data_6CED # _model_server_result.job_id d2niCvo26FBtnZvW17LVUA _model_server_result.datetime_utc '2024-11-08 16:51:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ced # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1304}' # _entry.id 6CED # _exptl.entry_id 6CED _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 232.235 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(3-methyl-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CED _cell.length_a 40.72 _cell.length_b 44.43 _cell.length_c 55.71 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CED _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 7 A CYS 1113 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc2 A ND1 HIS 9 A HIS 1115 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc3 A SG CYS 27 A CYS 1133 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc4 A SG CYS 30 A CYS 1136 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc5 A SG CYS 39 A CYS 1145 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc6 A SG CYS 42 A CYS 1148 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc7 A SG CYS 47 A CYS 1153 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc8 A ND1 HIS 54 A HIS 1160 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc9 A NE2 HIS 58 A HIS 1164 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc10 A ND1 HIS 64 A HIS 1170 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc11 A SG CYS 77 A CYS 1183 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc12 A SG CYS 80 A CYS 1186 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? # _chem_comp.formula 'C12 H12 N2 O3' _chem_comp.formula_weight 232.235 _chem_comp.id EYA _chem_comp.mon_nstd_flag . _chem_comp.name '3-(3-methyl-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C8 EYA doub 83 n y C7 C6 EYA sing 84 n y C8 C9 EYA sing 85 n y C6 C5 EYA doub 86 n y C9 C10 EYA doub 87 n y C5 C10 EYA sing 88 n y C5 N1 EYA sing 89 n n C10 C11 EYA sing 90 n n N1 C1 EYA doub 91 n n C11 O2 EYA doub 92 n n C11 N EYA sing 93 n n O1 C4 EYA doub 94 n n C1 N EYA sing 95 n n C1 C2 EYA sing 96 n n N C EYA sing 97 n n C3 C4 EYA sing 98 n n C3 C2 EYA sing 99 n n C4 O EYA sing 100 n n C2 H1 EYA sing 101 n n C2 H2 EYA sing 102 n n C3 H3 EYA sing 103 n n C3 H4 EYA sing 104 n n C6 H5 EYA sing 105 n n C7 H6 EYA sing 106 n n C8 H7 EYA sing 107 n n C H8 EYA sing 108 n n C H9 EYA sing 109 n n C H10 EYA sing 110 n n O H11 EYA sing 111 n n C9 H12 EYA sing 112 n n # _atom_sites.entry_id 6CED _atom_sites.fract_transf_matrix[1][1] 0.024558 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01795 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1301 1301 ZN ZN . C 2 ZN A 1 1302 1302 ZN ZN . D 2 ZN A 1 1303 1303 ZN ZN . E 3 EYA A 1 1304 1 EYA 108 . F 4 UNX A 1 1305 1 UNX UNX . G 5 HOH A 1 1401 16 HOH HOH . G 5 HOH A 2 1402 1415 HOH HOH . G 5 HOH A 3 1403 57 HOH HOH . G 5 HOH A 4 1404 1412 HOH HOH . G 5 HOH A 5 1405 1421 HOH HOH . G 5 HOH A 6 1406 1417 HOH HOH . G 5 HOH A 7 1407 1409 HOH HOH . G 5 HOH A 8 1408 1410 HOH HOH . G 5 HOH A 9 1409 1418 HOH HOH . G 5 HOH A 10 1410 1425 HOH HOH . G 5 HOH A 11 1411 3 HOH HOH . G 5 HOH A 12 1412 1430 HOH HOH . G 5 HOH A 13 1413 46 HOH HOH . G 5 HOH A 14 