data_6CJG # _model_server_result.job_id E3-cEXrCYeLhoZiR3RCFMA _model_server_result.datetime_utc '2024-11-24 20:53:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cjg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 6CJG # _exptl.entry_id 6CJG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.375 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2-([1,1'-biphenyl]-4-yl)-3-methyl-1,7-naphthyridine-4-carboxylic acid" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CJG _cell.length_a 90.101 _cell.length_b 90.101 _cell.length_c 123.179 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CJG _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H16 N2 O2' _chem_comp.formula_weight 340.375 _chem_comp.id F51 _chem_comp.mon_nstd_flag . _chem_comp.name "2-([1,1'-biphenyl]-4-yl)-3-methyl-1,7-naphthyridine-4-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O06 C04 F51 doub 70 n n O05 C04 F51 sing 71 n n C04 C03 F51 sing 72 n n C01 C02 F51 sing 73 n n C03 C02 F51 doub 74 n y C03 C07 F51 sing 75 n y C02 C14 F51 sing 76 n y C16 C17 F51 doub 77 n y C16 C15 F51 sing 78 n y C08 C07 F51 doub 79 n y C08 C09 F51 sing 80 n y C07 C12 F51 sing 81 n y C17 C18 F51 sing 82 n y C14 C15 F51 sing 83 n n C14 N13 F51 doub 84 n y C15 C26 F51 doub 85 n y C24 C23 F51 doub 86 n y C24 C19 F51 sing 87 n y C23 C22 F51 sing 88 n y C09 N10 F51 doub 89 n y C18 C19 F51 sing 90 n n C18 C25 F51 doub 91 n y C12 N13 F51 sing 92 n y C12 C11 F51 doub 93 n y C19 C20 F51 doub 94 n y C26 C25 F51 sing 95 n y C22 C21 F51 doub 96 n y N10 C11 F51 sing 97 n y C20 C21 F51 sing 98 n y C11 H1 F51 sing 99 n n C01 H2 F51 sing 100 n n C01 H3 F51 sing 101 n n C01 H4 F51 sing 102 n n C08 H5 F51 sing 103 n n C09 H6 F51 sing 104 n n C16 H7 F51 sing 105 n n C17 H8 F51 sing 106 n n C20 H9 F51 sing 107 n n C21 H10 F51 sing 108 n n C22 H11 F51 sing 109 n n C23 H12 F51 sing 110 n n C24 H13 F51 sing 111 n n C25 H14 F51 sing 112 n n C26 H15 F51 sing 113 n n O05 H16 F51 sing 114 n n # _atom_sites.entry_id 6CJG _atom_sites.fract_transf_matrix[1][1] 0.011099 _atom_sites.fract_transf_matrix[1][2] 0.006408 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012816 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 501 501 FMN FMN . C 3 ORO A 1 502 1 ORO ORO . D 4 F51 A 1 503 1 F51 296 . E 5 GOL A 1 504 1 GOL GOL . F 6 SO4 A 1 505 1 SO4 SO4 . G 7 ZWI A 1 506 1 ZWI ZWI . H 8 HOH A 1 601 38 HOH HOH . H 8 HOH A 2 602 51 HOH HOH . H 8 HOH A 3 603 2 HOH HOH . H 8 HOH A 4 604 12 HOH HOH . H 8 HOH A 5 605 5 HOH HOH . H 8 HOH A 6 606 19 HOH HOH . H 8 HOH A 7 607 29 HOH HOH . H 8 HOH A 8 608 111 HOH HOH . H 8 HOH A 9 609 8 HOH HOH . H 8 HOH A 10 610 1 HOH HOH . H 8 HOH A 11 611 41 HOH HOH . H 8 HOH A 12 612 20 HOH HOH . H 8 HOH A 13 613 59 HOH HOH . H 8 HOH A 14 614 6 HOH HOH . H 8 HOH A 15 615 15 HOH HOH . H 8 HOH A 16 616 107 HOH HOH . H 8 HOH A 17 617 127 HOH HOH . H 8 HOH A 18 618 3 HOH HOH . H 8 HOH A 19 619 7 HOH HOH . H 8 HOH A 20 620 49 HOH HOH . H 8 HOH A 21 621 11 HOH HOH . H 8 HOH A 22 622 60 HOH HOH . H 8 HOH A 23 623 9 HOH HOH . H 8 HOH A 24 624 4 HOH HOH . H 8 HOH A 25 625 17 HOH HOH . H 8 HOH A 26 626 10 HOH HOH . H 8 HOH A 27 627 86 HOH HOH . H 8 HOH A 28 628 40 HOH HOH . H 8 HOH A 29 629 131 HOH HOH . H 8 HOH A 30 630 24 HOH HOH . H 8 HOH A 31 631 18 HOH HOH . H 8 HOH A 32 632 52 HOH HOH . H 8 HOH A 33 633 23 HOH HOH . H 8 HOH A 34 634 39 HOH HOH . H 8 HOH A 35 635 75 HOH HOH . H 8 HOH A 36 636 128 HOH HOH . H 8 HOH A 37 637 125 HOH HOH . H 8 HOH A 38 638 67 HOH HOH . H 8 HOH A 39 639 55 HOH HOH . H 8 HOH A 40 640 122 HOH HOH . H 8 HOH A 41 641 76 HOH HOH . H 8 HOH A 42 642 109 HOH HOH . H 8 HOH A 43 643 62 HOH HOH . H 8 HOH A 44 644 108 HOH HOH . H 8 HOH A 45 645 88 HOH HOH . H 8 HOH A 46 646 36 HOH HOH . H 8 HOH A 47 647 14 HOH HOH . H 8 HOH A 48 648 84 HOH HOH . H 8 HOH A 49 649 68 HOH HOH . H 8 HOH A 50 650 45 HOH HOH . H 8 HOH A 51 651 129 HOH HOH . H 8 HOH A 52 652 133 HOH HOH . H 8 HOH A 53 653 123 HOH HOH . H 8 HOH A 54 654 87 HOH HOH . H 8 HOH A 55 655 78 HOH HOH . H 8 HOH A 56 656 102 HOH HOH . H 8 HOH A 57 657 57 HOH HOH . H 8 HOH A 58 658 126 HOH HOH . H 8 HOH A 59 659 137 HOH HOH . H 8 HOH A 60 660 35 HOH HOH . H 8 HOH A 61 661 138 HOH HOH . H 8 HOH A 62 662 93 HOH HOH . H 8 HOH A 63 663 117 HOH HOH . H 8 HOH A 64 664 83 HOH HOH . H 8 HOH A 65 665 141 HOH HOH . H 8 HOH A 66 666 96 HOH HOH . H 8 HOH A 67 667 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N10 F51 . . . D 4 -3.09 39.238 -0.309 1 42.4 ? N10 F51 503 A 1 HETATM 2 C C11 F51 . . . D 4 -3.905 38.194 -0.302 1 40.37 ? C11 F51 503 A 1 HETATM 3 C C12 F51 . . . D 4 -4.197 37.482 -1.495 1 39.9 ? C12 F51 503 A 1 HETATM 4 C C01 F51 . . . D 4 -5.075 35.283 -5.082 1 43.82 ? C01 F51 503 A 1 HETATM 5 C C02 F51 . . . D 4 -4.788 36.044 -3.781 1 44.59 ? C02 F51 503 A 1 HETATM 6 C C03 F51 . . . D 4 -3.929 37.15 -3.871 1 46.61 ? C03 F51 503 A 1 HETATM 7 C C04 F51 . . . D 4 -3.327 37.502 -5.244 1 52.33 ? C04 F51 503 A 1 HETATM 8 C C07 F51 . . . D 4 -3.628 37.877 -2.685 1 39.67 ? C07 F51 503 A 1 HETATM 9 C C08 F51 . . . D 4 -2.752 38.984 -2.65 1 38.03 ? C08 F51 503 A 1 HETATM 10 C C09 F51 . . . D 4 -2.518 39.638 -1.437 1 35.16 ? C09 F51 503 A 1 HETATM 11 C C14 F51 . . . D 4 -5.309 35.678 -2.529 1 37.96 ? C14 F51 503 A 1 HETATM 12 C C15 F51 . . . D 4 -6.311 34.57 -2.229 1 41.37 ? C15 F51 503 A 1 HETATM 13 C C16 F51 . . . D 4 -7.417 34.376 -3.053 1 44.91 ? C16 F51 503 A 1 HETATM 14 C C17 F51 . . . D 4 -8.361 33.406 -2.762 1 41.76 ? C17 F51 503 A 1 HETATM 15 C C18 F51 . . . D 4 -8.223 32.653 -1.608 1 42.76 ? C18 F51 503 A 1 HETATM 16 C C19 F51 . . . D 4 -9.289 31.626 -1.262 1 41.24 ? C19 F51 503 A 1 HETATM 17 C C20 F51 . . . D 4 -9.795 31.655 0.032 1 43.63 ? C20 F51 503 A 1 HETATM 18 C C21 F51 . . . D 4 -10.776 30.754 0.421 1 48.97 ? C21 F51 503 A 1 HETATM 19 C C22 F51 . . . D 4 -11.271 29.843 -0.505 1 48.97 ? C22 F51 503 A 1 HETATM 20 C C23 F51 . . . D 4 -10.781 29.839 -1.806 1 52.13 ? C23 F51 503 A 1 HETATM 21 C C24 F51 . . . D 4 -9.792 30.738 -2.197 1 39.74 ? C24 F51 503 A 1 HETATM 22 C C25 F51 . . . D 4 -7.151 32.864 -0.749 1 41.68 ? C25 F51 503 A 1 HETATM 23 C C26 F51 . . . D 4 -6.197 33.834 -1.057 1 45 ? C26 F51 503 A 1 HETATM 24 N N13 F51 . . . D 4 -5.018 36.416 -1.472 1 38.94 ? N13 F51 503 A 1 HETATM 25 O O05 F51 . . . D 4 -2.132 37.191 -5.502 1 48.96 ? O05 F51 503 A 1 HETATM 26 O O06 F51 . . . D 4 -4.017 38.08 -6.133 1 53.98 ? O06 F51 503 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #