data_6CEO # _model_server_result.job_id uA1BJ1nPCrXDzewwhkZcqQ _model_server_result.datetime_utc '2024-11-01 03:39:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ceo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":308}' # _entry.id 6CEO # _exptl.entry_id 6CEO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CEO _cell.length_a 65.44 _cell.length_b 88.93 _cell.length_c 99.933 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CEO _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 A,B,C,D,E,F,G,H,I,J 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 130.88 88.93 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 36 A GLU 16 1_555 H MG MG . A MG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc2 A OG SER 70 A SER 50 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? metalc ? metalc3 A OD1 ASN 71 A ASN 51 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc4 A OD2 ASP 74 A ASP 54 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc5 A O GLU 95 A GLU 75 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? metalc ? metalc6 A OG SER 133 A SER 113 1_555 G MG MG . A MG 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.864 ? metalc ? metalc7 C MG MG . A MG 302 1_555 J O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? metalc ? metalc8 E MG MG . A MG 304 1_555 J O HOH . A HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc9 E MG MG . A MG 304 1_555 J O HOH . A HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc10 F MG MG . A MG 305 1_555 J O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 124 n n C1 C2 EDO sing 125 n n C1 H11 EDO sing 126 n n C1 H12 EDO sing 127 n n O1 HO1 EDO sing 128 n n C2 O2 EDO sing 129 n n C2 H21 EDO sing 130 n n C2 H22 EDO sing 131 n n O2 HO2 EDO sing 132 n n # _atom_sites.entry_id 6CEO _atom_sites.fract_transf_matrix[1][1] 0.015281 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011245 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010007 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D57 A 1 301 1 D57 DRG . C 3 MG A 1 302 1 MG MG . D 3 MG A 1 303 3 MG MG . E 3 MG A 1 304 4 MG MG . F 3 MG A 1 305 6 MG MG . G 3 MG A 1 306 7 MG MG . H 3 MG A 1 307 8 MG MG . I 4 EDO A 1 308 1 EDO EDO . J 5 HOH A 1 401 138 HOH HOH . J 5 HOH A 2 402 83 HOH HOH . J 5 HOH A 3 403 45 HOH HOH . J 5 HOH A 4 404 155 HOH HOH . J 5 HOH A 5 405 15 HOH HOH . J 5 HOH A 6 406 59 HOH HOH . J 5 HOH A 7 407 162 HOH HOH . J 5 HOH A 8 408 60 HOH HOH . J 5 HOH A 9 409 95 HOH HOH . J 5 HOH A 10 410 91 HOH HOH . J 5 HOH A 11 411 25 HOH HOH . J 5 HOH A 12 412 32 HOH HOH . J 5 HOH A 13 413 37 HOH HOH . J 5 HOH A 14 414 53 HOH HOH . J 5 HOH A 15 415 68 HOH HOH . J 5 HOH A 16 416 101 HOH HOH . J 5 HOH A 17 417 35 HOH HOH . J 5 HOH A 18 418 10 HOH HOH . J 5 HOH A 19 419 13 HOH HOH . J 5 HOH A 20 420 4 HOH HOH . J 5 HOH A 21 421 73 HOH HOH . J 5 HOH A 22 422 38 HOH HOH . J 5 HOH A 23 423 61 HOH HOH . J 5 HOH A 24 424 24 HOH HOH . J 5 HOH A 25 425 79 HOH HOH . J 5 HOH A 26 426 1 HOH HOH . J 5 HOH A 27 427 17 HOH HOH . J 5 HOH A 28 428 69 HOH HOH . J 5 HOH A 29 429 43 HOH HOH . J 5 HOH A 30 430 149 HOH HOH . J 5 HOH A 31 431 151 HOH HOH . J 5 HOH A 32 432 88 HOH HOH . J 5 HOH A 33 433 93 HOH HOH . J 5 HOH A 34 434 20 HOH HOH . J 5 HOH A 35 435 89 HOH HOH . J 5 HOH A 36 436 87 HOH HOH . J 5 HOH A 37 437 102 HOH HOH . J 5 HOH A 38 438 145 HOH HOH . J 5 HOH A 39 439 27 HOH HOH . J 5 HOH A 40 440 51 HOH HOH . J 5 HOH A 41 441 21 HOH HOH . J 5 HOH A 42 442 23 HOH HOH . J 5 HOH A 43 443 119 HOH HOH . J 5 HOH A 44 444 44 HOH HOH . J 5 HOH A 45 445 118 HOH HOH . J 5 HOH A 46 446 50 HOH HOH . J 5 HOH A 47 447 154 HOH HOH . J 5 HOH A 48 448 133 HOH HOH . J 5 HOH A 49 449 22 HOH HOH . J 5 HOH A 50 450 80 HOH HOH . J 5 HOH A 51 