data_6CDY # _model_server_result.job_id glucCRM35dMucbicGGfldA _model_server_result.datetime_utc '2024-10-20 20:37:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cdy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6CDY # _exptl.entry_id 6CDY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 368.496 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[(4H-1,2,4-triazol-3-yl)sulfanyl]-N-{4-[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]decan-1-yl]phenyl}acetamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.4 _cell.angle_gamma 90 _cell.entry_id 6CDY _cell.length_a 122.464 _cell.length_b 61.64 _cell.length_c 80.421 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CDY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C20 H24 N4 O S' _chem_comp.formula_weight 368.496 _chem_comp.id EY1 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[(4H-1,2,4-triazol-3-yl)sulfanyl]-N-{4-[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]decan-1-yl]phenyl}acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C21 EY1 sing 83 n n C20 C19 EY1 sing 84 n n C21 C22 EY1 sing 85 n n C21 C23 EY1 sing 86 n n C22 C17 EY1 sing 87 n n C19 C18 EY1 sing 88 n n C19 C24 EY1 sing 89 n n C18 C17 EY1 sing 90 n n C23 C15 EY1 sing 91 n n C17 C16 EY1 sing 92 n n C24 C15 EY1 sing 93 n n C15 C16 EY1 sing 94 n n C15 C14 EY1 sing 95 n n C14 C25 EY1 doub 96 n y C14 C13 EY1 sing 97 n y C25 C26 EY1 sing 98 n y C13 C12 EY1 doub 99 n y C26 C11 EY1 doub 100 n y C12 C11 EY1 sing 101 n y C11 N10 EY1 sing 102 n n C08 N07 EY1 doub 103 n y C08 N09 EY1 sing 104 n y N07 N06 EY1 sing 105 n y N09 C05 EY1 sing 106 n y N06 C05 EY1 doub 107 n y N10 C02 EY1 sing 108 n n O01 C02 EY1 doub 109 n n C05 S04 EY1 sing 110 n n C02 C03 EY1 sing 111 n n S04 C03 EY1 sing 112 n n C13 H131 EY1 sing 113 n n C17 H171 EY1 sing 114 n n C20 H202 EY1 sing 115 n n C20 H201 EY1 sing 116 n n C21 H211 EY1 sing 117 n n C22 H221 EY1 sing 118 n n C22 H222 EY1 sing 119 n n C24 H242 EY1 sing 120 n n C24 H241 EY1 sing 121 n n C26 H261 EY1 sing 122 n n C03 H032 EY1 sing 123 n n C03 H031 EY1 sing 124 n n C08 H081 EY1 sing 125 n n N09 H091 EY1 sing 126 n n N10 H101 EY1 sing 127 n n C12 H121 EY1 sing 128 n n C16 H162 EY1 sing 129 n n C16 H161 EY1 sing 130 n n C18 H181 EY1 sing 131 n n C18 H182 EY1 sing 132 n n C19 H191 EY1 sing 133 n n C23 H231 EY1 sing 134 n n C23 H232 EY1 sing 135 n n C25 H251 EY1 sing 136 n n # _atom_sites.entry_id 6CDY _atom_sites.fract_transf_matrix[1][1] 0.008166 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004233 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016223 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014006 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EY1 A 1 501 2 EY1 LIG . D 2 EY1 B 1 501 1 EY1 LIG . E 3 HOH A 1 601 22 HOH HOH . E 3 HOH A 2 602 61 HOH HOH . E 3 HOH A 3 603 10 HOH HOH . E 3 HOH A 4 604 33 HOH HOH . E 3 HOH A 5 605 37 HOH HOH . E 3 HOH A 6 606 76 HOH HOH . E 3 HOH A 7 607 25 HOH HOH . E 3 HOH A 8 608 50 HOH HOH . E 3 HOH A 9 609 73 HOH HOH . E 3 HOH A 10 610 57 HOH HOH . E 3 HOH A 11 611 11 HOH HOH . E 3 HOH A 12 612 36 HOH HOH . E 3 HOH A 13 613 63 HOH HOH . E 3 HOH A 14 614 48 HOH HOH . E 3 HOH A 15 615 39 HOH HOH . E 3 HOH A 16 616 49 HOH HOH . E 3 HOH A 17 617 13 HOH HOH . E 3 HOH A 18 618 56 HOH HOH . E 3 HOH A 19 619 27 HOH HOH . E 3 HOH A 20 620 67 HOH HOH . E 3 HOH A 21 621 44 HOH HOH . E 3 HOH A 22 622 78 HOH HOH . E 3 HOH A 23 623 23 HOH HOH . E 3 HOH A 24 624 16 HOH HOH . E 3 HOH A 25 625 69 HOH HOH . E 3 HOH A 26 626 74 HOH HOH . E 3 HOH A 27 627 85 HOH HOH . F 3 HOH B 1 601 70 HOH HOH . F 3 HOH B 2 602 21 HOH HOH . F 3 HOH B 3 603 42 HOH HOH . F 3 HOH B 4 604 35 HOH HOH . F 3 HOH B 5 605 29 HOH HOH . F 3 HOH B 6 606 51 HOH HOH . F 3 HOH B 7 607 4 HOH HOH . F 3 HOH B 8 608 89 HOH HOH . F 3 HOH B 9 609 8 HOH HOH . F 3 HOH B 10 610 19 HOH HOH . F 3 HOH B 11 611 80 HOH HOH . F 3 HOH B 12 612 1 HOH HOH . F 3 HOH B 13 613 20 HOH HOH . F 3 HOH B 14 614 5 HOH HOH . F 3 HOH B 15 615 3 HOH HOH . F 3 HOH B 16 616 82 HOH HOH . F 3 HOH B 17 617 6 HOH HOH . F 3 HOH B 18 618 15 HOH HOH . F 3 HOH B 19 619 46 HOH HOH . F 3 HOH B 20 620 40 HOH HOH . F 3 HOH B 21 621 32 HOH HOH . F 3 HOH B 22 622 41 HOH HOH . F 3 HOH B 23 623 18 HOH HOH . F 3 HOH B 24 624 12 HOH HOH . F 3 HOH B 25 625 66 HOH HOH . F 3 HOH B 26 626 53 HOH HOH . F 3 HOH B 27 627 34 HOH HOH . F 3 HOH B 28 628 24 HOH HOH . F 3 HOH B 29 629 2 HOH HOH . F 3 HOH B 30 630 26 HOH HOH . F 3 HOH B 31 631 47 HOH HOH . F 3 HOH B 32 632 83 HOH HOH . F 3 HOH B 33 633 43 HOH HOH . F 3 HOH B 34 634 58 HOH HOH . F 3 HOH B 35 635 17 HOH HOH . F 3 HOH B 36 636 88 HOH HOH . F 3 HOH B 37 637 30 HOH HOH . F 3 HOH B 38 638 59 HOH HOH . F 3 HOH B 39 639 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 EY1 . . . C 2 -33.028 17.624 18.682 1 64.41 ? C13 EY1 501 A 1 HETATM 2 C C15 EY1 . . . C 2 -31.062 17.711 17.155 1 44.99 ? C15 EY1 501 A 1 HETATM 3 C C17 EY1 . . . C 2 -30.091 19.813 16.134 1 44.93 ? C17 EY1 501 A 1 HETATM 4 C C20 EY1 . . . C 2 -29.362 17.447 14.724 1 72.46 ? C20 EY1 501 A 1 HETATM 5 C C21 EY1 . . . C 2 -30.678 17.901 14.611 1 58.86 ? C21 EY1 501 A 1 HETATM 6 C C22 EY1 . . . C 2 -30.787 19.435 14.884 1 46.69 ? C22 EY1 501 A 1 HETATM 7 C C24 EY1 . . . C 2 -29.516 17.05 17.025 1 74.97 ? C24 EY1 501 A 1 HETATM 8 C C26 EY1 . . . C 2 -32.206 15.293 19.764 1 62.59 ? C26 EY1 501 A 1 HETATM 9 O O01 EY1 . . . C 2 -36.111 15.327 20.456 1 110.13 ? O01 EY1 501 A 1 HETATM 10 C C02 EY1 . . . C 2 -35.365 14.884 21.241 1 99.01 ? C02 EY1 501 A 1 HETATM 11 C C03 EY1 . . . C 2 -35.835 14.039 22.388 1 114.89 ? C03 EY1 501 A 1 HETATM 12 S S04 EY1 . . . C 2 -34.304 13.182 22.857 1 162.75 ? S04 EY1 501 A 1 HETATM 13 C C05 EY1 . . . C 2 -33.561 11.891 21.871 1 113.85 ? C05 EY1 501 A 1 HETATM 14 N N06 EY1 . . . C 2 -34.152 10.97 21.175 1 117.64 ? N06 EY1 501 