1414 1432 HOH HOH . G 5 HOH A 15 1415 23 HOH HOH . G 5 HOH A 16 1416 51 HOH HOH . G 5 HOH A 17 1417 58 HOH HOH . G 5 HOH A 18 1418 4 HOH HOH . G 5 HOH A 19 1419 1459 HOH HOH . G 5 HOH A 20 1420 1413 HOH HOH . G 5 HOH A 21 1421 53 HOH HOH . G 5 HOH A 22 1422 1435 HOH HOH . G 5 HOH A 23 1423 1420 HOH HOH . G 5 HOH A 24 1424 1419 HOH HOH . G 5 HOH A 25 1425 1443 HOH HOH . G 5 HOH A 26 1426 41 HOH HOH . G 5 HOH A 27 1427 1407 HOH HOH . G 5 HOH A 28 1428 1439 HOH HOH . G 5 HOH A 29 1429 1451 HOH HOH . G 5 HOH A 30 1430 1428 HOH HOH . G 5 HOH A 31 1431 17 HOH HOH . G 5 HOH A 32 1432 24 HOH HOH . G 5 HOH A 33 1433 1416 HOH HOH . G 5 HOH A 34 1434 1411 HOH HOH . G 5 HOH A 35 1435 1447 HOH HOH . G 5 HOH A 36 1436 1446 HOH HOH . G 5 HOH A 37 1437 1444 HOH HOH . G 5 HOH A 38 1438 1424 HOH HOH . G 5 HOH A 39 1439 50 HOH HOH . G 5 HOH A 40 1440 49 HOH HOH . G 5 HOH A 41 1441 1427 HOH HOH . G 5 HOH A 42 1442 1461 HOH HOH . G 5 HOH A 43 1443 1406 HOH HOH . G 5 HOH A 44 1444 15 HOH HOH . G 5 HOH A 45 1445 59 HOH HOH . G 5 HOH A 46 1446 1437 HOH HOH . G 5 HOH A 47 1447 1455 HOH HOH . G 5 HOH A 48 1448 1429 HOH HOH . G 5 HOH A 49 1449 26 HOH HOH . G 5 HOH A 50 1450 25 HOH HOH . G 5 HOH A 51 1451 1460 HOH HOH . G 5 HOH A 52 1452 2 HOH HOH . G 5 HOH A 53 1453 52 HOH HOH . G 5 HOH A 54 1454 1440 HOH HOH . G 5 HOH A 55 1455 1462 HOH HOH . G 5 HOH A 56 1456 1463 HOH HOH . G 5 HOH A 57 1457 1458 HOH HOH . G 5 HOH A 58 1458 56 HOH HOH . G 5 HOH A 59 1459 1468 HOH HOH . G 5 HOH A 60 1460 1441 HOH HOH . G 5 HOH A 61 1461 1469 HOH HOH . G 5 HOH A 62 1462 22 HOH HOH . G 5 HOH A 63 1463 1 HOH HOH . G 5 HOH A 64 1464 1470 HOH HOH . G 5 HOH A 65 1465 1476 HOH HOH . G 5 HOH A 66 1466 1473 HOH HOH . G 5 HOH A 67 1467 54 HOH HOH . G 5 HOH A 68 1468 1478 HOH HOH . G 5 HOH A 69 1469 1475 HOH HOH . G 5 HOH A 70 1470 55 HOH HOH . G 5 HOH A 71 1471 1480 HOH HOH . G 5 HOH A 72 1472 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EYA . . . E 3 0.444 2.514 7.52 1 19.04 ? C1 EYA 1304 A 1 HETATM 2 C C2 EYA . . . E 3 1.393 1.686 8.32 1 15.6 ? C2 EYA 1304 A 1 HETATM 3 C C3 EYA . . . E 3 2.853 1.966 7.98 1 15.06 ? C3 EYA 1304 A 1 HETATM 4 C C4 EYA . . . E 3 3.376 3.367 8.23 1 15.9 ? C4 EYA 1304 A 1 HETATM 5 C C5 EYA . . . E 3 0.06 4.113 5.906 1 25.2 ? C5 EYA 1304 A 1 HETATM 6 C C6 EYA . . . E 3 0.591 4.975 4.944 1 26.55 ? C6 EYA 1304 A 1 HETATM 7 C C7 EYA . . . E 3 -0.255 5.771 4.189 1 31.28 ? C7 EYA 1304 A 1 HETATM 8 C C8 EYA . . . E 3 -1.62 5.714 4.381 1 27.78 ? C8 EYA 1304 A 1 HETATM 9 O O1 EYA . . . E 3 4.255 3.845 7.508 1 15.59 ? O1 EYA 1304 A 1 HETATM 10 N N1 EYA . . . E 3 0.937 3.33 6.656 1 20.41 ? N1 EYA 1304 A 1 HETATM 11 N N EYA . . . E 3 -0.922 2.379 7.762 1 20.68 ? N EYA 1304 A 1 HETATM 12 C C EYA . . . E 3 -1.411 1.419 8.737 1 19.86 ? C EYA 1304 A 1 HETATM 13 O O EYA . . . E 3 2.862 3.956 9.31 1 17.73 ? O EYA 1304 A 1 HETATM 14 O O2 EYA . . . E 3 -3.034 3.093 7.341 1 25.92 ? O2 EYA 1304 A 1 HETATM 15 C C11 EYA . . . E 3 -1.857 3.163 7.077 1 23.31 ? C11 EYA 1304 A 1 HETATM 16 C C10 EYA . . . E 3 -1.321 4.062 6.097 1 22.45 ? C10 EYA 1304 A 1 HETATM 17 C C9 EYA . . . E 3 -2.163 4.873 5.331 1 27.05 ? C9 EYA 1304 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #