data_6CIA # _model_server_result.job_id 0prSS4qwYXDQ5aOayKqbRQ _model_server_result.datetime_utc '2024-11-09 02:13:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cia # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6CIA # _exptl.entry_id 6CIA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CIA _cell.length_a 83.626 _cell.length_b 83.626 _cell.length_c 72.834 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CIA _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 237 n n PA O2A NDP sing 238 n n PA O5B NDP sing 239 n n PA O3 NDP sing 240 n n O2A HOA2 NDP sing 241 n n O5B C5B NDP sing 242 n n C5B C4B NDP sing 243 n n C5B H51A NDP sing 244 n n C5B H52A NDP sing 245 n n C4B O4B NDP sing 246 n n C4B C3B NDP sing 247 n n C4B H4B NDP sing 248 n n O4B C1B NDP sing 249 n n C3B O3B NDP sing 250 n n C3B C2B NDP sing 251 n n C3B H3B NDP sing 252 n n O3B HO3A NDP sing 253 n n C2B O2B NDP sing 254 n n C2B C1B NDP sing 255 n n C2B H2B NDP sing 256 n n O2B P2B NDP sing 257 n n C1B N9A NDP sing 258 n n C1B H1B NDP sing 259 n n N9A C8A NDP sing 260 n y N9A C4A NDP sing 261 n y C8A N7A NDP doub 262 n y C8A H8A NDP sing 263 n n N7A C5A NDP sing 264 n y C5A C6A NDP sing 265 n y C5A C4A NDP doub 266 n y C6A N6A NDP sing 267 n n C6A N1A NDP doub 268 n y N6A H61A NDP sing 269 n n N6A H62A NDP sing 270 n n N1A C2A NDP sing 271 n y C2A N3A NDP doub 272 n y C2A H2A NDP sing 273 n n N3A C4A NDP sing 274 n y O3 PN NDP sing 275 n n PN O1N NDP doub 276 n n PN O2N NDP sing 277 n n PN O5D NDP sing 278 n n O2N H21N NDP sing 279 n n O5D C5D NDP sing 280 n n C5D C4D NDP sing 281 n n C5D H51N NDP sing 282 n n C5D H52N NDP sing 283 n n C4D O4D NDP sing 284 n n C4D C3D NDP sing 285 n n C4D H4D NDP sing 286 n n O4D C1D NDP sing 287 n n C3D O3D NDP sing 288 n n C3D C2D NDP sing 289 n n C3D H3D NDP sing 290 n n O3D HO3N NDP sing 291 n n C2D O2D NDP sing 292 n n C2D C1D NDP sing 293 n n C2D H2D NDP sing 294 n n O2D HO2N NDP sing 295 n n C1D N1N NDP sing 296 n n C1D H1D NDP sing 297 n n N1N C2N NDP sing 298 n n N1N C6N NDP sing 299 n n C2N C3N NDP doub 300 n n C2N H2N NDP sing 301 n n C3N C7N NDP sing 302 n n C3N C4N NDP sing 303 n n C7N O7N NDP doub 304 n n C7N N7N NDP sing 305 n n N7N H71N NDP sing 306 n n N7N H72N NDP sing 307 n n C4N C5N NDP sing 308 n n C4N H41N NDP sing 309 n n C4N H42N NDP sing 310 n n C5N C6N NDP doub 311 n n C5N H5N NDP sing 312 n n C6N H6N NDP sing 313 n n P2B O1X NDP doub 314 n n P2B O2X NDP sing 315 n n P2B O3X NDP sing 316 n n O2X HOP2 NDP sing 317 n n O3X HOP3 NDP sing 318 n n # _atom_sites.entry_id 6CIA _atom_sites.fract_transf_matrix[1][1] 0.011958 _atom_sites.fract_transf_matrix[1][2] 0.006904 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013808 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 301 1 NDP NDP . C 3 HOH A 1 401 100 HOH HOH . C 3 HOH A 2 402 103 HOH HOH . C 3 HOH A 3 403 84 HOH HOH . C 3 HOH A 4 404 104 HOH HOH . C 3 HOH A 5 405 36 HOH HOH . C 3 HOH A 6 406 48 HOH HOH . C 3 HOH A 7 407 88 HOH HOH . C 3 HOH A 8 408 17 HOH HOH . C 3 HOH A 9 409 85 HOH HOH . C 3 HOH A 10 410 97 HOH HOH . C 3 HOH A 11 411 120 HOH HOH . C 3 HOH A 12 412 175 HOH HOH . C 3 HOH A 13 413 32 HOH HOH . C 3 HOH A 14 414 106 HOH HOH . C 3 HOH A 15 415 18 HOH HOH . C 3 HOH A 16 416 77 HOH HOH . C 3 HOH A 17 417 35 HOH HOH . C 3 HOH A 18 418 143 HOH HOH . C 3 HOH A 19 419 93 HOH HOH . C 3 HOH A 20 420 16 HOH HOH . C 3 HOH A 21 421 38 HOH HOH . C 3 HOH A 22 422 69 HOH HOH . C 3 HOH A 23 423 115 HOH HOH . C 3 HOH A 24 424 118 HOH HOH . C 3 HOH A 25 425 135 HOH HOH . C 3 HOH A 26 426 39 HOH HOH . C 3 HOH A 27 427 14 HOH HOH . C 3 HOH A 28 428 107 HOH HOH . C 3 HOH A 29 429 99 HOH HOH . C 3 HOH A 30 430 54 HOH HOH . C 3 HOH A 31 431 22 HOH HOH . C 3 HOH A 32 432 152 HOH HOH . C 3 HOH A 33 433 56 HOH HOH . C 3 HOH A 34 434 12 HOH HOH . C 3 HOH A 35 435 95 HOH HOH . C 3 HOH A 36 436 110 HOH HOH . C 3 HOH A 37 437 24 HOH HOH . C 3 HOH A 38 438 13 HOH HOH . C 3 HOH A 39 439 26 HOH HOH . C 3 HOH A 40 440 117 HOH HOH . C 3 HOH A 41 441 124 HOH HOH . C 3 HOH A 42 442 47 HOH HOH . C 3 HOH A 43 443 46 HOH HOH . C 3 HOH A 44 444 92 HOH HOH . C 3 HOH A 45 445 31 HOH HOH . C 3 HOH A 46 446 134 HOH HOH . C 3 HOH A 47 447 155 HOH HOH . C 3 HOH A 48 448 114 HOH HOH . C 3 HOH A 49 449 20 HOH HOH . C 3 HOH A 50 450 137 HOH HOH . C 3 HOH A 51 451 59 HOH HOH . C 3 HOH A 52 452 112 HOH HOH . C 3 HOH A 53 453 142 HOH HOH . C 3 HOH A 54 454 19 HOH HOH . C 3 HOH A 55 455 57 HOH HOH . C 3 HOH A 56 456 27 HOH HOH . C 3 HOH A 57 457 42 HOH HOH . C 3 HOH A 58 458 172 HOH HOH . C 3 HOH A 59 459 130 HOH HOH . C 3 HOH A 60 460 3 HOH HOH . C 3 HOH A 61 461 52 HOH HOH . C 3 HOH A 62 462 5 HOH HOH . C 3 HOH A 63 463 23 HOH HOH . C 3 HOH A 64 464 41 HOH HOH . C 3 HOH A 65 465 63 HOH HOH . C 3 HOH A 66 466 58 HOH HOH . C 3 HOH A 67 467 70 HOH HOH . C 3 HOH A 68 468 1 HOH HOH . C 3 HOH A 69 469 138 HOH HOH . C 3 HOH A 70 470 6 HOH HOH . C 3 HOH A 71 471 89 HOH HOH . C 3 HOH A 72 472 74 HOH HOH . C 3 HOH A 73 473 25 HOH HOH . C 3 HOH A 74 474 128 HOH HOH . C 3 HOH A 75 475 71 HOH HOH . C 3 HOH A 76 476 81 HOH HOH . C 3 HOH A 77 477 64 HOH HOH . C 3 HOH A 78 478 105 HOH HOH . C 3 HOH A 79 479 98 HOH HOH . C 3 HOH A 80 480 30 HOH HOH . C 3 HOH A 81 481 168 HOH HOH . C 3 HOH A 82 482 122 HOH HOH . C 3 HOH A 83 483 144 HOH HOH . C 3 HOH A 84 484 83 HOH HOH . C 3 HOH A 85 485 28 HOH HOH . C 3 HOH A 86 486 73 HOH HOH . C 3 HOH A 87 487 154 HOH HOH . C 3 HOH A 88 488 34 HOH HOH . C 3 HOH A 89 489 43 HOH HOH . C 3 HOH A 90 490 33 HOH HOH . C 3 HOH A 91 491 113 HOH HOH . C 3 HOH A 92 492 111 HOH HOH . C 3 HOH A 93 493 108 HOH HOH . C 3 HOH A 94 494 101 HOH HOH . C 3 HOH A 95 495 10 HOH HOH . C 3 HOH A 96 496 157 HOH HOH . C 3 HOH A 97 497 66 HOH HOH . C 3 HOH A 98 498 136 HOH HOH . C 3 HOH A 99 499 67 HOH HOH . C 3 HOH A 100 500 44 HOH HOH . C 3 HOH A 101 501 119 HOH HOH . C 3 HOH A 102 502 166 HOH HOH . C 3 HOH A 103 503 55 HOH HOH . C 3 HOH A 104 504 79 HOH HOH . C 3 HOH A 105 505 37 HOH HOH . C 3 HOH A 106 506 65 HOH HOH . C 3 HOH A 107 507 109 HOH HOH . C 3 HOH A 108 508 50 HOH HOH . C 3 HOH A 109 509 80 HOH HOH . C 3 HOH A 110 510 126 HOH HOH . C 3 HOH A 111 511 121 HOH HOH . C 3 HOH A 112 512 9 HOH HOH . C 3 HOH A 113 513 158 HOH HOH . C 3 HOH A 114 514 78 HOH HOH . C 3 HOH A 115 515 53 HOH HOH . C 3 HOH A 116 516 11 HOH HOH . C 3 HOH A 117 517 87 HOH HOH . C 3 HOH A 118 518 161 HOH HOH . C 3 HOH A 119 519 2 HOH HOH . C 3 HOH A 120 520 160 HOH HOH . C 3 HOH A 121 521 145 HOH HOH . C 3 HOH A 122 522 125 HOH HOH . C 3 HOH A 123 523 91 HOH HOH . C 3 HOH A 124 524 171 HOH HOH . C 3 HOH A 125 525 15 HOH HOH . C 3 HOH A 126 526 156 HOH HOH . C 3 HOH A 127 527 68 HOH HOH . C 3 HOH A 128 528 165 HOH HOH . C 3 HOH A 129 529 140 HOH HOH . C 3 HOH A 130 530 51 HOH HOH . C 3 HOH A 131 531 86 HOH HOH . C 3 HOH A 132 532 40 HOH HOH . C 3 HOH A 133 533 102 HOH HOH . C 3 HOH A 134 534 133 HOH HOH . C 3 HOH A 135 535 176 HOH HOH . C 3 HOH A 136 536 96 HOH HOH . C 3 HOH A 137 537 94 HOH HOH . C 3 HOH A 138 538 159 HOH HOH . C 3 HOH A 139 539 127 HOH HOH . C 3 HOH A 140 540 174 HOH HOH . C 3 HOH A 141 541 75 HOH HOH . C 3 HOH A 142 542 129 HOH HOH . C 3 HOH A 143 543 7 HOH HOH . C 3 HOH A 144 544 4 HOH HOH . C 3 HOH A 145 545 141 HOH HOH . C 3 HOH A 146 546 153 HOH HOH . C 3 HOH A 147 547 131 HOH HOH . C 3 HOH A 148 548 116 HOH HOH . C 3 HOH A 149 549 76 HOH HOH . C 3 HOH A 150 550 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . B 2 28.022 9.176 28.062 1 33.84 ? PA NDP 301 A 1 HETATM 2 O O1A NDP . . . B 2 27.289 8.002 27.506 1 31.08 ? O1A NDP 301 A 1 HETATM 3 O O2A NDP . . . B 2 28.706 8.94 29.396 1 33.46 ? O2A NDP 301 A 1 HETATM 4 O O5B NDP . . . B 2 26.98 10.377 28.267 1 36.67 ? O5B NDP 301 A 1 HETATM 5 C C5B NDP . . . B 2 27.344 11.655 28.824 1 34.91 ? C5B NDP 301 A 1 HETATM 6 C C4B NDP . . . B 2 26.103 12.502 28.73 1 33.29 ? C4B NDP 301 A 1 HETATM 7 O O4B NDP . . . B 2 25.035 11.893 29.497 1 28.78 ? O4B NDP 301 A 1 HETATM 8 C C3B NDP . . . B 2 26.251 13.934 29.237 1 29.11 ? C3B NDP 301 A 1 HETATM 9 O O3B NDP . . . B 2 25.587 14.819 28.339 1 32.8 ? O3B NDP 301 A 1 HETATM 10 C C2B NDP . . . B 2 25.575 13.878 30.603 1 32.07 ? C2B NDP 301 A 1 HETATM 11 O O2B NDP . . . B 2 25.065 15.175 30.972 1 36.27 ? O2B NDP 301 A 1 HETATM 12 C C1B NDP . . . B 2 24.477 12.841 30.389 1 29.68 ? C1B NDP 301 A 1 HETATM 13 N N9A NDP . . . B 2 24.076 12.13 31.602 1 34.66 ? N9A NDP 301 A 1 HETATM 14 C C8A NDP . . . B 2 24.897 11.445 32.46 1 31.16 ? C8A NDP 301 A 1 HETATM 15 N N7A NDP . . . B 2 24.265 10.799 33.409 1 34.3 ? N7A NDP 301 A 1 HETATM 16 C C5A NDP . . . B 2 22.93 11.077 33.16 1 34.6 ? C5A NDP 301 A 1 HETATM 17 C C6A NDP . . . B 2 21.741 10.657 33.787 1 37.05 ? C6A NDP 301 A 1 HETATM 18 N N6A NDP . . . B 2 21.707 9.809 34.818 1 35.85 ? N6A NDP 301 A 1 HETATM 19 N N1A NDP . . . B 2 20.57 11.111 33.284 1 42.29 ? N1A NDP 301 A 1 HETATM 20 C C2A NDP . . . B 2 20.597 11.924 32.223 1 36.73 ? C2A NDP 301 A 1 HETATM 21 N N3A NDP . . . B 2 21.655 12.376 31.542 1 39.57 ? N3A NDP 301 A 1 HETATM 22 C C4A NDP . . . B 2 22.798 11.91 32.059 1 32.86 ? C4A NDP 301 A 1 HETATM 23 O O3 NDP . . . B 2 29.104 9.787 27.068 1 37.34 ? O3 NDP 301 A 1 HETATM 24 P PN NDP . . . B 2 30.663 10.116 27.062 1 54.08 ? PN NDP 301 A 1 HETATM 25 O O1N NDP . . . B 2 31.1 10.459 25.691 1 73.63 ? O1N NDP 301 A 1 HETATM 26 O O2N NDP . . . B 2 30.899 11.204 28.076 1 45.84 ? O2N NDP 301 A 1 HETATM 27 O O5D NDP . . . B 2 31.45 8.786 27.552 1 55.17 ? O5D NDP 301 A 1 HETATM 28 C C5D NDP . . . B 2 31.771 8.425 28.907 1 37.55 ? C5D NDP 301 A 1 HETATM 29 C C4D NDP . . . B 2 33.241 8.625 29.192 1 38.9 ? C4D NDP 301 A 1 HETATM 30 O O4D NDP . . . B 2 34.023 7.704 28.407 1 38.28 ? O4D NDP 301 A 1 HETATM 31 C C3D NDP . . . B 2 33.853 9.984 28.888 1 35.52 ? C3D NDP 301 A 1 HETATM 32 O O3D NDP . . . B 2 33.584 10.968 29.877 1 38.12 ? O3D NDP 301 A 1 HETATM 33 C C2D NDP . . . B 2 35.341 9.634 28.828 1 39.39 ? C2D NDP 301 A 1 HETATM 34 O O2D NDP . . . B 2 35.898 9.528 30.136 1 29.47 ? O2D NDP 301 A 1 HETATM 35 C C1D NDP . . . B 2 35.3 8.261 28.139 1 39.04 ? C1D NDP 301 A 1 HETATM 36 N N1N NDP . . . B 2 35.507 8.283 26.686 1 45.61 ? N1N NDP 301 A 1 HETATM 37 C C2N NDP . . . B 2 36.629 7.628 26.08 1 48.14 ? C2N NDP 301 A 1 HETATM 38 C C3N NDP . . . B 2 36.848 7.621 24.747 1 52.99 ? C3N NDP 301 A 1 HETATM 39 C C7N NDP . . . B 2 37.95 6.819 24.132 1 56.15 ? C7N NDP 301 A 1 HETATM 40 O O7N NDP . . . B 2 38.206 6.966 22.922 1 34.71 ? O7N NDP 301 A 1 HETATM 41 N N7N NDP . . . B 2 38.608 5.932 24.88 1 34.99 ? N7N NDP 301 A 1 HETATM 42 C C4N NDP . . . B 2 35.956 8.386 23.837 1 49.79 ? C4N NDP 301 A 1 HETATM 43 C C5N NDP . . . B 2 34.769 8.95 24.52 1 53.67 ? C5N NDP 301 A 1 HETATM 44 C C6N NDP . . . B 2 34.617 8.878 25.834 1 51.72 ? C6N NDP 301 A 1 HETATM 45 P P2B NDP . . . B 2 25.672 16.021 32.207 1 38.42 ? P2B NDP 301 A 1 HETATM 46 O O1X NDP . . . B 2 25.087 15.395 33.424 1 27.11 ? O1X NDP 301 A 1 HETATM 47 O O2X NDP . . . B 2 25.3 17.497 31.954 1 46.26 ? O2X NDP 301 A 1 HETATM 48 O O3X NDP . . . B 2 27.187 15.963 32.162 1 29.59 ? O3X NDP 301 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #