
HETATM 8 O O3 17F . . . DC 4 6.234 -14.099 -24.319 1 10 0 O3 17F 631 C 1 
HETATM 9 C C4 17F . . . DC 4 6.425 -16.072 -21.996 1 10 0 C4 17F 631 C 1 
HETATM 10 O O4 17F . . . DC 4 2.162 -15.447 -24.64 1 10 0 O4 17F 631 C 1 
HETATM 11 C C5 17F . . . DC 4 6.651 -16.318 -20.48 1 10 0 C5 17F 631 C 1 
HETATM 12 O O5 17F . . . DC 4 2.175 -15.237 -22.508 1 10 0 O5 17F 631 C 1 
HETATM 13 C C6 17F . . . DC 4 7.891 -17.231 -20.262 1 10 0 C6 17F 631 C 1 
HETATM 14 O O6 17F . . . DC 4 7.509 -15.377 -22.61 1 10 0 O6 17F 631 C 1 
HETATM 15 C C7 17F . . . DC 4 8.856 -18.398 -18.44 1 10 0 C7 17F 631 C 1 
HETATM 16 O O7 17F . . . DC 4 8.103 -17.436 -18.878 1 10 0 O7 17F 631 C 1 
HETATM 17 C C8 17F . . . DC 4 8.92 -18.202 -16.912 1 10 0 C8 17F 631 C 1 
HETATM 18 O O8 17F . . . DC 4 9.471 -19.27 -19.009 1 10 0 O8 17F 631 C 1 
HETATM 19 C C9 17F . . . DC 4 9.644 -16.877 -16.561 1 10 0 C9 17F 631 C 1 
HETATM 20 O O9 17F . . . DC 4 6.759 -15.1 -19.738 1 10 0 O9 17F 631 C 1 
HETATM 21 C C10 17F . . . DC 4 9.751 -16.509 -15.043 1 10 0 C10 17F 631 C 1 
HETATM 22 O O10 17F . . . DC 4 4.703 -14.287 -19.082 1 10 0 O10 17F 631 C 1 
HETATM 23 C C11 17F . . . DC 4 9.215 -15.058 -14.754 1 10 0 C11 17F 631 C 1 
HETATM 24 C C12 17F . . . DC 4 9.286 -14.659 -13.241 1 10 0 C12 17F 631 C 1 
HETATM 25 C C17 17F . . . DC 4 5.749 -14.926 -18.91 1 10 0 C17 17F 631 C 1 
HETATM 26 C C18 17F . . . DC 4 5.983 -15.615 -17.583 1 10 0 C18 17F 631 C 1 
HETATM 27 C C19 17F . . . DC 4 4.7 -15.945 -16.785 1 10 0 C19 17F 631 C 1 
HETATM 28 C C20 17F . . . DC 4 4.727 -15.299 -15.354 1 10 0 C20 17F 631 C 1 
HETATM 29 C C1X 17F . . . DC 4 8.737 -13.236 -13.073 1 10 0 C1X 17F 631 C 1 
HETATM 30 C C1Y 17F . . . DC 4 3.435 -15.64 -14.571 1 10 0 C1Y 17F 631 C 1 
HETATM 31 C C1Z 17F . . . DC 4 3.651 -15.456 -13.066 1 10 0 C1Z 17F 631 C 1 
HETATM 32 C C2X 17F . . . DC 4 8.75 -12.751 -11.55 1 10 0 C2X 17F 631 C 1 
HETATM 33 C C21 17F . . . DC 4 7.309 -12.761 -10.956 1 10 0 C21 17F 631 C 1 
HETATM 34 C C22 17F . . . DC 4 6.678 -11.72 -10.522 1 10 0 C22 17F 631 C 1 
HETATM 35 C C23 17F . . . DC 4 7.15 -10.327 -10.48 1 10 0 C23 17F 631 C 1 
HETATM 36 C C24 17F . . . DC 4 7.349 -9.63 -11.828 1 10 0 C24 17F 631 C 1 
HETATM 37 C C25 17F . . . DC 4 7.838 -8.19 -11.758 1 10 0 C25 17F 631 C 1 
HETATM 38 C C26 17F . . . DC 4 7.875 -7.56 -10.284 1 10 0 C26 17F 631 C 1 
HETATM 39 C C27 17F . . . DC 4 8.353 -6.129 -10.179 1 10 0 C27 17F 631 C 1 
HETATM 40 C C28 17F . . . DC 4 8.297 -5.737 -8.651 1 10 0 C28 17F 631 C 1 
HETATM 41 C C29 17F . . . DC 4 6.957 -6.076 -8.127 1 10 0 C29 17F 631 C 1 
HETATM 42 C C30 17F . . . DC 4 6.745 -5.767 -6.677 1 10 0 C30 17F 631 C 1 
HETATM 43 C C31 17F . . . DC 4 4.637 -16.457 -12.372 1 10 0 C31 17F 631 C 1 
HETATM 44 C C32 17F . . . DC 4 4.836 -16.234 -10.849 1 10 0 C32 17F 631 C 1 
HETATM 45 C C33 17F . . . DC 4 4.999 -17.583 -10.159 1 10 0 C33 17F 631 C 1 
HETATM 46 C C34 17F . . . DC 4 5.182 -17.746 -8.853 1 10 0 C34 17F 631 C 1 
HETATM 47 C C35 17F . . . DC 4 5.265 -16.657 -7.81 1 10 0 C35 17F 631 C 1 
HETATM 48 C C36 17F . . . DC 4 6.013 -17.065 -6.507 1 10 0 C36 17F 631 C 1 
HETATM 49 C C37 17F . . . DC 4 5.068 -16.979 -5.367 1 10 0 C37 17F 631 C 1 
HETATM 50 C C38 17F . . . DC 4 5.542 -16.085 -4.197 1 10 0 C38 17F 631 C 1 
HETATM 51 C C39 17F . . . DC 4 4.499 -16.046 -3.069 1 10 0 C39 17F 631 C 1 
HETATM 52 C C40 17F . . . DC 4 4.745 -14.843 -2.149 1 10 0 C40 17F 631 C 1 
HETATM 53 C C41 17F . . . DC 4 3.395 -14.076 -1.846 1 10 0 C41 17F 631 C 1 
HETATM 54 C C42 17F . . . DC 4 3.178 -12.676 -2.437 1 10 0 C42 17F 631 C 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    114 
_model_server_stats.query_time_ms           3249 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           54 
#