A 1 HETATM 15 N N07 EY1 . . . C 2 -33.183 10.227 20.597 1 113.37 ? N07 EY1 501 A 1 HETATM 16 C C08 EY1 . . . C 2 -32.039 10.731 20.967 1 98.57 ? C08 EY1 501 A 1 HETATM 17 N N09 EY1 . . . C 2 -32.275 11.747 21.741 1 96.19 ? N09 EY1 501 A 1 HETATM 18 N N10 EY1 . . . C 2 -33.947 15.093 21.207 1 68.18 ? N10 EY1 501 A 1 HETATM 19 C C11 EY1 . . . C 2 -33.352 15.873 20.193 1 39.21 ? C11 EY1 501 A 1 HETATM 20 C C12 EY1 . . . C 2 -33.777 17.05 19.657 1 54.1 ? C12 EY1 501 A 1 HETATM 21 C C14 EY1 . . . C 2 -31.879 17.048 18.249 1 44.55 ? C14 EY1 501 A 1 HETATM 22 C C16 EY1 . . . C 2 -31.011 19.227 17.201 1 48.47 ? C16 EY1 501 A 1 HETATM 23 C C18 EY1 . . . C 2 -28.75 19.294 16.194 1 55.85 ? C18 EY1 501 A 1 HETATM 24 C C19 EY1 . . . C 2 -28.676 17.832 15.914 1 75.22 ? C19 EY1 501 A 1 HETATM 25 C C23 EY1 . . . C 2 -31.452 17.248 15.635 1 57.81 ? C23 EY1 501 A 1 HETATM 26 C C25 EY1 . . . C 2 -31.473 15.863 18.806 1 59.81 ? C25 EY1 501 A 1 HETATM 27 H H131 EY1 . . . C 2 -33.306 18.427 18.305 1 77.29 ? H131 EY1 501 A 1 HETATM 28 H H171 EY1 . . . C 2 -30.071 20.779 16.221 1 53.91 ? H171 EY1 501 A 1 HETATM 29 H H202 EY1 . . . C 2 -28.869 17.827 13.98 1 86.95 ? H202 EY1 501 A 1 HETATM 30 H H201 EY1 . . . C 2 -29.332 16.482 14.629 1 86.95 ? H201 EY1 501 A 1 HETATM 31 H H211 EY1 . . . C 2 -31.032 17.694 13.732 1 70.63 ? H211 EY1 501 A 1 HETATM 32 H H221 EY1 . . . C 2 -31.72 19.701 14.891 1 56.03 ? H221 EY1 501 A 1 HETATM 33 H H222 EY1 . . . C 2 -30.348 19.887 14.146 1 56.03 ? H222 EY1 501 A 1 HETATM 34 H H242 EY1 . . . C 2 -29.069 17.14 17.881 1 89.97 ? H242 EY1 501 A 1 HETATM 35 H H241 EY1 . . . C 2 -29.579 16.111 16.791 1 89.97 ? H241 EY1 501 A 1 HETATM 36 H H261 EY1 . . . C 2 -31.922 14.49 20.138 1 75.1 ? H261 EY1 501 A 1 HETATM 37 H H032 EY1 . . . C 2 -36.507 13.409 22.082 1 137.86 ? H032 EY1 501 A 1 HETATM 38 H H031 EY1 . . . C 2 -36.172 14.59 23.112 1 137.86 ? H031 EY1 501 A 1 HETATM 39 H H081 EY1 . . . C 2 -31.201 10.416 20.716 1 118.28 ? H081 EY1 501 A 1 HETATM 40 H H091 EY1 . . . C 2 -31.678 12.243 22.111 1 115.42 ? H091 EY1 501 A 1 HETATM 41 H H101 EY1 . . . C 2 -33.47 14.734 21.826 1 81.82 ? H101 EY1 501 A 1 HETATM 42 H H121 EY1 . . . C 2 -34.563 17.451 19.949 1 64.92 ? H121 EY1 501 A 1 HETATM 43 H H162 EY1 . . . C 2 -31.911 19.566 17.072 1 58.17 ? H162 EY1 501 A 1 HETATM 44 H H161 EY1 . . . C 2 -30.699 19.496 18.079 1 58.17 ? H161 EY1 501 A 1 HETATM 45 H H181 EY1 . . . C 2 -28.212 19.76 15.535 1 67.02 ? H181 EY1 501 A 1 HETATM 46 H H182 EY1 . . . C 2 -28.376 19.467 17.072 1 67.02 ? H182 EY1 501 A 1 HETATM 47 H H191 EY1 . . . C 2 -27.754 17.529 15.894 1 90.27 ? H191 EY1 501 A 1 HETATM 48 H H231 EY1 . . . C 2 -31.369 16.284 15.567 1 69.38 ? H231 EY1 501 A 1 HETATM 49 H H232 EY1 . . . C 2 -32.384 17.475 15.489 1 69.38 ? H232 EY1 501 A 1 HETATM 50 H H251 EY1 . . . C 2 -30.693 15.434 18.537 1 71.77 ? H251 EY1 501 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 50 #