data_6CF0 # _model_server_result.job_id bRzWJbBZJXo_SUmVQvkdnA _model_server_result.datetime_utc '2024-11-18 00:19:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cf0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":206}' # _entry.id 6CF0 # _exptl.entry_id 6CF0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CF0 _cell.length_a 90.15 _cell.length_b 90.15 _cell.length_c 45.324 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc2 B FE HEM . A HEM 201 1_555 C N NO2 . A NO2 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 6CF0 _atom_sites.fract_transf_matrix[1][1] 0.011093 _atom_sites.fract_transf_matrix[1][2] 0.006404 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012809 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022063 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 154 HEM HEM . C 3 NO2 A 1 202 200 NO2 NO2 . D 3 NO2 A 1 203 202 NO2 NO2 . E 3 NO2 A 1 204 203 NO2 NO2 . F 3 NO2 A 1 205 204 NO2 NO2 . G 4 GOL A 1 206 402 GOL GOL . H 4 GOL A 1 207 1 GOL GOL . I 4 GOL A 1 208 2 GOL GOL . J 5 SO4 A 1 209 1 SO4 SO4 . K 5 SO4 A 1 210 2 SO4 SO4 . L 6 HOH A 1 301 54 HOH HOH . L 6 HOH A 2 302 350 HOH HOH . L 6 HOH A 3 303 555 HOH HOH . L 6 HOH A 4 304 44 HOH HOH . L 6 HOH A 5 305 17 HOH HOH . L 6 HOH A 6 306 523 HOH HOH . L 6 HOH A 7 307 14 HOH HOH . L 6 HOH A 8 308 518 HOH HOH . L 6 HOH A 9 309 66 HOH HOH . L 6 HOH A 10 310 59 HOH HOH . L 6 HOH A 11 311 507 HOH HOH . L 6 HOH A 12 312 73 HOH HOH . L 6 HOH A 13 313 325 HOH HOH . L 6 HOH A 14 314 348 HOH HOH . L 6 HOH A 15 315 541 HOH HOH . L 6 HOH A 16 316 539 HOH HOH . L 6 HOH A 17 317 511 HOH HOH . L 6 HOH A 18 318 19 HOH HOH . L 6 HOH A 19 319 548 HOH HOH . L 6 HOH A 20 320 504 HOH HOH . L 6 HOH A 21 321 340 HOH HOH . L 6 HOH A 22 322 544 HOH HOH . L 6 HOH A 23 323 543 HOH HOH . L 6 HOH A 24 324 532 HOH HOH . L 6 HOH A 25 325 329 HOH HOH . L 6 HOH A 26 326 538 HOH HOH . L 6 HOH A 27 327 326 HOH HOH . L 6 HOH A 28 328 46 HOH HOH . L 6 HOH A 29 329 328 HOH HOH . L 6 HOH A 30 330 509 HOH HOH . L 6 HOH A 31 331 322 HOH HOH . L 6 HOH A 32 332 55 HOH HOH . L 6 HOH A 33 333 550 HOH HOH . L 6 HOH A 34 334 21 HOH HOH . L 6 HOH A 35 335 526 HOH HOH . L 6 HOH A 36 336 514 HOH HOH . L 6 HOH A 37 337 519 HOH HOH . L 6 HOH A 38 338 522 HOH HOH . L 6 HOH A 39 339 72 HOH HOH . L 6 HOH A 40 340 347 HOH HOH . L 6 HOH A 41 341 521 HOH HOH . L 6 HOH A 42 342 37 HOH HOH . L 6 HOH A 43 343 304 HOH HOH . L 6 HOH A 44 344 9 HOH HOH . L 6 HOH A 45 345 531 HOH HOH . L 6 HOH A 46 346 510 HOH HOH . L 6 HOH A 47 347 516 HOH HOH . L 6 HOH A 48 348 534 HOH HOH . L 6 HOH A 49 349 305 HOH HOH . L 6 HOH A 50 350 345 HOH HOH . L 6 HOH A 51 351 320 HOH HOH . L 6 HOH A 52 352 336 HOH HOH . L 6 HOH A 53 353 306 HOH HOH . L 6 HOH A 54 354 501 HOH HOH . L 6 HOH A 55 355 535 HOH HOH . L 6 HOH A 56 356 344 HOH HOH . L 6 HOH A 57 357 337 HOH HOH . L 6 HOH A 58 358 41 HOH HOH . L 6 HOH A 59 359 309 HOH HOH . L 6 HOH A 60 360 330 HOH HOH . L 6 HOH A 61 361 525 HOH HOH . L 6 HOH A 62 362 311 HOH HOH . L 6 HOH A 63 363 314 HOH HOH . L 6 HOH A 64 364 343 HOH HOH . L 6 HOH A 65 365 513 HOH HOH . L 6 HOH A 66 366 27 HOH HOH . L 6 HOH A 67 367 335 HOH HOH . L 6 HOH A 68 368 20 HOH HOH . L 6 HOH A 69 369 324 HOH HOH . L 6 HOH A 70 370 49 HOH HOH . L 6 HOH A 71 371 312 HOH HOH . L 6 HOH A 72 372 503 HOH HOH . L 6 HOH A 73 373 29 HOH HOH . L 6 HOH A 74 374 24 HOH HOH . L 6 HOH A 75 375 10 HOH HOH . L 6 HOH A 76 376 307 HOH HOH . L 6 HOH A 77 377 327 HOH HOH . L 6 HOH A 78 378 34 HOH HOH . L 6 HOH A 79 379 313 HOH HOH . L 6 HOH A 80 380 302 HOH HOH . L 6 HOH A 81 381 51 HOH HOH . L 6 HOH A 82 382 300 HOH HOH . L 6 HOH A 83 383 530 HOH HOH . L 6 HOH A 84 384 4 HOH HOH . L 6 HOH A 85 385 331 HOH HOH . L 6 HOH A 86 386 533 HOH HOH . L 6 HOH A 87 387 32 HOH HOH . L 6 HOH A 88 388 351 HOH HOH . L 6 HOH A 89 389 334 HOH HOH . L 6 HOH A 90 390 338 HOH HOH . L 6 HOH A 91 391 528 HOH HOH . L 6 HOH A 92 392 319 HOH HOH . L 6 HOH A 93 393 88 HOH HOH . L 6 HOH A 94 394 93 HOH HOH . L 6 HOH A 95 395 315 HOH HOH . L 6 HOH A 96 396 556 HOH HOH . L 6 HOH A 97 397 5 HOH HOH . L 6 HOH A 98 398 502 HOH HOH . L 6 HOH A 99 399 349 HOH HOH . L 6 HOH A 100 400 43 HOH HOH . L 6 HOH A 101 401 53 HOH HOH . L 6 HOH A 102 402 346 HOH HOH . L 6 HOH A 103 403 310 HOH HOH . L 6 HOH A 104 404 508 HOH HOH . L 6 HOH A 105 405 58 HOH HOH . L 6 HOH A 106 406 28 HOH HOH . L 6 HOH A 107 407 321 HOH HOH . L 6 HOH A 108 408 39 HOH HOH . L 6 HOH A 109 409 74 HOH HOH . L 6 HOH A 110 410 91 HOH HOH . L 6 HOH A 111 411 536 HOH HOH . L 6 HOH A 112 412 13 HOH HOH . L 6 HOH A 113 413 26 HOH HOH . L 6 HOH A 114 414 25 HOH HOH . L 6 HOH A 115 415 22 HOH HOH . L 6 HOH A 116 416 3 HOH HOH . L 6 HOH A 117 417 545 HOH HOH . L 6 HOH A 118 418 76 HOH HOH . L 6 HOH A 119 419 515 HOH HOH . L 6 HOH A 120 420 342 HOH HOH . L 6 HOH A 121 421 308 HOH HOH . L 6 HOH A 122 422 2 HOH HOH . L 6 HOH A 123 423 35 HOH HOH . L 6 HOH A 124 424 1 HOH HOH . L 6 HOH A 125 425 537 HOH HOH . L 6 HOH A 126 426 540 HOH HOH . L 6 HOH A 127 427 557 HOH HOH . L 6 HOH A 128 428 38 HOH HOH . L 6 HOH A 129 429 48 HOH HOH . L 6 HOH A 130 430 517 HOH HOH . L 6 HOH A 131 431 92 HOH HOH . L 6 HOH A 132 432 90 HOH HOH . L 6 HOH A 133 433 560 HOH HOH . L 6 HOH A 134 434 558 HOH HOH . L 6 HOH A 135 435 553 HOH HOH . L 6 HOH A 136 436 341 HOH HOH . L 6 HOH A 137 437 549 HOH HOH . L 6 HOH A 138 438 552 HOH HOH . L 6 HOH A 139 439 42 HOH HOH . L 6 HOH A 140 440 61 HOH HOH . L 6 HOH A 141 441 505 HOH HOH . L 6 HOH A 142 442 82 HOH HOH . L 6 HOH A 143 443 542 HOH HOH . L 6 HOH A 144 444 529 HOH HOH . L 6 HOH A 145 445 562 HOH HOH . L 6 HOH A 146 446 57 HOH HOH . L 6 HOH A 147 447 84 HOH HOH . L 6 HOH A 148 448 551 HOH HOH . L 6 HOH A 149 449 40 HOH HOH . L 6 HOH A 150 450 547 HOH HOH . L 6 HOH A 151 451 512 HOH HOH . L 6 HOH A 152 452 520 HOH HOH . L 6 HOH A 153 453 506 HOH HOH . L 6 HOH A 154 454 559 HOH HOH . L 6 HOH A 155 455 546 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 119.607 -18.262 -27.12 1 33.13 ? C1 GOL 206 A 1 HETATM 2 O O1 GOL . . . G 4 119.065 -17.493 -28.23 1 32.67 ? O1 GOL 206 A 1 HETATM 3 C C2 GOL . . . G 4 120.836 -18.973 -27.542 1 32.84 ? C2 GOL 206 A 1 HETATM 4 O O2 GOL . . . G 4 121.128 -18.304 -28.657 1 29.8 ? O2 GOL 206 A 1 HETATM 5 C C3 GOL . . . G 4 122.043 -18.683 -26.713 1 36.01 ? C3 GOL 206 A 1 HETATM 6 O O3 GOL . . . G 4 123.298 -19.192 -27.185 1 35.02 ? O3 GOL 206 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 1372 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 6 #