data_6CFM
#
_model_server_result.job_id            YfIPhXlet4EloBDOy1GQHA 
_model_server_result.datetime_utc      '2025-01-10 07:58:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6cfm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":402}' 
#
_entry.id    6CFM 
#
_exptl.entry_id    6CFM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              359.33 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (7R)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7,8-dimethyl-5-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6CFM 
_cell.length_a            91.618 
_cell.length_b            96.839 
_cell.length_c            192.318 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CFM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,P 1 1 
B,G,H,I,J,Q 2 1 
C,K,R 3 1 
D,L,M,N,O,S 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 J N N 
? 3 O N N 
#
_chem_comp.formula           'C17 H15 F2 N5 O2' 
_chem_comp.formula_weight    359.33 
_chem_comp.id                EA7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (7R)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7,8-dimethyl-5-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C16 C15 EA7 trip 83 n n 
N4 C6 EA7 doub 84 n y 
N4 C5 EA7 sing 85 n y 
C15 C14 EA7 sing 86 n n 
C6 C2 EA7 sing 87 n y 
N5 C5 EA7 sing 88 n n 
N5 C7 EA7 sing 89 n n 
C12 C7 EA7 doub 90 n y 
C12 C11 EA7 sing 91 n y 
C14 N2 EA7 sing 92 n n 
C5 N3 EA7 doub 93 n y 
F1 C11 EA7 sing 94 n n 
C7 C8 EA7 sing 95 n y 
C2 N2 EA7 sing 96 n n 
C2 C1 EA7 doub 97 n y 
C11 C10 EA7 doub 98 n y 
N2 C3 EA7 sing 99 n n 
N3 C1 EA7 sing 100 n y 
C1 N1 EA7 sing 101 n n 
C8 C9 EA7 doub 102 n y 
C10 C9 EA7 sing 103 n y 
C10 O2 EA7 sing 104 n n 
C3 O1 EA7 doub 105 n n 
C3 C4 EA7 sing 106 n n 
C9 F2 EA7 sing 107 n n 
N1 C4 EA7 sing 108 n n 
N1 C17 EA7 sing 109 n n 
C4 C13 EA7 sing 110 n n 
C4 H1 EA7 sing 111 n n 
C14 H2 EA7 sing 112 n n 
C14 H3 EA7 sing 113 n n 
C6 H4 EA7 sing 114 n n 
C8 H5 EA7 sing 115 n n 
C12 H6 EA7 sing 116 n n 
C13 H7 EA7 sing 117 n n 
C13 H8 EA7 sing 118 n n 
C13 H9 EA7 sing 119 n n 
N5 H10 EA7 sing 120 n n 
C16 H11 EA7 sing 121 n n 
C17 H12 EA7 sing 122 n n 
C17 H13 EA7 sing 123 n n 
C17 H14 EA7 sing 124 n n 
O2 H15 EA7 sing 125 n n 
#
_atom_sites.entry_id                     6CFM 
_atom_sites.fract_transf_matrix[1][1]    0.010915 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010326 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0052 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CL A 1 401 7 CL CL . 
F 3 EA7 A 1 402 1 EA7 DRG . 
G 2 CL B 1 401 4 CL CL . 
H 2 CL B 1 402 6 CL CL . 
I 4 GOL B 1 403 1 GOL GOL . 
J 3 EA7 B 1 404 2 EA7 DRG . 
K 2 CL C 1 401 5 CL CL . 
L 2 CL D 1 401 1 CL CL . 
M 2 CL D 1 402 2 CL CL . 
N 2 CL D 1 403 3 CL CL . 
O 3 EA7 D 1 404 3 EA7 DRG . 
P 5 HOH A 1 501 12 HOH HOH . 
P 5 HOH A 2 502 46 HOH HOH . 
P 5 HOH A 3 503 47 HOH HOH . 
P 5 HOH A 4 504 28 HOH HOH . 
P 5 HOH A 5 505 19 HOH HOH . 
P 5 HOH A 6 506 68 HOH HOH . 
P 5 HOH A 7 507 79 HOH HOH . 
P 5 HOH A 8 508 49 HOH HOH . 
P 5 HOH A 9 509 30 HOH HOH . 
P 5 HOH A 10 510 8 HOH HOH . 
P 5 HOH A 11 511 171 HOH HOH . 
P 5 HOH A 12 512 60 HOH HOH . 
P 5 HOH A 13 513 11 HOH HOH . 
P 5 HOH A 14 514 105 HOH HOH . 
P 5 HOH A 15 515 78 HOH HOH . 
P 5 HOH A 16 516 35 HOH HOH . 
P 5 HOH A 17 517 23 HOH HOH . 
P 5 HOH A 18 518 2 HOH HOH . 
P 5 HOH A 19 519 13 HOH HOH . 
P 5 HOH A 20 520 63 HOH HOH . 
P 5 HOH A 21 521 37 HOH HOH . 
P 5 HOH A 22 522 31 HOH HOH . 
P 5 HOH A 23 523 70 HOH HOH . 
P 5 HOH A 24 524 59 HOH HOH . 
P 5 HOH A 25 525 34 HOH HOH . 
P 5 HOH A 26 526 28 HOH HOH . 
P 5 HOH A 27 527 80 HOH HOH . 
P 5 HOH A 28 528 141 HOH HOH . 
P 5 HOH A 29 529 81 HOH HOH . 
P 5 HOH A 30 530 255 HOH HOH . 
P 5 HOH A 31 531 50 HOH HOH . 
P 5 HOH A 32 532 22 HOH HOH . 
P 5 HOH A 33 533 91 HOH HOH . 
P 5 HOH A 34 534 38 HOH HOH . 
P 5 HOH A 35 535 55 HOH HOH . 
P 5 HOH A 36 536 19 HOH HOH . 
P 5 HOH A 37 537 76 HOH HOH . 
P 5 HOH A 38 538 84 HOH HOH . 
P 5 HOH A 39 539 56 HOH HOH . 
P 5 HOH A 40 540 379 HOH HOH . 
P 5 HOH A 41 541 57 HOH HOH . 
P 5 HOH A 42 542 72 HOH HOH . 
P 5 HOH A 43 543 318 HOH HOH . 
P 5 HOH A 44 544 57 HOH HOH . 
P 5 HOH A 45 545 75 HOH HOH . 
P 5 HOH A 46 546 22 HOH HOH . 
P 5 HOH A 47 547 74 HOH HOH . 
P 5 HOH A 48 548 45 HOH HOH . 
P 5 HOH A 49 549 45 HOH HOH . 
P 5 HOH A 50 550 480 HOH HOH . 
P 5 HOH A 51 551 54 HOH HOH . 
P 5 HOH A 52 552 471 HOH HOH . 
P 5 HOH A 53 553 43 HOH HOH . 
Q 5 HOH B 1 501 39 HOH HOH . 
Q 5 HOH B 2 502 51 HOH HOH . 
Q 5 HOH B 3 503 67 HOH HOH . 
Q 5 HOH B 4 504 10 HOH HOH . 
Q 5 HOH B 5 505 36 HOH HOH . 
Q 5 HOH B 6 506 31 HOH HOH . 
Q 5 HOH B 7 507 109 HOH HOH . 
Q 5 HOH B 8 508 6 HOH HOH . 
Q 5 HOH B 9 509 47 HOH HOH . 
Q 5 HOH B 10 510 181 HOH HOH . 
Q 5 HOH B 11 511 44 HOH HOH . 
Q 5 HOH B 12 512 5 HOH HOH . 
Q 5 HOH B 13 513 61 HOH HOH . 
Q 5 HOH B 14 514 117 HOH HOH . 
Q 5 HOH B 15 515 114 HOH HOH . 
Q 5 HOH B 16 516 96 HOH HOH . 
Q 5 HOH B 17 517 5 HOH HOH . 
Q 5 HOH B 18 518 116 HOH HOH . 
Q 5 HOH B 19 519 52 HOH HOH . 
Q 5 HOH B 20 520 21 HOH HOH . 
Q 5 HOH B 21 521 215 HOH HOH . 
Q 5 HOH B 22 522 25 HOH HOH . 
Q 5 HOH B 23 523 97 HOH HOH . 
Q 5 HOH B 24 524 149 HOH HOH . 
Q 5 HOH B 25 525 20 HOH HOH . 
Q 5 HOH B 26 526 239 HOH HOH . 
Q 5 HOH B 27 527 491 HOH HOH . 
Q 5 HOH B 28 528 23 HOH HOH . 
Q 5 HOH B 29 529 26 HOH HOH . 
Q 5 HOH B 30 530 25 HOH HOH . 
Q 5 HOH B 31 531 67 HOH HOH . 
Q 5 HOH B 32 532 470 HOH HOH . 
Q 5 HOH B 33 533 479 HOH HOH . 
Q 5 HOH B 34 534 486 HOH HOH . 
R 5 HOH C 1 501 41 HOH HOH . 
R 5 HOH C 2 502 36 HOH HOH . 
R 5 HOH C 3 503 48 HOH HOH . 
R 5 HOH C 4 504 58 HOH HOH . 
R 5 HOH C 5 505 1 HOH HOH . 
R 5 HOH C 6 506 17 HOH HOH . 
R 5 HOH C 7 507 111 HOH HOH . 
R 5 HOH C 8 508 383 HOH HOH . 
R 5 HOH C 9 509 63 HOH HOH . 
R 5 HOH C 10 510 221 HOH HOH . 
R 5 HOH C 11 511 24 HOH HOH . 
R 5 HOH C 12 512 162 HOH HOH . 
R 5 HOH C 13 513 69 HOH HOH . 
R 5 HOH C 14 514 100 HOH HOH . 
R 5 HOH C 15 515 27 HOH HOH . 
R 5 HOH C 16 516 49 HOH HOH . 
R 5 HOH C 17 517 98 HOH HOH . 
R 5 HOH C 18 518 95 HOH HOH . 
R 5 HOH C 19 519 9 HOH HOH . 
R 5 HOH C 20 520 27 HOH HOH . 
R 5 HOH C 21 521 263 HOH HOH . 
R 5 HOH C 22 522 209 HOH HOH . 
R 5 HOH C 23 523 46 HOH HOH . 
R 5 HOH C 24 524 48 HOH HOH . 
R 5 HOH C 25 525 14 HOH HOH . 
R 5 HOH C 26 526 145 HOH HOH . 
R 5 HOH C 27 527 68 HOH HOH . 
R 5 HOH C 28 528 65 HOH HOH . 
R 5 HOH C 29 529 182 HOH HOH . 
R 5 HOH C 30 530 7 HOH HOH . 
R 5 HOH C 31 531 163 HOH HOH . 
R 5 HOH C 32 532 18 HOH HOH . 
R 5 HOH C 33 533 18 HOH HOH . 
R 5 HOH C 34 534 140 HOH HOH . 
R 5 HOH C 35 535 115 HOH HOH . 
R 5 HOH C 36 536 113 HOH HOH . 
R 5 HOH C 37 537 30 HOH HOH . 
R 5 HOH C 38 538 136 HOH HOH . 
R 5 HOH C 39 539 137 HOH HOH . 
R 5 HOH C 40 540 216 HOH HOH . 
R 5 HOH C 41 541 71 HOH HOH . 
R 5 HOH C 42 542 70 HOH HOH . 
R 5 HOH C 43 543 158 HOH HOH . 
R 5 HOH C 44 544 73 HOH HOH . 
R 5 HOH C 45 545 4 HOH HOH . 
R 5 HOH C 46 546 37 HOH HOH . 
R 5 HOH C 47 547 52 HOH HOH . 
R 5 HOH C 48 548 61 HOH HOH . 
R 5 HOH C 49 549 42 HOH HOH . 
R 5 HOH C 50 550 467 HOH HOH . 
R 5 HOH C 51 551 490 HOH HOH . 
R 5 HOH C 52 552 472 HOH HOH . 
S 5 HOH D 1 501 32 HOH HOH . 
S 5 HOH D 2 502 53 HOH HOH . 
S 5 HOH D 3 503 65 HOH HOH . 
S 5 HOH D 4 504 66 HOH HOH . 
S 5 HOH D 5 505 44 HOH HOH . 
S 5 HOH D 6 506 33 HOH HOH . 
S 5 HOH D 7 507 34 HOH HOH . 
S 5 HOH D 8 508 21 HOH HOH . 
S 5 HOH D 9 509 16 HOH HOH . 
S 5 HOH D 10 510 29 HOH HOH . 
S 5 HOH D 11 511 15 HOH HOH . 
S 5 HOH D 12 512 93 HOH HOH . 
S 5 HOH D 13 513 55 HOH HOH . 
S 5 HOH D 14 514 86 HOH HOH . 
S 5 HOH D 15 515 207 HOH HOH . 
S 5 HOH D 16 516 156 HOH HOH . 
S 5 HOH D 17 517 40 HOH HOH . 
S 5 HOH D 18 518 62 HOH HOH . 
S 5 HOH D 19 519 4 HOH HOH . 
S 5 HOH D 20 520 439 HOH HOH . 
S 5 HOH D 21 521 8 HOH HOH . 
S 5 HOH D 22 522 101 HOH HOH . 
S 5 HOH D 23 523 218 HOH HOH . 
S 5 HOH D 24 524 43 HOH HOH . 
S 5 HOH D 25 525 60 HOH HOH . 
S 5 HOH D 26 526 205 HOH HOH . 
S 5 HOH D 27 527 16 HOH HOH . 
S 5 HOH D 28 528 3 HOH HOH . 
S 5 HOH D 29 529 323 HOH HOH . 
S 5 HOH D 30 530 122 HOH HOH . 
S 5 HOH D 31 531 41 HOH HOH . 
S 5 HOH D 32 532 71 HOH HOH . 
S 5 HOH D 33 533 64 HOH HOH . 
