data_6CD6
#
_model_server_result.job_id            eCK2phGKIMPwG48rs0qpBA 
_model_server_result.datetime_utc      '2024-10-19 17:46:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6cd6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":501}' 
#
_entry.id    6CD6 
#
_exptl.entry_id    6CD6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              382.454 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-cyclopentyl-4-(5-phenyl-1H-pyrrolo[2,3-b]pyridin-3-yl)benzoic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.03 
_cell.angle_gamma         90 
_cell.entry_id            6CD6 
_cell.length_a            44.378 
_cell.length_b            96.042 
_cell.length_c            141.26 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CD6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,M 1 1 
B,G,H,N 2 1 
C,I,J,O 3 1 
D,K,L,P 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C25 H22 N2 O2' 
_chem_comp.formula_weight    382.454 
_chem_comp.id                DXV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-cyclopentyl-4-(5-phenyl-1H-pyrrolo[2,3-b]pyridin-3-yl)benzoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C16 DXV sing 83 n y 
N1 C15 DXV sing 84 n y 
N2 C16 DXV doub 85 n y 
N2 C19 DXV sing 86 n y 
C16 C14 DXV sing 87 n y 
C15 C11 DXV doub 88 n y 
C19 C18 DXV doub 89 n y 
C11 C14 DXV sing 90 n y 
C11 C9 DXV sing 91 n n 
C14 C17 DXV doub 92 n y 
C18 C17 DXV sing 93 n y 
C18 C20 DXV sing 94 n n 
C9 C12 DXV doub 95 n y 
C9 C7 DXV sing 96 n y 
C12 C10 DXV sing 97 n y 
C22 C20 DXV doub 98 n y 
C22 C24 DXV sing 99 n y 
C20 C21 DXV sing 100 n y 
C7 C6 DXV doub 101 n y 
C24 C25 DXV doub 102 n y 
C10 C8 DXV doub 103 n y 
C21 C23 DXV doub 104 n y 
C2 C5 DXV sing 105 n n 
C2 C1 DXV sing 106 n n 
C6 C8 DXV sing 107 n y 
C6 C1 DXV sing 108 n n 
C25 C23 DXV sing 109 n y 
C8 C13 DXV sing 110 n n 
C5 C4 DXV sing 111 n n 
C1 C3 DXV sing 112 n n 
O1 C13 DXV doub 113 n n 
C13 O2 DXV sing 114 n n 
C4 C3 DXV sing 115 n n 
C4 H1 DXV sing 116 n n 
C4 H2 DXV sing 117 n n 
C5 H3 DXV sing 118 n n 
C5 H4 DXV sing 119 n n 
C7 H5 DXV sing 120 n n 
C10 H6 DXV sing 121 n n 
C12 H7 DXV sing 122 n n 
N1 H8 DXV sing 123 n n 
C3 H9 DXV sing 124 n n 
C3 H10 DXV sing 125 n n 
O2 H11 DXV sing 126 n n 
C1 H12 DXV sing 127 n n 
C2 H13 DXV sing 128 n n 
C2 H14 DXV sing 129 n n 
C15 H15 DXV sing 130 n n 
C17 H16 DXV sing 131 n n 
C19 H17 DXV sing 132 n n 
C21 H18 DXV sing 133 n n 
C22 H19 DXV sing 134 n n 
C23 H20 DXV sing 135 n n 
C24 H21 DXV sing 136 n n 
C25 H22 DXV sing 137 n n 
#
_atom_sites.entry_id                     6CD6 
_atom_sites.fract_transf_matrix[1][1]    0.022534 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000011 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010412 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007079 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 DXV A 1 501 600 DXV DRG . 
F 3 CL A 1 502 1 CL CL . 
G 2 DXV B 1 501 600 DXV DRG . 
H 3 CL B 1 502 2 CL CL . 
I 2 DXV C 1 501 600 DXV DRG . 
J 3 CL C 1 502 3 CL CL . 
K 2 DXV D 1 501 600 DXV DRG . 
L 3 CL D 1 502 4 CL CL . 
M 4 HOH A 1 601 166 HOH HOH . 
M 4 HOH A 2 602 68 HOH HOH . 
M 4 HOH A 3 603 60 HOH HOH . 
M 4 HOH A 4 604 112 HOH HOH . 
M 4 HOH A 5 605 150 HOH HOH . 
M 4 HOH A 6 606 130 HOH HOH . 
M 4 HOH A 7 607 72 HOH HOH . 
M 4 HOH A 8 608 132 HOH HOH . 
M 4 HOH A 9 609 52 HOH HOH . 
M 4 HOH A 10 610 145 HOH HOH . 
M 4 HOH A 11 611 39 HOH HOH . 
M 4 HOH A 12 612 1 HOH HOH . 
M 4 HOH A 13 613 104 HOH HOH . 
M 4 HOH A 14 614 157 HOH HOH . 
M 4 HOH A 15 615 10 HOH HOH . 
