data_6CGC
#
_model_server_result.job_id            GgPTKWBIjurk7ahaZLoTHg 
_model_server_result.datetime_utc      '2024-11-18 00:36:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6cgc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    6CGC 
#
_exptl.entry_id    6CGC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6CGC 
_cell.length_a            41.75 
_cell.length_b            107.98 
_cell.length_c            115.72 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CGC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 306 n n 
PA O2A NAP sing 307 n n 
PA O5B NAP sing 308 n n 
PA O3 NAP sing 309 n n 
O2A HOA2 NAP sing 310 n n 
O5B C5B NAP sing 311 n n 
C5B C4B NAP sing 312 n n 
C5B H51A NAP sing 313 n n 
C5B H52A NAP sing 314 n n 
C4B O4B NAP sing 315 n n 
C4B C3B NAP sing 316 n n 
C4B H4B NAP sing 317 n n 
O4B C1B NAP sing 318 n n 
C3B O3B NAP sing 319 n n 
C3B C2B NAP sing 320 n n 
C3B H3B NAP sing 321 n n 
O3B HO3A NAP sing 322 n n 
C2B O2B NAP sing 323 n n 
C2B C1B NAP sing 324 n n 
C2B H2B NAP sing 325 n n 
O2B P2B NAP sing 326 n n 
C1B N9A NAP sing 327 n n 
C1B H1B NAP sing 328 n n 
N9A C8A NAP sing 329 n y 
N9A C4A NAP sing 330 n y 
C8A N7A NAP doub 331 n y 
C8A H8A NAP sing 332 n n 
N7A C5A NAP sing 333 n y 
C5A C6A NAP sing 334 n y 
C5A C4A NAP doub 335 n y 
C6A N6A NAP sing 336 n n 
C6A N1A NAP doub 337 n y 
N6A H61A NAP sing 338 n n 
N6A H62A NAP sing 339 n n 
N1A C2A NAP sing 340 n y 
C2A N3A NAP doub 341 n y 
C2A H2A NAP sing 342 n n 
N3A C4A NAP sing 343 n y 
O3 PN NAP sing 344 n n 
PN O1N NAP doub 345 n n 
PN O2N NAP sing 346 n n 
PN O5D NAP sing 347 n n 
O5D C5D NAP sing 348 n n 
C5D C4D NAP sing 349 n n 
C5D H51N NAP sing 350 n n 
C5D H52N NAP sing 351 n n 
C4D O4D NAP sing 352 n n 
C4D C3D NAP sing 353 n n 
C4D H4D NAP sing 354 n n 
O4D C1D NAP sing 355 n n 
C3D O3D NAP sing 356 n n 
C3D C2D NAP sing 357 n n 
C3D H3D NAP sing 358 n n 
O3D HO3N NAP sing 359 n n 
C2D O2D NAP sing 360 n n 
C2D C1D NAP sing 361 n n 
C2D H2D NAP sing 362 n n 
O2D HO2N NAP sing 363 n n 
C1D N1N NAP sing 364 n n 
C1D H1D NAP sing 365 n n 
N1N C2N NAP sing 366 n y 
N1N C6N NAP doub 367 n y 
C2N C3N NAP doub 368 n y 
C2N H2N NAP sing 369 n n 
C3N C7N NAP sing 370 n n 
C3N C4N NAP sing 371 n y 
C7N O7N NAP doub 372 n n 
C7N N7N NAP sing 373 n n 
N7N H71N NAP sing 374 n n 
N7N H72N NAP sing 375 n n 
C4N C5N NAP doub 376 n y 
C4N H4N NAP sing 377 n n 
C5N C6N NAP sing 378 n y 
C5N H5N NAP sing 379 n n 
C6N H6N NAP sing 380 n n 
P2B O1X NAP doub 381 n n 
P2B O2X NAP sing 382 n n 
P2B O3X NAP sing 383 n n 
O2X HOP2 NAP sing 384 n n 
O3X HOP3 NAP sing 385 n n 
#
_atom_sites.entry_id                     6CGC 
_atom_sites.fract_transf_matrix[1][1]    0.023952 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009261 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008642 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 401 2 NAP NAP . 
D 3 F0A A 1 402 1 F0A E3B . 
E 2 NAP B 1 401 1 NAP NAP . 
F 3 F0A B 1 402 2 F0A E3B . 
G 4 HOH A 1 501 19 HOH HOH . 
G 4 HOH A 2 502 7 HOH HOH . 
G 4 HOH A 3 503 12 HOH HOH . 
G 4 HOH A 4 504 10 HOH HOH . 
G 4 HOH A 5 505 2 HOH HOH . 
G 4 HOH A 6 506 29 HOH HOH . 
G 4 HOH A 7 507 31 HOH HOH . 
G 4 HOH A 8 508 20 HOH HOH . 
G 4 HOH A 9 509 4 HOH HOH . 
G 4 HOH A 10 510 28 HOH HOH . 
G 4 HOH A 11 511 27 HOH HOH . 
G 4 HOH A 12 512 11 HOH HOH . 
G 4 HOH A 13 513 14 HOH HOH . 
G 4 HOH A 14 514 8 HOH HOH . 
G 4 HOH A 15 515 24 HOH HOH . 
G 4 HOH A 16 516 1 HOH HOH . 
G 4 HOH A 17 517 9 HOH HOH . 
G 4 HOH A 18 518 30 HOH HOH . 
G 4 HOH A 19 519 21 HOH HOH . 
G 4 HOH A 20 520 13 HOH HOH . 
G 4 HOH A 21 521 22 HOH HOH . 
G 4 HOH A 22 522 16 HOH HOH . 
G 4 HOH A 23 523 15 HOH HOH . 
H 4 HOH B 1 501 26 HOH HOH . 
H 4 HOH B 2 502 3 HOH HOH . 
H 4 HOH B 3 503 18 HOH HOH . 
H 4 HOH B 4 504 33 HOH HOH . 
H 4 HOH B 5 505 32 HOH HOH . 
H 4 HOH B 6 506 17 HOH HOH . 
H 4 HOH B 7 507 23 HOH HOH . 
H 4 HOH B 8 508 6 HOH HOH . 
H 4 HOH B 9 509 25 HOH HOH . 
H 4 HOH B 10 510 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . E 2 11.243 -14.246 25.127 1 112.54 ? PA NAP 401 B 1 
HETATM 2 O O1A NAP . . . E 2 10.821 -12.808 25.351 1 106.19 ? O1A NAP 401 B 1 
HETATM 3 O O2A NAP . . . E 2 12.635 -14.637 25.607 1 105.38 ? O2A NAP 401 B 1 
HETATM 4 O O5B NAP . . . E 2 11.191 -14.504 23.518 1 88.6 ? O5B NAP 401 B 1 
HETATM 5 C C5B NAP . . . E 2 10.229 -15.298 22.794 1 67.07 ? C5B NAP 401 B 1 
HETATM 6 C C4B NAP . . . E 2 10.915 -16.282 21.867 1 56.34 ? C4B NAP 401 B 1 
HETATM 7 O O4B NAP . . . E 2 11.496 -15.484 20.835 1 49.2 ? O4B NAP 401 B 1 
HETATM 8 C C3B NAP . . . E 2 12.016 -17.061 22.583 1 49.9 ? C3B NAP 401 B 1 
HETATM 9 O O3B NAP . . . E 2 12.023 -18.481 22.323 1 50.74 ? O3B NAP 401 B 1 
HETATM 10 C C2B NAP . . . E 2 13.249 -16.357 22.059 1 49.97 ? C2B NAP 401 B 1 
HETATM 11 O O2B NAP . . . E 2 14.422 -17.147 22.124 1 55.35 ? O2B NAP 401 B 1 
HETATM 12 C C1B NAP . . . E 2 12.814 -15.989 20.635 1 47.16 ? C1B NAP 401 B 1 
HETATM 13 N N9A NAP . . . E 2 13.817 -15.116 19.968 1 37.49 ? N9A NAP 401 B 1 
HETATM 14 C C8A NAP . . . E 2 14.309 -13.969 20.433 1 37.51 ? C8A NAP 401 B 1 
HETATM 15 N N7A NAP . . . E 2 15.235 -13.462 19.585 1 37.89 ? N7A NAP 401 B 1 
HETATM 16 C C5A NAP . . . E 2 15.374 -14.311 18.566 1 34.17 ? C5A NAP 401 B 1 
HETATM 17 C C6A NAP . . . E 2 16.218 -14.366 17.347 1 32.89 ? C6A NAP 401 B 1 
HETATM 18 N N6A NAP . . . E 2 17.075 -13.361 17.102 1 29.6 ? N6A NAP 401 B 1 
HETATM 19 N N1A NAP . . . E 2 16.054 -15.419 16.496 1 33.49 ? N1A NAP 401 B 1 
HETATM 20 C C2A NAP . . . E 2 15.139 -16.401 16.78 1 34.33 ? C2A NAP 401 B 1 
HETATM 21 N N3A NAP . . . E 2 14.346 -16.397 17.891 1 33.73 ? N3A NAP 401 B 1 
HETATM 22 C C4A NAP . . . E 2 14.419 -15.398 18.812 1 36.07 ? C4A NAP 401 B 1 
HETATM 23 O O3 NAP . . . E 2 10.135 -15.246 25.805 1 112.9 ? O3 NAP 401 B 1 
HETATM 24 P PN NAP . . . E 2 8.504 -15.129 25.706 1 121.95 ? PN NAP 401 B 1 
HETATM 25 O O1N NAP . . . E 2 8.149 -13.995 24.767 1 123.05 ? O1N NAP 401 B 1 
HETATM 26 O O2N NAP . . . E 2 7.912 -16.493 25.422 1 114.54 ? O2N NAP 401 B 1 
HETATM 27 O O5D NAP . . . E 2 8.021 -14.723 27.192 1 127.08 ? O5D NAP 401 B 1 
HETATM 28 P P2B NAP . . . E 2 15.587 -17.023 23.266 1 66.56 ? P2B NAP 401 B 1 
HETATM 29 O O1X NAP . . . E 2 16.528 -15.894 22.877 1 57.6 ? O1X NAP 401 B 1 
HETATM 30 O O2X NAP . . . E 2 14.959 -16.847 24.646 1 58.02 ? O2X NAP 401 B 1 
HETATM 31 O O3X NAP . . . E 2 16.168 -18.398 23.04 1 66.87 ? O3X NAP 401 B 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           31 
#