S 5 HOH D 34 534 232 HOH HOH . 
S 5 HOH D 35 535 53 HOH HOH . 
S 5 HOH D 36 536 50 HOH HOH . 
S 5 HOH D 37 537 303 HOH HOH . 
S 5 HOH D 38 538 165 HOH HOH . 
S 5 HOH D 39 539 320 HOH HOH . 
S 5 HOH D 40 540 279 HOH HOH . 
S 5 HOH D 41 541 307 HOH HOH . 
S 5 HOH D 42 542 11 HOH HOH . 
S 5 HOH D 43 543 9 HOH HOH . 
S 5 HOH D 44 544 120 HOH HOH . 
S 5 HOH D 45 545 174 HOH HOH . 
S 5 HOH D 46 546 89 HOH HOH . 
S 5 HOH D 47 547 26 HOH HOH . 
S 5 HOH D 48 548 112 HOH HOH . 
S 5 HOH D 49 549 40 HOH HOH . 
S 5 HOH D 50 550 475 HOH HOH . 
S 5 HOH D 51 551 478 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 EA7 . . . F 3 31.217 6.626 15.951 1 48.74 ? C4 EA7 402 A 1 
HETATM 2 C C14 EA7 . . . F 3 31.578 8.387 12.546 1 52.76 ? C14 EA7 402 A 1 
HETATM 3 C C5 EA7 . . . F 3 29.103 3.933 12.611 1 45.65 ? C5 EA7 402 A 1 
HETATM 4 C C6 EA7 . . . F 3 30.014 5.927 11.912 1 48.24 ? C6 EA7 402 A 1 
HETATM 5 C C11 EA7 . . . F 3 26.088 0.133 13.231 1 48.63 ? C11 EA7 402 A 1 
HETATM 6 C C7 EA7 . . . F 3 27.759 1.834 13.097 1 46.61 ? C7 EA7 402 A 1 
HETATM 7 C C8 EA7 . . . F 3 28.135 1.55 14.414 1 47.1 ? C8 EA7 402 A 1 
HETATM 8 C C9 EA7 . . . F 3 27.462 0.573 15.113 1 46.96 ? C9 EA7 402 A 1 
HETATM 9 C C10 EA7 . . . F 3 26.431 -0.16 14.548 1 48.82 ? C10 EA7 402 A 1 
HETATM 10 C C12 EA7 . . . F 3 26.727 1.11 12.506 1 47.35 ? C12 EA7 402 A 1 
HETATM 11 C C13 EA7 . . . F 3 30.197 7.239 16.897 1 46.79 ? C13 EA7 402 A 1 
HETATM 12 N N1 EA7 . . . F 3 30.718 5.309 15.481 1 47.93 ? N1 EA7 402 A 1 
HETATM 13 N N2 EA7 . . . F 3 31.267 7.355 13.555 1 51.47 ? N2 EA7 402 A 1 
HETATM 14 C C3 EA7 . . . F 3 31.614 7.615 14.86 1 49.62 ? C3 EA7 402 A 1 
HETATM 15 N N3 EA7 . . . F 3 29.564 4.059 13.869 1 46.88 ? N3 EA7 402 A 1 
HETATM 16 C C1 EA7 . . . F 3 30.273 5.163 14.178 1 49.1 ? C1 EA7 402 A 1 
HETATM 17 C C2 EA7 . . . F 3 30.542 6.172 13.199 1 49.56 ? C2 EA7 402 A 1 
HETATM 18 N N4 EA7 . . . F 3 29.307 4.835 11.628 1 45.42 ? N4 EA7 402 A 1 
HETATM 19 N N5 EA7 . . . F 3 28.39 2.814 12.286 1 45.17 ? N5 EA7 402 A 1 
HETATM 20 O O1 EA7 . . . F 3 32.208 8.643 15.167 1 48.97 ? O1 EA7 402 A 1 
HETATM 21 C C15 EA7 . . . F 3 32.823 8.189 11.789 1 53.53 ? C15 EA7 402 A 1 
HETATM 22 C C16 EA7 . . . F 3 33.754 8.035 11.073 1 52.46 ? C16 EA7 402 A 1 
HETATM 23 C C17 EA7 . . . F 3 30.662 4.201 16.439 1 45.76 ? C17 EA7 402 A 1 
HETATM 24 F F1 EA7 . . . F 3 25.092 -0.556 12.632 1 47.88 ? F1 EA7 402 A 1 
HETATM 25 O O2 EA7 . . . F 3 25.808 -1.117 15.298 1 47.43 ? O2 EA7 402 A 1 
HETATM 26 F F2 EA7 . . . F 3 27.818 0.304 16.39 1 47.93 ? F2 EA7 402 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           26 
#