451 46 HOH HOH . J 5 HOH A 52 452 84 HOH HOH . J 5 HOH A 53 453 26 HOH HOH . J 5 HOH A 54 454 120 HOH HOH . J 5 HOH A 55 455 49 HOH HOH . J 5 HOH A 56 456 104 HOH HOH . J 5 HOH A 57 457 7 HOH HOH . J 5 HOH A 58 458 65 HOH HOH . J 5 HOH A 59 459 123 HOH HOH . J 5 HOH A 60 460 66 HOH HOH . J 5 HOH A 61 461 30 HOH HOH . J 5 HOH A 62 462 58 HOH HOH . J 5 HOH A 63 463 175 HOH HOH . J 5 HOH A 64 464 176 HOH HOH . J 5 HOH A 65 465 167 HOH HOH . J 5 HOH A 66 466 81 HOH HOH . J 5 HOH A 67 467 98 HOH HOH . J 5 HOH A 68 468 140 HOH HOH . J 5 HOH A 69 469 57 HOH HOH . J 5 HOH A 70 470 6 HOH HOH . J 5 HOH A 71 471 9 HOH HOH . J 5 HOH A 72 472 127 HOH HOH . J 5 HOH A 73 473 70 HOH HOH . J 5 HOH A 74 474 18 HOH HOH . J 5 HOH A 75 475 136 HOH HOH . J 5 HOH A 76 476 94 HOH HOH . J 5 HOH A 77 477 108 HOH HOH . J 5 HOH A 78 478 109 HOH HOH . J 5 HOH A 79 479 16 HOH HOH . J 5 HOH A 80 480 117 HOH HOH . J 5 HOH A 81 481 71 HOH HOH . J 5 HOH A 82 482 72 HOH HOH . J 5 HOH A 83 483 3 HOH HOH . J 5 HOH A 84 484 169 HOH HOH . J 5 HOH A 85 485 135 HOH HOH . J 5 HOH A 86 486 90 HOH HOH . J 5 HOH A 87 487 48 HOH HOH . J 5 HOH A 88 488 19 HOH HOH . J 5 HOH A 89 489 12 HOH HOH . J 5 HOH A 90 490 114 HOH HOH . J 5 HOH A 91 491 14 HOH HOH . J 5 HOH A 92 492 177 HOH HOH . J 5 HOH A 93 493 132 HOH HOH . J 5 HOH A 94 494 107 HOH HOH . J 5 HOH A 95 495 96 HOH HOH . J 5 HOH A 96 496 174 HOH HOH . J 5 HOH A 97 497 163 HOH HOH . J 5 HOH A 98 498 8 HOH HOH . J 5 HOH A 99 499 54 HOH HOH . J 5 HOH A 100 500 97 HOH HOH . J 5 HOH A 101 501 142 HOH HOH . J 5 HOH A 102 502 152 HOH HOH . J 5 HOH A 103 503 110 HOH HOH . J 5 HOH A 104 504 36 HOH HOH . J 5 HOH A 105 505 47 HOH HOH . J 5 HOH A 106 506 40 HOH HOH . J 5 HOH A 107 507 67 HOH HOH . J 5 HOH A 108 508 42 HOH HOH . J 5 HOH A 109 509 63 HOH HOH . J 5 HOH A 110 510 111 HOH HOH . J 5 HOH A 111 511 106 HOH HOH . J 5 HOH A 112 512 62 HOH HOH . J 5 HOH A 113 513 11 HOH HOH . J 5 HOH A 114 514 124 HOH HOH . J 5 HOH A 115 515 171 HOH HOH . J 5 HOH A 116 516 156 HOH HOH . J 5 HOH A 117 517 82 HOH HOH . J 5 HOH A 118 518 137 HOH HOH . J 5 HOH A 119 519 153 HOH HOH . J 5 HOH A 120 520 92 HOH HOH . J 5 HOH A 121 521 141 HOH HOH . J 5 HOH A 122 522 147 HOH HOH . J 5 HOH A 123 523 115 HOH HOH . J 5 HOH A 124 524 41 HOH HOH . J 5 HOH A 125 525 5 HOH HOH . J 5 HOH A 126 526 121 HOH HOH . J 5 HOH A 127 527 29 HOH HOH . J 5 HOH A 128 528 77 HOH HOH . J 5 HOH A 129 529 85 HOH HOH . J 5 HOH A 130 530 178 HOH HOH . J 5 HOH A 131 531 150 HOH HOH . J 5 HOH A 132 532 159 HOH HOH . J 5 HOH A 133 533 78 HOH HOH . J 5 HOH A 134 534 112 HOH HOH . J 5 HOH A 135 535 56 HOH HOH . J 5 HOH A 136 536 113 HOH HOH . J 5 HOH A 137 537 148 HOH HOH . J 5 HOH A 138 538 164 HOH HOH . J 5 HOH A 139 539 161 HOH HOH . J 5 HOH A 140 540 166 HOH HOH . J 5 HOH A 141 541 126 HOH HOH . J 5 HOH A 142 542 173 HOH HOH . J 5 HOH A 143 543 76 HOH HOH . J 5 HOH A 144 544 105 HOH HOH . J 5 HOH A 145 545 74 HOH HOH . J 5 HOH A 146 546 160 HOH HOH . J 5 HOH A 147 547 34 HOH HOH . J 5 HOH A 148 548 122 HOH HOH . J 5 HOH A 149 549 86 HOH HOH . J 5 HOH A 150 550 157 HOH HOH . J 5 HOH A 151 551 165 HOH HOH . J 5 HOH A 152 552 75 HOH HOH . J 5 HOH A 153 553 99 HOH HOH . J 5 HOH A 154 554 146 HOH HOH . J 5 HOH A 155 555 172 HOH HOH . J 5 HOH A 156 556 103 HOH HOH . J 5 HOH A 157 557 168 HOH HOH . J 5 HOH A 158 558 170 HOH HOH . J 5 HOH A 159 559 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 4 67.152 39.857 19.772 1 52.66 ? C1 EDO 308 A 1 HETATM 2 O O1 EDO . . . I 4 65.772 39.476 19.863 1 50.17 ? O1 EDO 308 A 1 HETATM 3 C C2 EDO . . . I 4 67.958 38.721 20.375 1 48.19 ? C2 EDO 308 A 1 HETATM 4 O O2 EDO . . . I 4 67.077 37.974 21.226 1 59.03 ? O2 EDO 308 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #