data_6CGN # _model_server_result.job_id 8SUa_AGa-iHLryl_sF99Xg _model_server_result.datetime_utc '2024-11-08 04:03:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cgn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 6CGN # _exptl.entry_id 6CGN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CGN _cell.length_a 72.266 _cell.length_b 72.266 _cell.length_c 292.637 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CGN _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 121 n n C1 C2 EDO sing 122 n n C1 H11 EDO sing 123 n n C1 H12 EDO sing 124 n n O1 HO1 EDO sing 125 n n C2 O2 EDO sing 126 n n C2 H21 EDO sing 127 n n C2 H22 EDO sing 128 n n O2 HO2 EDO sing 129 n n # _atom_sites.entry_id 6CGN _atom_sites.fract_transf_matrix[1][1] 0.013838 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013838 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D5M A 1 801 1 D5M DA . C 3 PO4 A 1 802 1 PO4 PO4 . D 4 EDO A 1 803 1 EDO EDO . E 4 EDO A 1 804 2 EDO EDO . F 4 EDO A 1 805 3 EDO EDO . G 5 HOH A 1 901 20 HOH HOH . G 5 HOH A 2 902 104 HOH HOH . G 5 HOH A 3 903 46 HOH HOH . G 5 HOH A 4 904 105 HOH HOH . G 5 HOH A 5 905 47 HOH HOH . G 5 HOH A 6 906 50 HOH HOH . G 5 HOH A 7 907 52 HOH HOH . G 5 HOH A 8 908 4 HOH HOH . G 5 HOH A 9 909 106 HOH HOH . G 5 HOH A 10 910 18 HOH HOH . G 5 HOH A 11 911 64 HOH HOH . G 5 HOH A 12 912 15 HOH HOH . G 5 HOH A 13 913 44 HOH HOH . G 5 HOH A 14 914 38 HOH HOH . G 5 HOH A 15 915 30 HOH HOH . G 5 HOH A 16 916 107 HOH HOH . G 5 HOH A 17 917 116 HOH HOH . G 5 HOH A 18 918 99 HOH HOH . G 5 HOH A 19 919 43 HOH HOH . G 5 HOH A 20 920 81 HOH HOH . G 5 HOH A 21 921 34 HOH HOH . G 5 HOH A 22 922 27 HOH HOH . G 5 HOH A 23 923 21 HOH HOH . G 5 HOH A 24 924 17 HOH HOH . G 5 HOH A 25 925 2 HOH HOH . G 5 HOH A 26 926 41 HOH HOH . G 5 HOH A 27 927 36 HOH HOH . G 5 HOH A 28 928 101 HOH HOH . G 5 HOH A 29 929 80 HOH HOH . G 5 HOH A 30 930 72 HOH HOH . G 5 HOH A 31 931 45 HOH HOH . G 5 HOH A 32 932 35 HOH HOH . G 5 HOH A 33 933 28 HOH HOH . G 5 HOH A 34 934 118 HOH HOH . G 5 HOH A 35 935 12 HOH HOH . G 5 HOH A 36 936 73 HOH HOH . G 5 HOH A 37 937 39 HOH HOH . G 5 HOH A 38 938 114 HOH HOH . G 5 HOH A 39 939 74 HOH HOH . G 5 HOH A 40 940 16 HOH HOH . G 5 HOH A 41 941 32 HOH HOH . G 5 HOH A 42 942 1 HOH HOH . G 5 HOH A 43 943 13 HOH HOH . G 5 HOH A 44 944 98 HOH HOH . G 5 HOH A 45 945 84 HOH HOH . G 5 HOH A 46 946 103 HOH HOH . G 5 HOH A 47 947 10 HOH HOH . G 5 HOH A 48 948 7 HOH HOH . G 5 HOH A 49 949 8 HOH HOH . G 5 HOH A 50 950 71 HOH HOH . G 5 HOH A 51 951 96 HOH HOH . G 5 HOH A 52 952 49 HOH HOH . G 5 HOH A 53 953 91 HOH HOH . G 5 HOH A 54 954 93 HOH HOH . G 5 HOH A 55 955 26 HOH HOH . G 5 HOH A 56 956 58 HOH HOH . G 5 HOH A 57 957 75 HOH HOH . G 5 HOH A 58 958 112 HOH HOH . G 5 HOH A 59 959 100 HOH HOH . G 5 HOH A 60 960 69 HOH HOH . G 5 HOH A 61 961 24 HOH HOH . G 5 HOH A 62 962 57 HOH HOH . G 5 HOH A 63 963 65 HOH HOH . G 5 HOH A 64 964 92 HOH HOH . G 5 HOH A 65 965 113 HOH HOH . G 5 HOH A 66 966 25 HOH HOH . G 5 HOH A 67 967 87 HOH HOH . G 5 HOH A 68 968 82 HOH HOH . G 5 HOH A 69 969 14 HOH HOH . G 5 HOH A 70 970 85 HOH HOH . G 5 HOH A 71 971 11 HOH HOH . G 5 HOH A 72 972 76 HOH HOH . G 5 HOH A 73 973 23 HOH HOH . G 5 HOH A 74 974 66 HOH HOH . G 5 HOH A 75 975 77 HOH HOH . G 5 HOH A 76 976 61 HOH HOH . G 5 HOH A 77 977 83 HOH HOH . G 5 HOH A 78 978 40 HOH HOH . G 5 HOH A 79 979 19 HOH HOH . G 5 HOH A 80 980 6 HOH HOH . G 5 HOH A 81 981 95 HOH HOH . G 5 HOH A 82 982 62 HOH HOH . G 5 HOH A 83 983 33 HOH HOH . G 5 HOH A 84 984 5 HOH HOH . G 5 HOH A 85 985 54 HOH HOH . G 5 HOH A 86 986 9 HOH HOH . G 5 HOH A 87 987 102 HOH HOH . G 5 HOH A 88 988 97 HOH HOH . G 5 HOH A 89 989 31 HOH HOH . G 5 HOH A 90 990 88 HOH HOH . G 5 HOH A 91 991 63 HOH HOH . G 5 HOH A 92 992 60 HOH HOH . G 5 HOH A 93 993 94 HOH HOH . G 5 HOH A 94 994 119 HOH HOH . G 5 HOH A 95 995 59 HOH HOH . G 5 HOH A 96 996 67 HOH HOH . G 5 HOH A 97 997 29 HOH HOH . G 5 HOH A 98 998 68 HOH HOH . G 5 HOH A 99 999 89 HOH HOH . G 5 HOH A 100 1000 37 HOH HOH . G 5 HOH A 101 1001 111 HOH HOH . G 5 HOH A 102 1002 90 HOH HOH . G 5 HOH A 103 1003 42 HOH HOH . G 5 HOH A 104 1004 53 HOH HOH . G 5 HOH A 105 1005 48 HOH HOH . G 5 HOH A 106 1006 109 HOH HOH . G 5 HOH A 107 1007 115 HOH HOH . G 5 HOH A 108 1008 108 HOH HOH . G 5 HOH A 109 1009 22 HOH HOH . G 5 HOH A 110 1010 56 HOH HOH . G 5 HOH A 111 1011 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 25.836 -19.501 39.872 1 45.1 ? C1 EDO 803 A 1 HETATM 2 O O1 EDO . . . D 4 25.53 -18.206 39.347 1 44.65 ? O1 EDO 803 A 1 HETATM 3 C C2 EDO . . . D 4 27.339 -19.747 39.805 1 44.86 ? C2 EDO 803 A 1 HETATM 4 O O2 EDO . . . D 4 27.597 -21.001 39.161 1 45.07 ? O2 EDO 803 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #