data_6CER # _model_server_result.job_id JMJ0YF6K-92tURWw1D0Ngw _model_server_result.datetime_utc '2024-12-10 12:12:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cer # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":402}' # _entry.id 6CER # _exptl.entry_id 6CER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.12 _cell.angle_gamma 90 _cell.entry_id 6CER _cell.length_a 121.76 _cell.length_b 123.919 _cell.length_c 128.279 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CER _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,O,P,Q,R 1 1 E,F,G,H,K,L,M,N,S,T,U,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 L N N ? 4 N N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id K _struct_conn.ptnr1_label_atom_id O2A _struct_conn.ptnr1_label_comp_id TPP _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id E _struct_conn.ptnr1_auth_comp_id TPP _struct_conn.ptnr1_auth_seq_id 401 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id L _struct_conn.ptnr2_label_atom_id MG _struct_conn.ptnr2_label_comp_id MG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id E _struct_conn.ptnr2_auth_comp_id MG _struct_conn.ptnr2_auth_seq_id 402 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.279 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6CER _atom_sites.fract_transf_matrix[1][1] 0.008213 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004389 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00807 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008839 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 TPP A 1 401 1 TPP TDP . J 3 TPP C 1 401 2 TPP TDP . K 3 TPP E 1 401 3 TPP TDP . L 4 MG E 1 402 2 MG MG . M 3 TPP G 1 401 4 TPP TDP . N 4 MG G 1 402 1 MG MG . O 5 HOH A 1 501 18 HOH HOH . O 5 HOH A 2 502 140 HOH HOH . O 5 HOH A 3 503 162 HOH HOH . O 5 HOH A 4 504 277 HOH HOH . O 5 HOH A 5 505 223 HOH HOH . O 5 HOH A 6 506 184 HOH HOH . O 5 HOH A 7 507 96 HOH HOH . O 5 HOH A 8 508 48 HOH HOH . O 5 HOH A 9 509 90 HOH HOH . O 5 HOH A 10 510 85 HOH HOH . O 5 HOH A 11 511 60 HOH HOH . O 5 HOH A 12 512 137 HOH HOH . O 5 HOH A 13 513 155 HOH HOH . O 5 HOH A 14 514 57 HOH HOH . O 5 HOH A 15 515 178 HOH HOH . O 5 HOH A 16 516 15 HOH HOH . O 5 HOH A 17 517 116 HOH HOH . O 5 HOH A 18 518 87 HOH HOH . O 5 HOH A 19 519 262 HOH HOH . O 5 HOH A 20 520 29 HOH HOH . O 5 HOH A 21 521 257 HOH HOH . O 5 HOH A 22 522 112 HOH HOH . O 5 HOH A 23 523 133 HOH HOH . O 5 HOH A 24 524 141 HOH HOH . O 5 HOH A 25 525 159 HOH HOH . O 5 HOH A 26 526 272 HOH HOH . O 5 HOH A 27 527 275 HOH HOH . O 5 HOH A 28 528 20 HOH HOH . O 5 HOH A 29 529 143 HOH HOH . O 5 HOH A 30 530 239 HOH HOH . O 5 HOH A 31 531 247 HOH HOH . P 5 HOH B 1 401 166 HOH HOH . P 5 HOH B 2 402 287 HOH HOH . P 5 HOH B 3 403 289 HOH HOH . P 5 HOH B 4 404 102 HOH HOH . P 5 HOH B 5 405 293 HOH HOH . P 5 HOH B 6 406 118 HOH HOH . P 5 HOH B 7 407 147 HOH HOH . P 5 HOH B 8 408 2 HOH HOH . P 5 HOH B 9 409 153 HOH HOH . P 5 HOH B 10 410 126 HOH HOH . P 5 HOH B 11 411 190 HOH HOH . P 5 HOH B 12 412 11 HOH HOH . P 5 HOH B 13 413 63 HOH HOH . P 5 HOH B 14 414 28 HOH HOH . P 5 HOH B 15 415 152 HOH HOH . P 5 HOH B 16 416 69 HOH HOH . P 5 HOH B 17 417 119 HOH HOH . P 5 HOH B 18 418 42 HOH HOH . P 5 HOH B 19 419 130 HOH HOH . P 5 HOH B 20 420 97 HOH HOH . P 5 HOH B 21 421 163 HOH HOH . P 5 HOH B 22 422 59 HOH HOH . P 5 HOH B 23 423 30 HOH HOH . P 5 HOH B 24 424 199 HOH HOH . P 5 HOH B 25 425 7 HOH HOH . P 5 HOH B 26 426 75 HOH HOH . P 5 HOH B 27 427 193 HOH HOH . P 5 HOH B 28 428 114 HOH HOH . P 5 HOH B 29 429 187 HOH HOH . P 5 HOH B 30 430 177 HOH HOH . P 5 HOH B 31 431 221 HOH HOH . P 5 HOH B 32 432 142 HOH HOH . P 5 HOH B 33 433 299 HOH HOH . P 5 HOH B 34 434 213 HOH HOH . P 5 HOH B 35 435 217 HOH HOH . P 5 HOH B 36 436 222 HOH HOH . P 5 HOH B 37 437 148 HOH HOH . P 5 HOH B 38 438 33 HOH HOH . P 5 HOH B 39 439 71 HOH HOH . P 5 HOH B 40 440 269 HOH HOH . P 5 HOH B 41 441 95 HOH HOH . P 5 HOH B 42 442 203 HOH HOH . P 5 HOH B 43 443 215 HOH HOH . P 5 HOH B 44 444 252 HOH HOH . P 5 HOH B 45 445 24 HOH HOH . P 5 HOH B 46 446 23 HOH HOH . P 5 HOH B 47 447 258 HOH HOH . P 5 HOH B 48 448 284 HOH HOH . Q 5 HOH C 1 501 249 HOH HOH . Q 5 HOH C 2 502 121 HOH HOH . Q 5 HOH C 3 503 240 HOH HOH . Q 5 HOH C 4 504 43 HOH HOH . Q 5 HOH C 5 505 198 HOH HOH . Q 5 HOH C 6 506 246 HOH HOH . Q 5 HOH C 7 507 214 HOH HOH . Q 5 HOH C 8 508 231 HOH HOH . Q 5 HOH C 9 509 138 HOH HOH . Q 5 HOH C 10 510 302 HOH HOH . Q 5 HOH C 11 511 76 HOH HOH . Q 5 HOH C 12 512 136 HOH HOH . R 5 HOH D 1 401 34 HOH HOH . R 5 HOH D 2 402 226 HOH HOH . R 5 HOH D 3 403 218 HOH HOH . R 5 HOH D 4 404 296 HOH HOH . R 5 HOH D 5 405 145 HOH HOH . R 5 HOH D 6 406 158 HOH HOH . R 5 HOH D 7 407 45 HOH HOH . R 5 HOH D 8 408 104 HOH HOH . R 5 HOH D 9 409 9 HOH HOH . R 5 HOH D 10 410 170 HOH HOH . R 5 HOH D 11 411 220 HOH HOH . R 5 HOH D 12 412 46 HOH HOH . R 5 HOH D 13 413 150 HOH HOH . R 5 HOH D 14 414 169 HOH HOH . R 5 HOH D 15 415 91 HOH HOH . R 5 HOH D 16 416 154 HOH HOH . R 5 HOH D 17 417 139 HOH HOH . R 5 HOH D 18 418 230 HOH HOH . R 5 HOH D 19 419 168 HOH HOH . R 5 HOH D 20 420 279 HOH HOH . R 5 HOH D 21 421 66 HOH HOH . R 5 HOH D 22 422 41 HOH HOH . R 5 HOH D 23 423 4 HOH HOH . R 5 HOH D 24 424 236 HOH HOH . R 5 HOH D 25 425 267 HOH HOH . R 5 HOH D 26 426 176 HOH HOH . R 5 HOH D 27 427 84 HOH HOH . R 5 HOH D 28 428 274 HOH HOH . R 5 HOH D 29 429 80 HOH HOH . R 5 HOH D 30 430 297 HOH HOH . R 5 HOH D 31 431 27 HOH HOH . R 5 HOH D 32 432 248 HOH HOH . R 5 HOH D 33 433 19 HOH HOH . R 5 HOH D 34 434 282 HOH HOH . R 5 HOH D 35 435 79 HOH HOH . R 5 HOH D 36 436 192 HOH HOH . R 5 HOH D 37 437 195 HOH HOH . R 5 HOH D 38 438 65 HOH HOH . R 5 HOH D 39 439 55 HOH HOH . R 5 HOH D 40 440 35 HOH HOH . R 5 HOH D 41 441 16 HOH HOH . R 5 HOH D 42 442 25 HOH HOH . R 5 HOH D 43 443 10 HOH HOH . R 5 HOH D 44 444 216 HOH HOH . R 5 HOH D 45 445 261 HOH HOH . R 5 HOH D 46 446 12 HOH HOH . R 5 HOH D 47 447 250 HOH HOH . R 5 HOH D 48 448 185 HOH HOH . R 5 HOH D 49 449 237 HOH HOH . R 5 HOH D 50 450 268 HOH HOH . R 5 HOH D 51 451 280 HOH HOH . R 5 HOH D 52 452 180 HOH HOH . R 5 HOH D 53 453 211 HOH HOH . R 5 HOH D 54 454 266 HOH HOH . R 5 HOH D 55 455 194 HOH HOH . S 5 HOH E 1 501 303 HOH HOH . S 5 HOH E 2 502 49 HOH HOH . S 5 HOH E 3 503 53 HOH HOH . S 5 HOH E 4 504 129 HOH HOH . S 5 HOH E 5 505 283 HOH HOH . S 5 HOH E 6 506 201 HOH HOH . S 5 HOH E 7 507 172 HOH HOH . S 5 HOH E 8 508 56 HOH HOH . S 5 HOH E 9 509 54 HOH HOH . S 5 HOH E 10 510 234 HOH HOH . S 5 HOH E 11 511 74 HOH HOH . S 5 HOH E 12 512 40 HOH HOH . S 5 HOH E 13 513 47 HOH HOH . S 5 HOH E 14 514 3 HOH HOH . S 5 HOH E 15 515 82 HOH HOH . S 5 HOH E 16 516 94 HOH HOH . S 5 HOH E 17 517 182 HOH HOH . S 5 HOH E 18 518 276 HOH HOH . S 5 HOH E 19 519 38 HOH HOH . S 5 HOH E 20 520 189 HOH HOH . S 5 HOH E 21 521 294 HOH HOH . T 5 HOH F 1 401 144 HOH HOH . T 5 HOH F 2 402 286 HOH HOH . T 5 HOH F 3 403 5 HOH HOH . T 5 HOH F 4 404 77 HOH HOH . T 5 HOH F 5 405 157 HOH HOH . T 5 HOH F 6 406 13 HOH HOH . T 5 HOH F 7 407 64 HOH HOH . T 5 HOH F 8 408 197 HOH HOH . T 5 HOH F 9 409 183 HOH HOH . T 5 HOH F 10 410 174 HOH HOH . T 5 HOH F 11 411 171 HOH HOH . T 5 HOH F 12 412 292 HOH HOH . T 5 HOH F 13 413 36 HOH HOH . T 5 HOH F 14 414 6 HOH HOH . T 5 HOH F 15 415 265 HOH HOH . T 5 HOH F 16 416 86 HOH HOH . T 5 HOH F 17 417 165 HOH HOH . T 5 HOH F 18 418 100 HOH HOH . T 5 HOH F 19 419 108 HOH HOH . T 5 HOH F 20 420 14 HOH HOH . T 5 HOH F 21 421 242 HOH HOH . T 5 HOH F 22 422 72 HOH HOH . T 5 HOH F 23 423 37 HOH HOH . T 5 HOH F 24 424 245 HOH HOH . T 5 HOH F 25 425 256 HOH HOH . T 5 HOH F 26 426 156 HOH HOH . T 5 HOH F 27 427 51 HOH HOH . T 5 HOH F 28 428 70 HOH HOH . T 5 HOH F 29 429 224 HOH HOH . T 5 HOH F 30 430 68 HOH HOH . T 5 HOH F 31 431 50 HOH HOH . T 5 HOH F 32 432 61 HOH HOH . T 5 HOH F 33 433 124 HOH HOH . T 5 HOH F 34 434 208 HOH HOH . T 5 HOH F 35 435 233 HOH HOH . T 5 HOH F 36 436 67 HOH HOH . T 5 HOH F 37 437 62 HOH HOH . T 5 HOH F 38 438 83 HOH HOH . T 5 HOH F 39 439 255 HOH HOH . T 5 HOH F 40 440 22 HOH HOH . T 5 HOH F 41 441 209 HOH HOH . T 5 HOH F 42 442 259 HOH HOH . T 5 HOH F 43 443 117 HOH HOH . T 5 HOH F 44 444 271 HOH HOH . T 5 HOH F 45 445 188 HOH HOH . T 5 HOH F 46 446 81 HOH HOH . T 5 HOH F 47 447 196 HOH HOH . U 5 HOH G 1 501 229 HOH HOH . U 5 HOH G 2 502 300 HOH HOH . U 5 HOH G 3 503 298 HOH HOH . U 5 HOH G 4 504 260 HOH HOH . U 5 HOH G 5 505 281 HOH HOH . U 5 HOH G 6 506 127 HOH HOH . U 5 HOH G 7 507 173 HOH HOH . U 5 HOH G 8 508 151 HOH HOH . U 5 HOH G 9 509 206 HOH HOH . U 5 HOH G 10 510 135 HOH HOH . U 5 HOH G 11 511 134 HOH HOH . U 5 HOH G 12 512 39 HOH HOH . U 5 HOH G 13 513 253 HOH HOH . U 5 HOH G 14 514 8 HOH HOH . U 5 HOH G 15 515 225 HOH HOH . U 5 HOH G 16 516 125 HOH HOH . U 5 HOH G 17 517 101 HOH HOH . U 5 HOH G 18 518 301 HOH HOH . U 5 HOH G 19 519 179 HOH HOH . U 5 HOH G 20 520 105 HOH HOH . U 5 HOH G 21 521 200 HOH HOH . U 5 HOH G 22 522 110 HOH HOH . U 5 HOH G 23 523 243 HOH HOH . U 5 HOH G 24 524 115 HOH HOH . U 5 HOH G 25 525 270 HOH HOH . U 5 HOH G 26 526 131 HOH HOH . U 5 HOH G 27 527 107 HOH HOH . U 5 HOH G 28 528 181 HOH HOH . U 5 HOH G 29 529 123 HOH HOH . U 5 HOH G 30 530 103 HOH HOH . U 5 HOH G 31 531 93 HOH HOH . U 5 HOH G 32 532 52 HOH HOH . U 5 HOH G 33 533 99 HOH HOH . U 5 HOH G 34 534 210 HOH HOH . U 5 HOH G 35 535 202 HOH HOH . U 5 HOH G 36 536 254 HOH HOH . U 5 HOH G 37 537 264 HOH HOH . V 5 HOH H 1 401 290 HOH HOH . V 5 HOH H 2 402 291 HOH HOH . V 5 HOH H 3 403 238 HOH HOH . V 5 HOH H 4 404 288 HOH HOH . V 5 HOH H 5 405 175 HOH HOH . V 5 HOH H 6 406 128 HOH HOH . V 5 HOH H 7 407 149 HOH HOH . V 5 HOH H 8 408 31 HOH HOH . V 5 HOH H 9 409 241 HOH HOH . V 5 HOH H 10 410 73 HOH HOH . V 5 HOH H 11 411 92 HOH HOH . V 5 HOH H 12 412 26 HOH HOH . V 5 HOH H 13 413 219 HOH HOH . V 5 HOH H 14 414 32 HOH HOH . V 5 HOH H 15 415 106 HOH HOH . V 5 HOH H 16 416 146 HOH HOH . V 5 HOH H 17 417 120 HOH HOH . V 5 HOH H 18 418 58 HOH HOH . V 5 HOH H 19 419 160 HOH HOH . V 5 HOH H 20 420 278 HOH HOH . V 5 HOH H 21 421 44 HOH HOH . V 5 HOH H 22 422 1 HOH HOH . V 5 HOH H 23 423 228 HOH HOH . V 5 HOH H 24 424 186 HOH HOH . V 5 HOH H 25 425 207 HOH HOH . V 5 HOH H 26 426 113 HOH HOH . V 5 HOH H 27 427 111 HOH HOH . V 5 HOH H 28 428 21 HOH HOH . V 5 HOH H 29 429 88 HOH HOH . V 5 HOH H 30 430 161 HOH HOH . V 5 HOH H 31 431 212 HOH HOH . V 5 HOH H 32 432 263 HOH HOH . V 5 HOH H 33 433 251 HOH HOH . V 5 HOH H 34 434 205 HOH HOH . V 5 HOH H 35 435 227 HOH HOH . V 5 HOH H 36 436 132 HOH HOH . V 5 HOH H 37 437 191 HOH HOH . V 5 HOH H 38 438 98 HOH HOH . V 5 HOH H 39 439 273 HOH HOH . V 5 HOH H 40 440 167 HOH HOH . V 5 HOH H 41 441 17 HOH HOH . V 5 HOH H 42 442 122 HOH HOH . V 5 HOH H 43 443 89 HOH HOH . V 5 HOH H 44 444 109 HOH HOH . V 5 HOH H 45 445 204 HOH HOH . V 5 HOH H 46 446 164 HOH HOH . V 5 HOH H 47 447 244 HOH HOH . V 5 HOH H 48 448 78 HOH HOH . V 5 HOH H 49 449 235 HOH HOH . V 5 HOH H 50 450 232 HOH HOH . V 5 HOH H 51 451 285 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 4 _atom_site.Cartn_x 29.365 _atom_site.Cartn_y -17.997 _atom_site.Cartn_z -12.778 _atom_site.occupancy 0.98 _atom_site.B_iso_or_equiv 64.08 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #