data_6CEF # _model_server_result.job_id 2luc1AmFKUew65qgvhaORg _model_server_result.datetime_utc '2024-11-23 00:27:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cef # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1303}' # _entry.id 6CEF # _exptl.entry_id 6CEF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CEF _cell.length_a 40.7 _cell.length_b 44.21 _cell.length_c 56.03 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CEF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 7 A CYS 1113 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc2 A ND1 HIS 9 A HIS 1115 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc3 A SG CYS 27 A CYS 1133 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc4 A SG CYS 30 A CYS 1136 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc5 A SG CYS 39 A CYS 1145 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc6 A SG CYS 42 A CYS 1148 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc7 A SG CYS 47 A CYS 1153 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc8 A ND1 HIS 54 A HIS 1160 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc9 A NE2 HIS 58 A HIS 1164 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc10 A ND1 HIS 64 A HIS 1170 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc11 A SG CYS 77 A CYS 1183 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc12 A SG CYS 80 A CYS 1186 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6CEF _atom_sites.fract_transf_matrix[1][1] 0.02457 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017848 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1301 1301 ZN ZN . C 2 ZN A 1 1302 1302 ZN ZN . D 2 ZN A 1 1303 1303 ZN ZN . E 3 UNX A 1 1304 1313 UNX UNX . F 3 UNX A 1 1305 1 UNX UNX . G 3 UNX A 1 1306 2 UNX UNX . H 4 EYJ A 1 1307 1 EYJ D26 . I 5 HOH A 1 1401 1403 HOH HOH . I 5 HOH A 2 1402 48 HOH HOH . I 5 HOH A 3 1403 16 HOH HOH . I 5 HOH A 4 1404 41 HOH HOH . I 5 HOH A 5 1405 1442 HOH HOH . I 5 HOH A 6 1406 1429 HOH HOH . I 5 HOH A 7 1407 13 HOH HOH . I 5 HOH A 8 1408 4 HOH HOH . I 5 HOH A 9 1409 1413 HOH HOH . I 5 HOH A 10 1410 1425 HOH HOH . I 5 HOH A 11 1411 1406 HOH HOH . I 5 HOH A 12 1412 1410 HOH HOH . I 5 HOH A 13 1413 1409 HOH HOH . I 5 HOH A 14 1414 1412 HOH HOH . I 5 HOH A 15 1415 1416 HOH HOH . I 5 HOH A 16 1416 25 HOH HOH . I 5 HOH A 17 1417 1419 HOH HOH . I 5 HOH A 18 1418 1423 HOH HOH . I 5 HOH A 19 1419 1411 HOH HOH . I 5 HOH A 20 1420 3 HOH HOH . I 5 HOH A 21 1421 1418 HOH HOH . I 5 HOH A 22 1422 23 HOH HOH . I 5 HOH A 23 1423 1420 HOH HOH . I 5 HOH A 24 1424 1407 HOH HOH . I 5 HOH A 25 1425 1427 HOH HOH . I 5 HOH A 26 1426 1431 HOH HOH . I 5 HOH A 27 1427 1443 HOH HOH . I 5 HOH A 28 1428 1424 HOH HOH . I 5 HOH A 29 1429 1439 HOH HOH . I 5 HOH A 30 1430 1421 HOH HOH . I 5 HOH A 31 1431 1402 HOH HOH . I 5 HOH A 32 1432 1428 HOH HOH . I 5 HOH A 33 1433 46 HOH HOH . I 5 HOH A 34 1434 47 HOH HOH . I 5 HOH A 35 1435 1441 HOH HOH . I 5 HOH A 36 1436 1437 HOH HOH . I 5 HOH A 37 1437 45 HOH HOH . I 5 HOH A 38 1438 51 HOH HOH . I 5 HOH A 39 1439 8 HOH HOH . I 5 HOH A 40 1440 1444 HOH HOH . I 5 HOH A 41 1441 1446 HOH HOH . I 5 HOH A 42 1442 1448 HOH HOH . I 5 HOH A 43 1443 17 HOH HOH . I 5 HOH A 44 1444 1426 HOH HOH . I 5 HOH A 45 1445 1417 HOH HOH . I 5 HOH A 46 1446 1432 HOH HOH . I 5 HOH A 47 1447 28 HOH HOH . I 5 HOH A 48 1448 1447 HOH HOH . I 5 HOH A 49 1449 15 HOH HOH . I 5 HOH A 50 1450 26 HOH HOH . I 5 HOH A 51 1451 1455 HOH HOH . I 5 HOH A 52 1452 1451 HOH HOH . I 5 HOH A 53 1453 43 HOH HOH . I 5 HOH A 54 1454 24 HOH HOH . I 5 HOH A 55 1455 1422 HOH HOH . I 5 HOH A 56 1456 1435 HOH HOH . I 5 HOH A 57 1457 1459 HOH HOH . I 5 HOH A 58 1458 1440 HOH HOH . I 5 HOH A 59 1459 49 HOH HOH . I 5 HOH A 60 1460 36 HOH HOH . I 5 HOH A 61 1461 37 HOH HOH . I 5 HOH A 62 1462 18 HOH HOH . I 5 HOH A 63 1463 42 HOH HOH . I 5 HOH A 64 1464 1460 HOH HOH . I 5 HOH A 65 1465 1465 HOH HOH . I 5 HOH A 66 1466 1468 HOH HOH . I 5 HOH A 67 1467 2 HOH HOH . I 5 HOH A 68 1468 1463 HOH HOH . I 5 HOH A 69 1469 1467 HOH HOH . I 5 HOH A 70 1470 1461 HOH HOH . I 5 HOH A 71 1471 1462 HOH HOH . I 5 HOH A 72 1472 1458 HOH HOH . I 5 HOH A 73 1473 1469 HOH HOH . I 5 HOH A 74 1474 20 HOH HOH . I 5 HOH A 75 1475 22 HOH HOH . I 5 HOH A 76 1476 29 HOH HOH . I 5 HOH A 77 1477 1 HOH HOH . I 5 HOH A 78 1478 1470 HOH HOH . I 5 HOH A 79 1479 1472 HOH HOH . I 5 HOH A 80 1480 44 HOH HOH . I 5 HOH A 81 1481 50 HOH HOH . I 5 HOH A 82 1482 1473 HOH HOH . I 5 HOH A 83 1483 1475 HOH HOH . I 5 HOH A 84 1484 1476 HOH HOH . I 5 HOH A 85 1485 1478 HOH HOH . I 5 HOH A 86 1486 1481 HOH HOH . I 5 HOH A 87 1487 1480 HOH HOH . I 5 HOH A 88 1488 1466 HOH HOH . I 5 HOH A 89 1489 14 HOH HOH . I 5 HOH A 90 1490 12 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -0.139 _atom_site.Cartn_y -6.004 _atom_site.Cartn_z -1.366 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #