data_6CJ5 # _model_server_result.job_id r6wQ5UrSgAKtMoVlLJwcAw _model_server_result.datetime_utc '2024-11-23 23:13:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cj5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6CJ5 # _exptl.entry_id 6CJ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.245 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(pyridin-3-yl)imidazo[1,2-a]pyridine-8-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CJ5 _cell.length_a 105.37 _cell.length_b 105.37 _cell.length_c 72.4 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CJ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 242 A CYS 311 1_555 A SG CYS 245 A CYS 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc1 A SG CYS 230 A CYS 299 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc2 A SG CYS 242 A CYS 311 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc3 A SG CYS 245 A CYS 314 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? # _chem_comp.formula 'C13 H10 N4 O' _chem_comp.formula_weight 238.245 _chem_comp.id F4G _chem_comp.mon_nstd_flag . _chem_comp.name 3-(pyridin-3-yl)imidazo[1,2-a]pyridine-8-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C13 F4G doub 83 n y C14 C15 F4G sing 84 n y C13 N12 F4G sing 85 n y C15 C10 F4G doub 86 n y C5 C4 F4G doub 87 n y C5 C6 F4G sing 88 n y C4 N3 F4G sing 89 n y N12 C11 F4G doub 90 n y C10 C11 F4G sing 91 n y C10 C9 F4G sing 92 n n C6 C1 F4G doub 93 n y N3 C9 F4G sing 94 n y N3 C2 F4G sing 95 n y C9 C8 F4G doub 96 n y C1 C2 F4G sing 97 n y C1 C16 F4G sing 98 n n C2 N7 F4G doub 99 n y C8 N7 F4G sing 100 n y N18 C16 F4G sing 101 n n C16 O17 F4G doub 102 n n N18 H1 F4G sing 103 n n N18 H2 F4G sing 104 n n C6 H3 F4G sing 105 n n C5 H4 F4G sing 106 n n C4 H5 F4G sing 107 n n C8 H6 F4G sing 108 n n C15 H7 F4G sing 109 n n C14 H8 F4G sing 110 n n C13 H9 F4G sing 111 n n C11 H10 F4G sing 112 n n # _atom_sites.entry_id 6CJ5 _atom_sites.fract_transf_matrix[1][1] 0.00949 _atom_sites.fract_transf_matrix[1][2] 0.005479 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010959 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 41 ZN ZN . C 3 F4G A 1 402 1 F4G et2 . D 4 HOH A 1 501 7 HOH HOH . D 4 HOH A 2 502 6 HOH HOH . D 4 HOH A 3 503 4 HOH HOH . D 4 HOH A 4 504 1 HOH HOH . D 4 HOH A 5 505 3 HOH HOH . D 4 HOH A 6 506 2 HOH HOH . D 4 HOH A 7 507 5 HOH HOH . D 4 HOH A 8 508 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O17 F4G . . . C 3 4.729 56.7 16.587 1 113.19 ? O17 F4G 402 A 1 HETATM 2 C C16 F4G . . . C 3 4.259 56.708 15.454 1 105.19 ? C16 F4G 402 A 1 HETATM 3 N N18 F4G . . . C 3 3.026 57.168 15.239 1 105.35 ? N18 F4G 402 A 1 HETATM 4 C C1 F4G . . . C 3 5.092 56.214 14.289 1 97.15 ? C1 F4G 402 A 1 HETATM 5 C C6 F4G . . . C 3 5.015 56.861 13.047 1 76.23 ? C6 F4G 402 A 1 HETATM 6 C C5 F4G . . . C 3 5.797 56.385 12.008 1 80.63 ? C5 F4G 402 A 1 HETATM 7 C C4 F4G . . . C 3 6.642 55.277 12.216 1 97.21 ? C4 F4G 402 A 1 HETATM 8 N N3 F4G . . . C 3 6.749 54.604 13.402 1 106.25 ? N3 F4G 402 A 1 HETATM 9 C C9 F4G . . . C 3 7.446 53.511 13.837 1 102.66 ? C9 F4G 402 A 1 HETATM 10 C C8 F4G . . . C 3 7.167 53.272 15.178 1 98 ? C8 F4G 402 A 1 HETATM 11 N N7 F4G . . . C 3 6.267 54.212 15.535 1 97.03 ? N7 F4G 402 A 1 HETATM 12 C C2 F4G . . . C 3 6.01 55.023 14.461 1 101.78 ? C2 F4G 402 A 1 HETATM 13 C C10 F4G . . . C 3 8.43 52.796 12.942 1 94.9 ? C10 F4G 402 A 1 HETATM 14 C C15 F4G . . . C 3 9.086 53.46 11.894 1 83.95 ? C15 F4G 402 A 1 HETATM 15 C C14 F4G . . . C 3 10.032 52.779 11.137 1 85.15 ? C14 F4G 402 A 1 HETATM 16 C C13 F4G . . . C 3 10.315 51.446 11.455 1 94.6 ? C13 F4G 402 A 1 HETATM 17 N N12 F4G . . . C 3 9.688 50.817 12.47 1 92.77 ? N12 F4G 402 A 1 HETATM 18 C C11 F4G . . . C 3 8.771 51.461 13.221 1 89.88 ? C11 F4G 402 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 18 #