data_6CH0 # _model_server_result.job_id 5vw1QiABVyNb23G4mmgAxg _model_server_result.datetime_utc '2024-11-28 23:44:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ch0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":305}' # _entry.id 6CH0 # _exptl.entry_id 6CH0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.91 _cell.angle_gamma 90 _cell.entry_id 6CH0 _cell.length_a 110.84 _cell.length_b 113.5 _cell.length_c 79.1 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CH0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression C,O,P,Q,R,S,V 1 1 A,D,E,F,G,H,I,T 1 3 B,J,K,L,M,N,U 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_657 -x+1,y,-z+2 -1 0 0 0 1 0 0 0 -1 59.570143 0 149.661758 3 'crystal symmetry operation' 4_556 -x+1/2,y+1/2,-z+1 -1 0 0 0 1 0 0 0 -1 29.785071 56.75 74.830879 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 L N N ? 4 M N N ? 4 Q N N ? 4 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 117 C HIS 118 1_555 E CO CO . C CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc2 A ND1 HIS 119 C HIS 120 1_555 E CO CO . C CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc3 A OD2 ASP 121 C ASP 122 1_555 D CO CO . C CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc4 A NE2 HIS 122 C HIS 123 1_555 D CO CO . C CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc5 A NE2 HIS 197 C HIS 198 1_555 E CO CO . C CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc6 A OD1 ASP 219 C ASP 220 1_555 D CO CO . C CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc7 A OD2 ASP 219 C ASP 220 1_555 D CO CO . C CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc8 A OD2 ASP 219 C ASP 220 1_555 E CO CO . C CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? metalc ? metalc9 A NE2 HIS 265 C HIS 266 1_555 D CO CO . C CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc10 D CO CO . C CO 301 1_555 I O2 GOL . C GOL 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? metalc ? metalc11 E CO CO . C CO 302 1_555 I O3 GOL . C GOL 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc12 B NE2 HIS 117 F HIS 118 1_555 K CO CO . F CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc13 B ND1 HIS 119 F HIS 120 1_555 K CO CO . F CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc14 B OD2 ASP 121 F ASP 122 1_555 J CO CO . F CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc15 B NE2 HIS 122 F HIS 123 1_555 J CO CO . F CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc16 B NE2 HIS 197 F HIS 198 1_555 K CO CO . F CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc17 B OD1 ASP 219 F ASP 220 1_555 J CO CO . F CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc18 B OD2 ASP 219 F ASP 220 1_555 J CO CO . F CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc19 B OD2 ASP 219 F ASP 220 1_555 K CO CO . F CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc20 B NE2 HIS 265 F HIS 266 1_555 J CO CO . F CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc21 J CO CO . F CO 301 1_555 N O2 GOL . F GOL 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc22 K CO CO . F CO 302 1_555 N O1 GOL . F GOL 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc23 C NE2 HIS 117 I HIS 118 1_555 P CO CO . I CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc24 C ND1 HIS 119 I HIS 120 1_555 P CO CO . I CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc25 C OD2 ASP 121 I ASP 122 1_555 O CO CO . I CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc26 C NE2 HIS 122 I HIS 123 1_555 O CO CO . I CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc27 C NE2 HIS 197 I HIS 198 1_555 P CO CO . I CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc28 C OD1 ASP 219 I ASP 220 1_555 O CO CO . I CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc29 C OD2 ASP 219 I ASP 220 1_555 O CO CO . I CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc30 C OD2 ASP 219 I ASP 220 1_555 P CO CO . I CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.875 ? metalc ? metalc31 C NE2 HIS 265 I HIS 266 1_555 O CO CO . I CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc32 O CO CO . I CO 301 1_555 S O2 GOL . I GOL 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 259 n n O1 HO1 PG4 sing 260 n n C1 C2 PG4 sing 261 n n C1 H11 PG4 sing 262 n n C1 H12 PG4 sing 263 n n C2 O2 PG4 sing 264 n n C2 H21 PG4 sing 265 n n C2 H22 PG4 sing 266 n n O2 C3 PG4 sing 267 n n C3 C4 PG4 sing 268 n n C3 H31 PG4 sing 269 n n C3 H32 PG4 sing 270 n n C4 O3 PG4 sing 271 n n C4 H41 PG4 sing 272 n n C4 H42 PG4 sing 273 n n O3 C5 PG4 sing 274 n n C5 C6 PG4 sing 275 n n C5 H51 PG4 sing 276 n n C5 H52 PG4 sing 277 n n C6 O4 PG4 sing 278 n n C6 H61 PG4 sing 279 n n C6 H62 PG4 sing 280 n n O4 C7 PG4 sing 281 n n C7 C8 PG4 sing 282 n n C7 H71 PG4 sing 283 n n C7 H72 PG4 sing 284 n n C8 O5 PG4 sing 285 n n C8 H81 PG4 sing 286 n n C8 H82 PG4 sing 287 n n O5 HO5 PG4 sing 288 n n # _atom_sites.entry_id 6CH0 _atom_sites.fract_transf_matrix[1][1] 0.009022 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00309 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013363 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CO C 1 301 5 CO CO . E 2 CO C 1 302 6 CO CO . F 3 EDO C 1 303 1 EDO EDO . G 3 EDO C 1 304 2 EDO EDO . H 4 PG4 C 1 305 1 PG4 PG4 . I 5 GOL C 1 306 1 GOL GOL . J 2 CO F 1 301 5 CO CO . K 2 CO F 1 302 6 CO CO . L 4 PG4 F 1 303 3 PG4 PG4 . M 4 PG4 F 1 304 4 PG4 PG4 . N 5 GOL F 1 305 2 GOL GOL . O 2 CO I 1 301 5 CO CO . P 2 CO I 1 302 6 CO CO . Q 4 PG4 I 1 303 2 PG4 PG4 . R 4 PG4 I 1 304 5 PG4 PG4 . S 5 GOL I 1 305 3 GOL GOL . T 6 HOH C 1 401 64 HOH HOH . T 6 HOH C 2 402 32 HOH HOH . T 6 HOH C 3 403 2 HOH HOH . T 6 HOH C 4 404 53 HOH HOH . T 6 HOH C 5 405 111 HOH HOH . T 6 HOH C 6 406 3 HOH HOH . T 6 HOH C 7 407 26 HOH HOH . T 6 HOH C 8 408 67 HOH HOH . T 6 HOH C 9 409 22 HOH HOH . T 6 HOH C 10 410 128 HOH HOH . T 6 HOH C 11 411 110 HOH HOH . T 6 HOH C 12 412 17 HOH HOH . T 6 HOH C 13 413 115 HOH HOH . T 6 HOH C 14 414 118 HOH HOH . T 6 HOH C 15 415 23 HOH HOH . T 6 HOH C 16 416 38 HOH HOH . T 6 HOH C 17 417 92 HOH HOH . T 6 HOH C 18 418 75 HOH HOH . T 6 HOH C 19 419 88 HOH HOH . T 6 HOH C 20 420 69 HOH HOH . T 6 HOH C 21 421 41 HOH HOH . T 6 HOH C 22 422 24 HOH HOH . T 6 HOH C 23 423 28 HOH HOH . T 6 HOH C 24 424 12 HOH HOH . T 6 HOH C 25 425 15 HOH HOH . T 6 HOH C 26 426 123 HOH HOH . T 6 HOH C 27 427 129 HOH HOH . T 6 HOH C 28 428 112 HOH HOH . T 6 HOH C 29 429 42 HOH HOH . T 6 HOH C 30 430 102 HOH HOH . T 6 HOH C 31 431 66 HOH HOH . T 6 HOH C 32 432 109 HOH HOH . T 6 HOH C 33 433 50 HOH HOH . T 6 HOH C 34 434 13 HOH HOH . T 6 HOH C 35 435 117 HOH HOH . T 6 HOH C 36 436 107 HOH HOH . T 6 HOH C 37 437 18 HOH HOH . T 6 HOH C 38 438 16 HOH HOH . T 6 HOH C 39 439 14 HOH HOH . T 6 HOH C 40 440 93 HOH HOH . T 6 HOH C 41 441 97 HOH HOH . T 6 HOH C 42 442 1 HOH HOH . T 6 HOH C 43 443 51 HOH HOH . T 6 HOH C 44 444 124 HOH HOH . T 6 HOH C 45 445 54 HOH HOH . T 6 HOH C 46 446 126 HOH HOH . T 6 HOH C 47 447 70 HOH HOH . T 6 HOH C 48 448 55 HOH HOH . T 6 HOH C 49 449 73 HOH HOH . U 6 HOH F 1 401 45 HOH HOH . U 6 HOH F 2 402 104 HOH HOH . U 6 HOH F 3 403 27 HOH HOH . U 6 HOH F 4 404 60 HOH HOH . U 6 HOH F 5 405 74 HOH HOH . U 6 HOH F 6 406 5 HOH HOH . U 6 HOH F 7 407 7 HOH HOH . U 6 HOH F 8 408 21 HOH HOH . U 6 HOH F 9 409 56 HOH HOH . U 6 HOH F 10 410 31 HOH HOH . U 6 HOH F 11 411 20 HOH HOH . U 6 HOH F 12 412 72 HOH HOH . U 6 HOH F 13 413 34 HOH HOH . U 6 HOH F 14 414 82 HOH HOH . U 6 HOH F 15 415 122 HOH HOH . U 6 HOH F 16 416 37 HOH HOH . U 6 HOH F 17 417 44 HOH HOH . U 6 HOH F 18 418 48 HOH HOH . U 6 HOH F 19 419 29 HOH HOH . U 6 HOH F 20 420 94 HOH HOH . U 6 HOH F 21 421 33 HOH HOH . U 6 HOH F 22 422 30 HOH HOH . U 6 HOH F 23 423 68 HOH HOH . U 6 HOH F 24 424 57 HOH HOH . U 6 HOH F 25 425 52 HOH HOH . U 6 HOH F 26 426 127 HOH HOH . U 6 HOH F 27 427 43 HOH HOH . U 6 HOH F 28 428 63 HOH HOH . U 6 HOH F 29 429 36 HOH HOH . U 6 HOH F 30 430 96 HOH HOH . U 6 HOH F 31 431 6 HOH HOH . U 6 HOH F 32 432 87 HOH HOH . U 6 HOH F 33 433 98 HOH HOH . U 6 HOH F 34 434 100 HOH HOH . U 6 HOH F 35 435 58 HOH HOH . U 6 HOH F 36 436 120 HOH HOH . U 6 HOH F 37 437 85 HOH HOH . U 6 HOH F 38 438 101 HOH HOH . U 6 HOH F 39 439 108 HOH HOH . U 6 HOH F 40 440 83 HOH HOH . U 6 HOH F 41 441 19 HOH HOH . U 6 HOH F 42 442 71 HOH HOH . U 6 HOH F 43 443 62 HOH HOH . U 6 HOH F 44 444 86 HOH HOH . U 6 HOH F 45 445 78 HOH HOH . U 6 HOH F 46 446 119 HOH HOH . U 6 HOH F 47 447 131 HOH HOH . U 6 HOH F 48 448 135 HOH HOH . U 6 HOH F 49 449 65 HOH HOH . U 6 HOH F 50 450 47 HOH HOH . V 6 HOH I 1 401 40 HOH HOH . V 6 HOH I 2 402 113 HOH HOH . V 6 HOH I 3 403 59 HOH HOH . V 6 HOH I 4 404 95 HOH HOH . V 6 HOH I 5 405 76 HOH HOH . V 6 HOH I 6 406 35 HOH HOH . V 6 HOH I 7 407 10 HOH HOH . V 6 HOH I 8 408 39 HOH HOH . V 6 HOH I 9 409 105 HOH HOH . V 6 HOH I 10 410 80 HOH HOH . V 6 HOH I 11 411 61 HOH HOH . V 6 HOH I 12 412 9 HOH HOH . V 6 HOH I 13 413 106 HOH HOH . V 6 HOH I 14 414 49 HOH HOH . V 6 HOH I 15 415 130 HOH HOH . V 6 HOH I 16 416 89 HOH HOH . V 6 HOH I 17 417 125 HOH HOH . V 6 HOH I 18 418 84 HOH HOH . V 6 HOH I 19 419 90 HOH HOH . V 6 HOH I 20 420 25 HOH HOH . V 6 HOH I 21 421 8 HOH HOH . V 6 HOH I 22 422 11 HOH HOH . V 6 HOH I 23 423 99 HOH HOH . V 6 HOH I 24 424 121 HOH HOH . V 6 HOH I 25 425 133 HOH HOH . V 6 HOH I 26 426 103 HOH HOH . V 6 HOH I 27 427 77 HOH HOH . V 6 HOH I 28 428 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . H 4 15.523 -14.763 21.699 1 63.42 ? O1 PG4 305 C 1 HETATM 2 C C1 PG4 . . . H 4 14.166 -14.821 22.155 1 71.3 ? C1 PG4 305 C 1 HETATM 3 C C2 PG4 . . . H 4 13.498 -16.085 21.624 1 74.58 ? C2 PG4 305 C 1 HETATM 4 O O2 PG4 . . . H 4 12.475 -15.765 20.68 1 72.32 ? O2 PG4 305 C 1 HETATM 5 C C3 PG4 . . . H 4 12.947 -15.915 19.347 1 66.82 ? C3 PG4 305 C 1 HETATM 6 C C4 PG4 . . . H 4 12.704 -17.329 18.844 1 61.39 ? C4 PG4 305 C 1 HETATM 7 O O3 PG4 . . . H 4 13.951 -17.92 18.469 1 68.51 ? O3 PG4 305 C 1 HETATM 8 C C5 PG4 . . . H 4 14.443 -17.469 17.206 1 62.74 ? C5 PG4 305 C 1 HETATM 9 C C6 PG4 . . . H 4 15.889 -17.918 17.027 1 64.92 ? C6 PG4 305 C 1 HETATM 10 O O4 PG4 . . . H 4 16.505 -17.227 15.933 1 70.69 ? O4 PG4 305 C 1 HETATM 11 C C7 PG4 . . . H 4 17.218 -16.037 16.29 1 74.71 ? C7 PG4 305 C 1 HETATM 12 C C8 PG4 . . . H 4 18.408 -16.345 17.207 1 77.24 ? C8 PG4 305 C 1 HETATM 13 O O5 PG4 . . . H 4 19.126 -15.147 17.526 1 59.32 ? O5 PG4 305 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #