data_6CGM # _model_server_result.job_id l3wOWA3Jb_ZzoBhGsws_MQ _model_server_result.datetime_utc '2024-11-07 00:28:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cgm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 6CGM # _exptl.entry_id 6CGM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CGM _cell.length_a 72.855 _cell.length_b 72.855 _cell.length_c 296.142 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6CGM _atom_sites.fract_transf_matrix[1][1] 0.013726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013726 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 801 1 EDO EDO . C 2 EDO A 1 802 2 EDO EDO . D 2 EDO A 1 803 3 EDO EDO . E 3 HOH A 1 901 155 HOH HOH . E 3 HOH A 2 902 213 HOH HOH . E 3 HOH A 3 903 175 HOH HOH . E 3 HOH A 4 904 116 HOH HOH . E 3 HOH A 5 905 259 HOH HOH . E 3 HOH A 6 906 26 HOH HOH . E 3 HOH A 7 907 33 HOH HOH . E 3 HOH A 8 908 46 HOH HOH . E 3 HOH A 9 909 284 HOH HOH . E 3 HOH A 10 910 266 HOH HOH . E 3 HOH A 11 911 298 HOH HOH . E 3 HOH A 12 912 40 HOH HOH . E 3 HOH A 13 913 238 HOH HOH . E 3 HOH A 14 914 59 HOH HOH . E 3 HOH A 15 915 184 HOH HOH . E 3 HOH A 16 916 349 HOH HOH . E 3 HOH A 17 917 290 HOH HOH . E 3 HOH A 18 918 314 HOH HOH . E 3 HOH A 19 919 103 HOH HOH . E 3 HOH A 20 920 161 HOH HOH . E 3 HOH A 21 921 209 HOH HOH . E 3 HOH A 22 922 159 HOH HOH . E 3 HOH A 23 923 114 HOH HOH . E 3 HOH A 24 924 11 HOH HOH . E 3 HOH A 25 925 44 HOH HOH . E 3 HOH A 26 926 73 HOH HOH . E 3 HOH A 27 927 346 HOH HOH . E 3 HOH A 28 928 100 HOH HOH . E 3 HOH A 29 929 242 HOH HOH . E 3 HOH A 30 930 92 HOH HOH . E 3 HOH A 31 931 105 HOH HOH . E 3 HOH A 32 932 28 HOH HOH . E 3 HOH A 33 933 234 HOH HOH . E 3 HOH A 34 934 88 HOH HOH . E 3 HOH A 35 935 241 HOH HOH . E 3 HOH A 36 936 272 HOH HOH . E 3 HOH A 37 937 134 HOH HOH . E 3 HOH A 38 938 85 HOH HOH . E 3 HOH A 39 939 178 HOH HOH . E 3 HOH A 40 940 366 HOH HOH . E 3 HOH A 41 941 367 HOH HOH . E 3 HOH A 42 942 250 HOH HOH . E 3 HOH A 43 943 91 HOH HOH . E 3 HOH A 44 944 142 HOH HOH . E 3 HOH A 45 945 54 HOH HOH . E 3 HOH A 46 946 162 HOH HOH . E 3 HOH A 47 947 61 HOH HOH . E 3 HOH A 48 948 189 HOH HOH . E 3 HOH A 49 949 282 HOH HOH . E 3 HOH A 50 950 254 HOH HOH . E 3 HOH A 51 951 207 HOH HOH . E 3 HOH A 52 952 30 HOH HOH . E 3 HOH A 53 953 137 HOH HOH . E 3 HOH A 54 954 125 HOH HOH . E 3 HOH A 55 955 354 HOH HOH . E 3 HOH A 56 956 87 HOH HOH . E 3 HOH A 57 957 320 HOH HOH . E 3 HOH A 58 958 316 HOH HOH . E 3 HOH A 59 959 243 HOH HOH . E 3 HOH A 60 960 12 HOH HOH . E 3 HOH A 61 961 32 HOH HOH . E 3 HOH A 62 962 200 HOH HOH . E 3 HOH A 63 963 219 HOH HOH . E 3 HOH A 64 964 136 HOH HOH . E 3 HOH A 65 965 341 HOH HOH . E 3 HOH A 66 966 194 HOH HOH . E 3 HOH A 67 967 16 HOH HOH . E 3 HOH A 68 968 71 HOH HOH . E 3 HOH A 69 969 82 HOH HOH . E 3 HOH A 70 970 174 HOH HOH . E 3 HOH A 71 971 77 HOH HOH . E 3 HOH A 72 972 261 HOH HOH . E 3 HOH A 73 973 76 HOH HOH . E 3 HOH A 74 974 244 HOH HOH . E 3 HOH A 75 975 353 HOH HOH . E 3 HOH A 76 976 247 HOH HOH . E 3 HOH A 77 977 280 HOH HOH . E 3 HOH A 78 978 10 HOH HOH . E 3 HOH A 79 979 206 HOH HOH . E 3 HOH A 80 980 236 HOH HOH . E 3 HOH A 81 981 233 HOH HOH . E 3 HOH A 82 982 130 HOH HOH . E 3 HOH A 83 983 111 HOH HOH . E 3 HOH A 84 984 191 HOH HOH . E 3 HOH A 85 985 363 HOH HOH . E 3 HOH A 86 986 70 HOH HOH . E 3 HOH A 87 987 333 HOH HOH . E 3 HOH A 88 988 52 HOH HOH . E 3 HOH A 89 989 347 HOH HOH . E 3 HOH A 90 990 318 HOH HOH . E 3 HOH A 91 991 345 HOH HOH . E 3 HOH A 92 992 257 HOH HOH . E 3 HOH A 93 993 139 HOH HOH . E 3 HOH A 94 994 117 HOH HOH . E 3 HOH A 95 995 38 HOH HOH . E 3 HOH A 96 996 292 HOH HOH . E 3 HOH A 97 997 289 HOH HOH . E 3 HOH A 98 998 68 HOH HOH . E 3 HOH A 99 999 167 HOH HOH . E 3 HOH A 100 1000 171 HOH HOH . E 3 HOH A 101 1001 229 HOH HOH . E 3 HOH A 102 1002 21 HOH HOH . E 3 HOH A 103 1003 8 HOH HOH . E 3 HOH A 104 1004 310 HOH HOH . E 3 HOH A 105 1005 248 HOH HOH . E 3 HOH A 106 1006 198 HOH HOH . E 3 HOH A 107 1007 253 HOH HOH . E 3 HOH A 108 1008 81 HOH HOH . E 3 HOH A 109 1009 60 HOH HOH . E 3 HOH A 110 1010 360 HOH HOH . E 3 HOH A 111 1011 24 HOH HOH . E 3 HOH A 112 1012 95 HOH HOH . E 3 HOH A 113 1013 336 HOH HOH . E 3 HOH A 114 1014 6 HOH HOH . E 3 HOH A 115 1015 201 HOH HOH . E 3 HOH A 116 1016 277 HOH HOH . E 3 HOH A 117 1017 321 HOH HOH . E 3 HOH A 118 1018 13 HOH HOH . E 3 HOH A 119 1019 181 HOH HOH . E 3 HOH A 120 1020 110 HOH HOH . E 3 HOH A 121 1021 99 HOH HOH . E 3 HOH A 122 1022 64 HOH HOH . E 3 HOH A 123 1023 188 HOH HOH . E 3 HOH A 124 1024 122 HOH HOH . E 3 HOH A 125 1025 80 HOH HOH . E 3 HOH A 126 1026 14 HOH HOH . E 3 HOH A 127 1027 195 HOH HOH . E 3 HOH A 128 1028 29 HOH HOH . E 3 HOH A 129 1029 150 HOH HOH . E 3 HOH A 130 1030 3 HOH HOH . E 3 HOH A 131 1031 223 HOH HOH . E 3 HOH A 132 1032 41 HOH HOH . E 3 HOH A 133 1033 199 HOH HOH . E 3 HOH A 134 1034 231 HOH HOH . E 3 HOH A 135 1035 74 HOH HOH . E 3 HOH A 136 1036 260 HOH HOH . E 3 HOH A 137 1037 58 HOH HOH . E 3 HOH A 138 1038 37 HOH HOH . E 3 HOH A 139 1039 96 HOH HOH . E 3 HOH A 140 1040 17 HOH HOH . E 3 HOH A 141 1041 222 HOH HOH . E 3 HOH A 142 1042 19 HOH HOH . E 3 HOH A 143 1043 281 HOH HOH . E 3 HOH A 144 1044 176 HOH HOH . E 3 HOH A 145 1045 338 HOH HOH . E 3 HOH A 146 1046 215 HOH HOH . E 3 HOH A 147 1047 331 HOH HOH . E 3 HOH A 148 1048 156 HOH HOH . E 3 HOH A 149 1049 9 HOH HOH . E 3 HOH A 150 1050 79 HOH HOH . E 3 HOH A 151 1051 121 HOH HOH . E 3 HOH A 152 1052 352 HOH HOH . E 3 HOH A 153 1053 315 HOH HOH . E 3 HOH A 154 1054 72 HOH HOH . E 3 HOH A 155 1055 307 HOH HOH . E 3 HOH A 156 1056 106 HOH HOH . E 3 HOH A 157 1057 230 HOH HOH . E 3 HOH A 158 1058 69 HOH HOH . E 3 HOH A 159 1059 375 HOH HOH . E 3 HOH A 160 1060 225 HOH HOH . E 3 HOH A 161 1061 18 HOH HOH . E 3 HOH A 162 1062 278 HOH HOH . E 3 HOH A 163 1063 357 HOH HOH . E 3 HOH A 164 1064 36 HOH HOH . E 3 HOH A 165 1065 15 HOH HOH . E 3 HOH A 166 1066 164 HOH HOH . E 3 HOH A 167 1067 228 HOH HOH . E 3 HOH A 168 1068 190 HOH HOH . E 3 HOH A 169 1069 217 HOH HOH . E 3 HOH A 170 1070 123 HOH HOH . E 3 HOH A 171 1071 183 HOH HOH . E 3 HOH A 172 1072 53 HOH HOH . E 3 HOH A 173 1073 126 HOH HOH . E 3 HOH A 174 1074 48 HOH HOH . E 3 HOH A 175 1075 131 HOH HOH . E 3 HOH A 176 1076 135 HOH HOH . E 3 HOH A 177 1077 172 HOH HOH . E 3 HOH A 178 1078 43 HOH HOH . E 3 HOH A 179 1079 255 HOH HOH . E 3 HOH A 180 1080 42 HOH HOH . E 3 HOH A 181 1081 268 HOH HOH . E 3 HOH A 182 1082 140 HOH HOH . E 3 HOH A 183 1083 148 HOH HOH . E 3 HOH A 184 1084 65 HOH HOH . E 3 HOH A 185 1085 50 HOH HOH . E 3 HOH A 186 1086 45 HOH HOH . E 3 HOH A 187 1087 203 HOH HOH . E 3 HOH A 188 1088 66 HOH HOH . E 3 HOH A 189 1089 325 HOH HOH . E 3 HOH A 190 1090 57 HOH HOH . E 3 HOH A 191 1091 113 HOH HOH . E 3 HOH A 192 1092 177 HOH HOH . E 3 HOH A 193 1093 170 HOH HOH . E 3 HOH A 194 1094 94 HOH HOH . E 3 HOH A 195 1095 344 HOH HOH . E 3 HOH A 196 1096 327 HOH HOH . E 3 HOH A 197 1097 208 HOH HOH . E 3 HOH A 198 1098 25 HOH HOH . E 3 HOH A 199 1099 31 HOH HOH . E 3 HOH A 200 1100 2 HOH HOH . E 3 HOH A 201 1101 102 HOH HOH . E 3 HOH A 202 1102 291 HOH HOH . E 3 HOH A 203 1103 112 HOH HOH . E 3 HOH A 204 1104 374 HOH HOH . E 3 HOH A 205 1105 119 HOH HOH . E 3 HOH A 206 1106 343 HOH HOH . E 3 HOH A 207 1107 218 HOH HOH . E 3 HOH A 208 1108 34 HOH HOH . E 3 HOH A 209 1109 196 HOH HOH . E 3 HOH A 210 1110 306 HOH HOH . E 3 HOH A 211 1111 107 HOH HOH . E 3 HOH A 212 1112 118 HOH HOH . E 3 HOH A 213 1113 359 HOH HOH . E 3 HOH A 214 1114 5 HOH HOH . E 3 HOH A 215 1115 245 HOH HOH . E 3 HOH A 216 1116 124 HOH HOH . E 3 HOH A 217 1117 224 HOH HOH . E 3 HOH A 218 1118 216 HOH HOH . E 3 HOH A 219 1119 127 HOH HOH . E 3 HOH A 220 1120 362 HOH HOH . E 3 HOH A 221 1121 154 HOH HOH . E 3 HOH A 222 1122 27 HOH HOH . E 3 HOH A 223 1123 101 HOH HOH . E 3 HOH A 224 1124 22 HOH HOH . E 3 HOH A 225 1125 263 HOH HOH . E 3 HOH A 226 1126 328 HOH HOH . E 3 HOH A 227 1127 120 HOH HOH . E 3 HOH A 228 1128 143 HOH HOH . E 3 HOH A 229 1129 49 HOH HOH . E 3 HOH A 230 1130 62 HOH HOH . E 3 HOH A 231 1131 129 HOH HOH . E 3 HOH A 232 1132 158 HOH HOH . E 3 HOH A 233 1133 361 HOH HOH . E 3 HOH A 234 1134 348 HOH HOH . E 3 HOH A 235 1135 265 HOH HOH . E 3 HOH A 236 1136 322 HOH HOH . E 3 HOH A 237 1137 141 HOH HOH . E 3 HOH A 238 1138 84 HOH HOH . E 3 HOH A 239 1139 165 HOH HOH . E 3 HOH A 240 1140 144 HOH HOH . E 3 HOH A 241 1141 20 HOH HOH . E 3 HOH A 242 1142 108 HOH HOH . E 3 HOH A 243 1143 332 HOH HOH . E 3 HOH A 244 1144 115 HOH HOH . E 3 HOH A 245 1145 168 HOH HOH . E 3 HOH A 246 1146 205 HOH HOH . E 3 HOH A 247 1147 264 HOH HOH . E 3 HOH A 248 1148 86 HOH HOH . E 3 HOH A 249 1149 56 HOH HOH . E 3 HOH A 250 1150 335 HOH HOH . E 3 HOH A 251 1151 227 HOH HOH . E 3 HOH A 252 1152 128 HOH HOH . E 3 HOH A 253 1153 7 HOH HOH . E 3 HOH A 254 1154 285 HOH HOH . E 3 HOH A 255 1155 296 HOH HOH . E 3 HOH A 256 1156 212 HOH HOH . E 3 HOH A 257 1157 269 HOH HOH . E 3 HOH A 258 1158 197 HOH HOH . E 3 HOH A 259 1159 287 HOH HOH . E 3 HOH A 260 1160 192 HOH HOH . E 3 HOH A 261 1161 193 HOH HOH . E 3 HOH A 262 1162 239 HOH HOH . E 3 HOH A 263 1163 279 HOH HOH . E 3 HOH A 264 1164 104 HOH HOH . E 3 HOH A 265 1165 240 HOH HOH . E 3 HOH A 266 1166 270 HOH HOH . E 3 HOH