M 4 HOH A 16 616 160 HOH HOH . 
M 4 HOH A 17 617 28 HOH HOH . 
M 4 HOH A 18 618 111 HOH HOH . 
M 4 HOH A 19 619 42 HOH HOH . 
M 4 HOH A 20 620 126 HOH HOH . 
M 4 HOH A 21 621 88 HOH HOH . 
M 4 HOH A 22 622 122 HOH HOH . 
M 4 HOH A 23 623 61 HOH HOH . 
M 4 HOH A 24 624 90 HOH HOH . 
M 4 HOH A 25 625 116 HOH HOH . 
M 4 HOH A 26 626 45 HOH HOH . 
M 4 HOH A 27 627 47 HOH HOH . 
M 4 HOH A 28 628 66 HOH HOH . 
M 4 HOH A 29 629 120 HOH HOH . 
M 4 HOH A 30 630 20 HOH HOH . 
M 4 HOH A 31 631 63 HOH HOH . 
M 4 HOH A 32 632 32 HOH HOH . 
M 4 HOH A 33 633 164 HOH HOH . 
M 4 HOH A 34 634 167 HOH HOH . 
M 4 HOH A 35 635 154 HOH HOH . 
N 4 HOH B 1 601 59 HOH HOH . 
N 4 HOH B 2 602 140 HOH HOH . 
N 4 HOH B 3 603 86 HOH HOH . 
N 4 HOH B 4 604 79 HOH HOH . 
N 4 HOH B 5 605 141 HOH HOH . 
N 4 HOH B 6 606 148 HOH HOH . 
N 4 HOH B 7 607 13 HOH HOH . 
N 4 HOH B 8 608 11 HOH HOH . 
N 4 HOH B 9 609 125 HOH HOH . 
N 4 HOH B 10 610 14 HOH HOH . 
N 4 HOH B 11 611 146 HOH HOH . 
N 4 HOH B 12 612 35 HOH HOH . 
N 4 HOH B 13 613 51 HOH HOH . 
N 4 HOH B 14 614 58 HOH HOH . 
N 4 HOH B 15 615 31 HOH HOH . 
N 4 HOH B 16 616 16 HOH HOH . 
N 4 HOH B 17 617 64 HOH HOH . 
N 4 HOH B 18 618 103 HOH HOH . 
N 4 HOH B 19 619 75 HOH HOH . 
N 4 HOH B 20 620 144 HOH HOH . 
N 4 HOH B 21 621 105 HOH HOH . 
N 4 HOH B 22 622 119 HOH HOH . 
O 4 HOH C 1 601 163 HOH HOH . 
O 4 HOH C 2 602 82 HOH HOH . 
O 4 HOH C 3 603 108 HOH HOH . 
O 4 HOH C 4 604 2 HOH HOH . 
O 4 HOH C 5 605 19 HOH HOH . 
O 4 HOH C 6 606 129 HOH HOH . 
O 4 HOH C 7 607 114 HOH HOH . 
O 4 HOH C 8 608 151 HOH HOH . 
O 4 HOH C 9 609 156 HOH HOH . 
O 4 HOH C 10 610 62 HOH HOH . 
O 4 HOH C 11 611 69 HOH HOH . 
O 4 HOH C 12 612 113 HOH HOH . 
O 4 HOH C 13 613 127 HOH HOH . 
O 4 HOH C 14 614 78 HOH HOH . 
O 4 HOH C 15 615 152 HOH HOH . 
O 4 HOH C 16 616 71 HOH HOH . 
O 4 HOH C 17 617 165 HOH HOH . 
O 4 HOH C 18 618 56 HOH HOH . 
O 4 HOH C 19 619 118 HOH HOH . 
O 4 HOH C 20 620 137 HOH HOH . 
O 4 HOH C 21 621 123 HOH HOH . 
O 4 HOH C 22 622 38 HOH HOH . 
O 4 HOH C 23 623 134 HOH HOH . 
O 4 HOH C 24 624 15 HOH HOH . 
O 4 HOH C 25 625 49 HOH HOH . 
O 4 HOH C 26 626 139 HOH HOH . 
O 4 HOH C 27 627 36 HOH HOH . 
O 4 HOH C 28 628 87 HOH HOH . 
O 4 HOH C 29 629 149 HOH HOH . 
O 4 HOH C 30 630 161 HOH HOH . 
P 4 HOH D 1 601 153 HOH HOH . 
P 4 HOH D 2 602 55 HOH HOH . 
P 4 HOH D 3 603 80 HOH HOH . 
P 4 HOH D 4 604 135 HOH HOH . 
P 4 HOH D 5 605 5 HOH HOH . 
P 4 HOH D 6 606 158 HOH HOH . 
P 4 HOH D 7 607 136 HOH HOH . 
P 4 HOH D 8 608 25 HOH HOH . 
P 4 HOH D 9 609 22 HOH HOH . 
P 4 HOH D 10 610 143 HOH HOH . 
P 4 HOH D 11 611 24 HOH HOH . 
P 4 HOH D 12 612 147 HOH HOH . 
P 4 HOH D 13 613 34 HOH HOH . 
P 4 HOH D 14 614 128 HOH HOH . 
P 4 HOH D 15 615 94 HOH HOH . 
P 4 HOH D 16 616 73 HOH HOH . 
P 4 HOH D 17 617 107 HOH HOH . 
P 4 HOH D 18 618 96 HOH HOH . 
P 4 HOH D 19 619 133 HOH HOH . 
P 4 HOH D 20 620 74 HOH HOH . 
P 4 HOH D 21 621 142 HOH HOH . 
P 4 HOH D 22 622 131 HOH HOH . 
P 4 HOH D 23 623 121 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 DXV . . . G 2 -24.909 0.417 -82.975 1 46.3 ? C4 DXV 501 B 1 
HETATM 2 C C14 DXV . . . G 2 -29.189 -0.029 -80.261 1 47.31 ? C14 DXV 501 B 1 
HETATM 3 C C5 DXV . . . G 2 -24.94 -1.058 -82.907 1 47.29 ? C5 DXV 501 B 1 
HETATM 4 C C6 DXV . . . G 2 -27.722 0.002 -84.487 1 46.64 ? C6 DXV 501 B 1 
HETATM 5 C C11 DXV . . . G 2 -29.976 -0.203 -81.465 1 49.22 ? C11 DXV 501 B 1 
HETATM 6 C C7 DXV . . . G 2 -28.194 -0.217 -83.195 1 47.13 ? C7 DXV 501 B 1 
HETATM 7 C C8 DXV . . . G 2 -28.616 0.461 -85.475 1 46.77 ? C8 DXV 501 B 1 
HETATM 8 C C9 DXV . . . G 2 -29.525 0.002 -82.855 1 45.49 ? C9 DXV 501 B 1 
HETATM 9 C C10 DXV . . . G 2 -29.957 0.688 -85.128 1 45.93 ? C10 DXV 501 B 1 
HETATM 10 C C12 DXV . . . G 2 -30.396 0.469 -83.833 1 45.71 ? C12 DXV 501 B 1 
HETATM 11 C C13 DXV . . . G 2 -28.194 0.724 -86.892 1 49.15 ? C13 DXV 501 B 1 
HETATM 12 N N1 DXV . . . G 2 -31.274 -0.636 -79.663 1 47.66 ? N1 DXV 501 B 1 
HETATM 13 N N2 DXV . . . G 2 -29.708 -0.284 -77.875 1 48.37 ? N2 DXV 501 B 1 
HETATM 14 C C3 DXV . . . G 2 -25.267 0.762 -84.408 1 45.75 ? C3 DXV 501 B 1 
HETATM 15 O O1 DXV . . . G 2 -27.186 1.452 -87.093 1 48.04 -1 O1 DXV 501 B 1 
HETATM 16 O O2 DXV . . . G 2 -28.885 0.224 -87.79 1 55.73 ? O2 DXV 501 B 1 
HETATM 17 C C1 DXV . . . G 2 -26.271 -0.297 -84.801 1 46.24 ? C1 DXV 501 B 1 
HETATM 18 C C2 DXV . . . G 2 -25.68 -1.548 -84.15 1 45.94 ? C2 DXV 501 B 1 
HETATM 19 C C15 DXV . . . G 2 -31.227 -0.565 -81.038 1 50.51 ? C15 DXV 501 B 1 
HETATM 20 C C16 DXV . . . G 2 -30.047 -0.321 -79.171 1 47.41 ? C16 DXV 501 B 1 
HETATM 21 C C17 DXV . . . G 2 -27.878 0.321 -79.948 1 49.16 ? C17 DXV 501 B 1 
HETATM 22 C C18 DXV . . . G 2 -27.485 0.373 -78.606 1 48.57 ? C18 DXV 501 B 1 
HETATM 23 C C19 DXV . . . G 2 -28.453 0.058 -77.607 1 47.69 ? C19 DXV 501 B 1 
HETATM 24 C C20 DXV . . . G 2 -26.083 0.742 -78.232 1 44.61 ? C20 DXV 501 B 1 
HETATM 25 C C21 DXV . . . G 2 -25.048 0.74 -79.17 1 42.9 ? C21 DXV 501 B 1 
HETATM 26 C C22 DXV . . . G 2 -25.745 1.093 -76.921 1 44.61 ? C22 DXV 501 B 1 
HETATM 27 C C23 DXV . . . G 2 -23.745 1.065 -78.818 1 42.07 ? C23 DXV 501 B 1 
HETATM 28 C C24 DXV . . . G 2 -24.438 1.416 -76.574 1 45.02 ? C24 DXV 501 B 1 
HETATM 29 C C25 DXV . . . G 2 -23.437 1.392 -77.518 1 41.98 ? C25 DXV 501 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    44 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           29 
#