data_6CGE
#
_model_server_result.job_id            Iu1mvHMU4_SnyOjQ-_tiwQ 
_model_server_result.datetime_utc      '2024-11-18 00:37:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6cge 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    6CGE 
#
_exptl.entry_id    6CGE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              496.479 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-{[(14beta,16alpha,17alpha)-3-(2-bromoethyl)-17-hydroxyestra-1,3,5(10)-trien-16-yl]methyl}benzamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6CGE 
_cell.length_a            42.82 
_cell.length_b            108.94 
_cell.length_c            116.36 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CGE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 222 A HIS 221 1_555 D C31 F0D . A F0D 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? 
covale ? covale2 B NE2 HIS 222 B HIS 221 1_555 F C31 F0D . B F0D 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.294 ? 
#
_chem_comp.formula           'C28 H34 Br N O2' 
_chem_comp.formula_weight    496.479 
_chem_comp.id                F0D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-{[(14beta,16alpha,17alpha)-3-(2-bromoethyl)-17-hydroxyestra-1,3,5(10)-trien-16-yl]methyl}benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C31 C30 F0D sing 83 n n 
C30 C3 F0D sing 84 n n 
C5 C3 F0D doub 85 n y 
C5 C6 F0D sing 86 n y 
C3 C2 F0D sing 87 n y 
C7 C6 F0D sing 88 n n 
C7 C8 F0D sing 89 n n 
C6 C11 F0D doub 90 n y 
C2 C1 F0D doub 91 n y 
C8 C9 F0D sing 92 n n 
C11 C1 F0D sing 93 n y 
C11 C10 F0D sing 94 n n 
C10 C9 F0D sing 95 n n 
C10 C12 F0D sing 96 n n 
C9 C15 F0D sing 97 n n 
C15 C16 F0D sing 98 n n 
C15 C14 F0D sing 99 n n 
C16 C17 F0D sing 100 n n 
C12 C13 F0D sing 101 n n 
C26 C25 F0D doub 102 n y 
C26 C27 F0D sing 103 n y 
C25 C24 F0D sing 104 n y 
C13 C14 F0D sing 105 n n 
C17 C18 F0D sing 106 n n 
C17 C21 F0D sing 107 n n 
C14 C18 F0D sing 108 n n 
C14 C20 F0D sing 109 n n 
C27 C22 F0D doub 110 n y 
O29 C28 F0D doub 111 n n 
C24 C28 F0D sing 112 n n 
C24 C23 F0D doub 113 n y 
C28 N30 F0D sing 114 n n 
C18 O19 F0D sing 115 n n 
C22 C23 F0D sing 116 n y 
C22 C21 F0D sing 117 n n 
C1 H1 F0D sing 118 n n 
C2 H2 F0D sing 119 n n 
C31 H3 F0D sing 120 n n 
C31 H4 F0D sing 121 n n 
C30 H6 F0D sing 122 n n 
C30 H7 F0D sing 123 n n 
C5 H8 F0D sing 124 n n 
C7 H9 F0D sing 125 n n 
C7 H10 F0D sing 126 n n 
C8 H11 F0D sing 127 n n 
C8 H12 F0D sing 128 n n 
C9 H13 F0D sing 129 n n 
C10 H14 F0D sing 130 n n 
C12 H15 F0D sing 131 n n 
C12 H16 F0D sing 132 n n 
C13 H17 F0D sing 133 n n 
C13 H18 F0D sing 134 n n 
C20 H19 F0D sing 135 n n 
C20 H20 F0D sing 136 n n 
C20 H21 F0D sing 137 n n 
C15 H22 F0D sing 138 n n 
C16 H23 F0D sing 139 n n 
C16 H24 F0D sing 140 n n 
C18 H25 F0D sing 141 n n 
O19 H26 F0D sing 142 n n 
C17 H27 F0D sing 143 n n 
C21 H28 F0D sing 144 n n 
C21 H29 F0D sing 145 n n 
C23 H30 F0D sing 146 n n 
C27 H31 F0D sing 147 n n 
C26 H32 F0D sing 148 n n 
C25 H33 F0D sing 149 n n 
N30 H34 F0D sing 150 n n 
N30 H35 F0D sing 151 n n 
C31 BR1 F0D sing 152 n n 
#
_atom_sites.entry_id                     6CGE 
_atom_sites.fract_transf_matrix[1][1]    0.023354 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009179 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008594 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 401 2 NAP NAP . 
D 3 F0D A 1 402 2 F0D BRM . 
E 2 NAP B 1 401 1 NAP NAP . 
F 3 F0D B 1 402 1 F0D BRM . 
G 4 HOH A 1 501 6 HOH HOH . 
G 4 HOH A 2 502 11 HOH HOH . 
G 4 HOH A 3 503 12 HOH HOH . 
G 4 HOH A 4 504 7 HOH HOH . 
G 4 HOH A 5 505 1 HOH HOH . 
G 4 HOH A 6 506 4 HOH HOH . 
G 4 HOH A 7 507 5 HOH HOH . 
G 4 HOH A 8 508 25 HOH HOH . 
G 4 HOH A 9 509 9 HOH HOH . 
G 4 HOH A 10 510 10 HOH HOH . 
G 4 HOH A 11 511 27 HOH HOH . 
G 4 HOH A 12 512 2 HOH HOH . 
H 4 HOH B 1 501 8 HOH HOH . 
H 4 HOH B 2 502 17 HOH HOH . 
H 4 HOH B 3 503 23 HOH HOH . 
H 4 HOH B 4 504 20 HOH HOH . 
H 4 HOH B 5 505 16 HOH HOH . 
H 4 HOH B 6 506 22 HOH HOH . 
H 4 HOH B 7 507 13 HOH HOH . 
H 4 HOH B 8 508 14 HOH HOH . 
H 4 HOH B 9 509 18 HOH HOH . 
H 4 HOH B 10 510 21 HOH HOH . 
H 4 HOH B 11 511 19 HOH HOH . 
H 4 HOH B 12 512 3 HOH HOH . 
H 4 HOH B 13 513 24 HOH HOH . 
H 4 HOH B 14 514 26 HOH HOH . 
H 4 HOH B 15 515 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 F0D . . . D 3 -28.506 -2.825 1.952 1 59.36 ? C1 F0D 402 A 1 
HETATM 2 C C2 F0D . . . D 3 -29.272 -1.909 2.685 1 58.29 ? C2 F0D 402 A 1 
HETATM 3 C C31 F0D . . . D 3 -29.751 -0.655 6.058 1 62.24 ? C31 F0D 402 A 1 
HETATM 4 C C30 F0D . . . D 3 -29.558 -0.222 4.571 1 61.17 ? C30 F0D 402 A 1 
HETATM 5 C C3 F0D . . . D 3 -28.728 -1.201 3.764 1 59.69 ? C3 F0D 402 A 1 
HETATM 6 C C5 F0D . . . D 3 -27.399 -1.387 4.115 1 62.05 ? C5 F0D 402 A 1 
HETATM 7 C C6 F0D . . . D 3 -26.597 -2.286 3.421 1 60.12 ? C6 F0D 402 A 1 
HETATM 8 C C7 F0D . . . D 3 -25.169 -2.426 3.885 1 58.36 ? C7 F0D 402 A 1 
HETATM 9 C C8 F0D . . . D 3 -24.468 -3.623 3.265 1 56.21 ? C8 F0D 402 A 1 
HETATM 10 C C9 F0D . . . D 3 -24.781 -3.791 1.784 1 55.74 ? C9 F0D 402 A 1 
HETATM 11 C C11 F0D . . . D 3 -27.151 -3.042 2.257 1 60.01 ? C11 F0D 402 A 1 
HETATM 12 C C10 F0D . . . D 3 -26.282 -4.044 1.549 1 56.28 ? C10 F0D 402 A 1 
HETATM 13 C C12 F0D . . . D 3 -26.579 -4.258 0.056 1 57.8 ? C12 F0D 402 A 1 
HETATM 14 C C13 F0D . . . D 3 -25.722 -5.422 -0.476 1 57.79 ? C13 F0D 402 A 1 
HETATM 15 C C14 F0D . . . D 3 -24.222 -5.239 -0.251 1 56.02 ? C14 F0D 402 A 1 
HETATM 16 C C20 F0D . . . D 3 -23.679 -4.167 -1.201 1 61.08 ? C20 F0D 402 A 1 
HETATM 17 C C15 F0D . . . D 3 -23.974 -4.971 1.226 1 54.98 ? C15 F0D 402 A 1 
HETATM 18 C C16 F0D . . . D 3 -22.442 -5.032 1.363 1 53.12 ? C16 F0D 402 A 1 
HETATM 19 C C18 F0D . . . D 3 -23.339 -6.474 -0.402 1 56.6 ? C18 F0D 402 A 1 
HETATM 20 O O19 F0D . . . D 3 -23.217 -6.889 -1.767 1 56.59 ? O19 F0D 402 A 1 
HETATM 21 C C17 F0D . . . D 3 -22.035 -6.122 0.357 1 54.62 ? C17 F0D 402 A 1 
HETATM 22 C C21 F0D . . . D 3 -20.819 -5.705 -0.502 1 52.9 ? C21 F0D 402 A 1 
HETATM 23 C C22 F0D . . . D 3 -19.51 -5.722 0.273 1 53.02 ? C22 F0D 402 A 1 
HETATM 24 C C23 F0D . . . D 3 -18.658 -4.605 0.24 1 52.23 ? C23 F0D 402 A 1 
HETATM 25 C C27 F0D . . . D 3 -19.11 -6.845 1.013 1 51.78 ? C27 F0D 402 A 1 
HETATM 26 C C26 F0D . . . D 3 -17.906 -6.841 1.713 1 49.47 ? C26 F0D 402 A 1 
HETATM 27 C C25 F0D . . . D 3 -17.073 -5.719 1.688 1 50.75 ? C25 F0D 402 A 1 
HETATM 28 C C24 F0D . . . D 3 -17.436 -4.591 0.946 1 47.26 ? C24 F0D 402 A 1 
HETATM 29 C C28 F0D . . . D 3 -16.507 -3.407 0.937 1 43.41 ? C28 F0D 402 A 1 
HETATM 30 O O29 F0D . . . D 3 -15.312 -3.535 1.232 1 41.96 ? O29 F0D 402 A 1 
HETATM 31 N N30 F0D . . . D 3 -16.986 -2.206 0.617 1 40.99 ? N30 F0D 402 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           31 
#