A 267 1167 109 HOH HOH . E 3 HOH A 268 1168 295 HOH HOH . E 3 HOH A 269 1169 262 HOH HOH . E 3 HOH A 270 1170 93 HOH HOH . E 3 HOH A 271 1171 378 HOH HOH . E 3 HOH A 272 1172 157 HOH HOH . E 3 HOH A 273 1173 35 HOH HOH . E 3 HOH A 274 1174 317 HOH HOH . E 3 HOH A 275 1175 324 HOH HOH . E 3 HOH A 276 1176 350 HOH HOH . E 3 HOH A 277 1177 329 HOH HOH . E 3 HOH A 278 1178 147 HOH HOH . E 3 HOH A 279 1179 342 HOH HOH . E 3 HOH A 280 1180 365 HOH HOH . E 3 HOH A 281 1181 221 HOH HOH . E 3 HOH A 282 1182 78 HOH HOH . E 3 HOH A 283 1183 220 HOH HOH . E 3 HOH A 284 1184 256 HOH HOH . E 3 HOH A 285 1185 311 HOH HOH . E 3 HOH A 286 1186 163 HOH HOH . E 3 HOH A 287 1187 202 HOH HOH . E 3 HOH A 288 1188 337 HOH HOH . E 3 HOH A 289 1189 226 HOH HOH . E 3 HOH A 290 1190 182 HOH HOH . E 3 HOH A 291 1191 309 HOH HOH . E 3 HOH A 292 1192 97 HOH HOH . E 3 HOH A 293 1193 351 HOH HOH . E 3 HOH A 294 1194 319 HOH HOH . E 3 HOH A 295 1195 364 HOH HOH . E 3 HOH A 296 1196 252 HOH HOH . E 3 HOH A 297 1197 271 HOH HOH . E 3 HOH A 298 1198 368 HOH HOH . E 3 HOH A 299 1199 235 HOH HOH . E 3 HOH A 300 1200 313 HOH HOH . E 3 HOH A 301 1201 326 HOH HOH . E 3 HOH A 302 1202 249 HOH HOH . E 3 HOH A 303 1203 232 HOH HOH . E 3 HOH A 304 1204 133 HOH HOH . E 3 HOH A 305 1205 377 HOH HOH . E 3 HOH A 306 1206 323 HOH HOH . E 3 HOH A 307 1207 267 HOH HOH . E 3 HOH A 308 1208 275 HOH HOH . E 3 HOH A 309 1209 89 HOH HOH . E 3 HOH A 310 1210 187 HOH HOH . E 3 HOH A 311 1211 286 HOH HOH . E 3 HOH A 312 1212 258 HOH HOH . E 3 HOH A 313 1213 376 HOH HOH . E 3 HOH A 314 1214 146 HOH HOH . E 3 HOH A 315 1215 204 HOH HOH . E 3 HOH A 316 1216 303 HOH HOH . E 3 HOH A 317 1217 297 HOH HOH . E 3 HOH A 318 1218 132 HOH HOH . E 3 HOH A 319 1219 300 HOH HOH . E 3 HOH A 320 1220 330 HOH HOH . E 3 HOH A 321 1221 334 HOH HOH . E 3 HOH A 322 1222 186 HOH HOH . E 3 HOH A 323 1223 299 HOH HOH . E 3 HOH A 324 1224 153 HOH HOH . E 3 HOH A 325 1225 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 18.16 4.305 32.002 1 42.31 ? C1 EDO 803 A 1 HETATM 2 O O1 EDO . . . D 2 18.362 3.183 32.845 1 46.38 ? O1 EDO 803 A 1 HETATM 3 C C2 EDO . . . D 2 17.371 5.384 32.708 1 41.72 ? C2 EDO 803 A 1 HETATM 4 O O2 EDO . . . D 2 17.524 6.616 31.995 1 39.28 ? O2 EDO 803 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #