data_6CJP # _model_server_result.job_id g6CRZy50ibbWK0J9EwxChA _model_server_result.datetime_utc '2024-11-16 06:37:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cjp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6CJP # _exptl.entry_id 6CJP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 465.495 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1aR,2Z,4E,6E,14R,15aR)-9,11-dihydroxy-6-{[(4-methoxyphenyl)methoxy]imino}-14-methyl-1a,6,7,14,15,15a-hexahydro-12H-oxireno[e][2]benzoxacyclotetradecin-12-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.09 _cell.angle_gamma 90 _cell.entry_id 6CJP _cell.length_a 40.53 _cell.length_b 80.11 _cell.length_c 78.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CJP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C26 H27 N O7' _chem_comp.formula_weight 465.495 _chem_comp.id F5S _chem_comp.mon_nstd_flag . _chem_comp.name (1aR,2Z,4E,6E,14R,15aR)-9,11-dihydroxy-6-{[(4-methoxyphenyl)methoxy]imino}-14-methyl-1a,6,7,14,15,15a-hexahydro-12H-oxireno[e][2]benzoxacyclotetradecin-12-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 F5S sing 70 n n C34 C02 F5S doub 71 n y C34 C32 F5S sing 72 n y C02 C03 F5S sing 73 n y O08 C04 F5S doub 74 n n O33 C32 F5S sing 75 n n C32 C31 F5S doub 76 n y C03 C04 F5S sing 77 n n C03 C09 F5S doub 78 n y C04 O05 F5S sing 79 n n C31 C09 F5S sing 80 n y C09 C10 F5S sing 81 n n C19 C06 F5S sing 82 n n C19 C17 F5S sing 83 n n O05 C06 F5S sing 84 n n C06 C07 F5S sing 85 n n O18 C17 F5S sing 86 n n O18 C16 F5S sing 87 n n C28 O27 F5S sing 88 n n C17 C16 F5S sing 89 n n C10 C11 F5S sing 90 n n C29 C30 F5S doub 91 n y C29 C26 F5S sing 92 n y O27 C26 F5S sing 93 n n C30 C23 F5S sing 94 n y C13 C14 F5S sing 95 n n C13 C12 F5S doub 96 e n C26 C25 F5S doub 97 n y C15 C14 F5S doub 98 z n C11 C12 F5S sing 99 n n C11 N20 F5S doub 100 e n O21 N20 F5S sing 101 n n O21 C22 F5S sing 102 n n C23 C22 F5S sing 103 n n C23 C24 F5S doub 104 n y C25 C24 F5S sing 105 n y C10 H102 F5S sing 106 n n C10 H101 F5S sing 107 n n C13 H131 F5S sing 108 n n C15 H151 F5S sing 109 n n C17 H171 F5S sing 110 n n C22 H222 F5S sing 111 n n C22 H221 F5S sing 112 n n C24 H241 F5S sing 113 n n C28 H282 F5S sing 114 n n C28 H281 F5S sing 115 n n C28 H283 F5S sing 116 n n O01 H011 F5S sing 117 n n C06 H061 F5S sing 118 n n C07 H073 F5S sing 119 n n C07 H071 F5S sing 120 n n C07 H072 F5S sing 121 n n C12 H121 F5S sing 122 n n C14 H141 F5S sing 123 n n C16 H2 F5S sing 124 n n C19 H192 F5S sing 125 n n C19 H191 F5S sing 126 n n C25 H251 F5S sing 127 n n C29 H291 F5S sing 128 n n C30 H301 F5S sing 129 n n C31 H311 F5S sing 130 n n O33 H331 F5S sing 131 n n C34 H341 F5S sing 132 n n C16 C15 F5S sing 133 n n # _atom_sites.entry_id 6CJP _atom_sites.fract_transf_matrix[1][1] 0.024673 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006653 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013244 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 F5S A 1 301 1 F5S LIG . D 2 F5S B 1 301 2 F5S LIG . E 3 HOH A 1 401 1 HOH HOH . E 3 HOH A 2 402 7 HOH HOH . E 3 HOH A 3 403 29 HOH HOH . E 3 HOH A 4 404 4 HOH HOH . E 3 HOH A 5 405 15 HOH HOH . E 3 HOH A 6 406 19 HOH HOH . E 3 HOH A 7 407 5 HOH HOH . E 3 HOH A 8 408 9 HOH HOH . E 3 HOH A 9 409 13 HOH HOH . E 3 HOH A 10 410 6 HOH HOH . E 3 HOH A 11 411 12 HOH HOH . E 3 HOH A 12 412 25 HOH HOH . E 3 HOH A 13 413 21 HOH HOH . E 3 HOH A 14 414 24 HOH HOH . F 3 HOH B 1 401 28 HOH HOH . F 3 HOH B 2 402 10 HOH HOH . F 3 HOH B 3 403 18 HOH HOH . F 3 HOH B 4 404 2 HOH HOH . F 3 HOH B 5 405 22 HOH HOH . F 3 HOH B 6 406 30 HOH HOH . F 3 HOH B 7 407 16 HOH HOH . F 3 HOH B 8 408 8 HOH HOH . F 3 HOH B 9 409 11 HOH HOH . F 3 HOH B 10 410 3 HOH HOH . F 3 HOH B 11 411 20 HOH HOH . F 3 HOH B 12 412 26 HOH HOH . F 3 HOH B 13 413 14 HOH HOH . F 3 HOH B 14 414 17 HOH HOH . F 3 HOH B 15 415 27 HOH HOH . F 3 HOH B 16 416 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 F5S . . . D 2 9.319 21.2 9.187 1 45.67 ? C10 F5S 301 B 1 HETATM 2 C C13 F5S . . . D 2 6.829 22.773 8.084 1 55.91 ? C13 F5S 301 B 1 HETATM 3 C C15 F5S . . . D 2 4.245 23.049 7.839 1 51.64 ? C15 F5S 301 B 1 HETATM 4 C C17 F5S . . . D 2 3.759 20.62 9.458 1 57.69 ? C17 F5S 301 B 1 HETATM 5 C C22 F5S . . . D 2 12.507 21.711 6.528 1 61.79 ? C22 F5S 301 B 1 HETATM 6 C C24 F5S . . . D 2 13.139 24.109 6.113 1 39.91 ? C24 F5S 301 B 1 HETATM 7 C C26 F5S . . . D 2 13.904 25.524 7.908 1 47.82 ? C26 F5S 301 B 1 HETATM 8 C C28 F5S . . . D 2 14.049 27.936 7.672 1 53.99 ? C28 F5S 301 B 1 HETATM 9 O O01 F5S . . . D 2 7.641 23.173 13.48 1 29.4 ? O01 F5S 301 B 1 HETATM 10 C C02 F5S . . . D 2 8.55 23.209 12.4 1 31.64 ? C02 F5S 301 B 1 HETATM 11 C C03 F5S . . . D 2 8.468 22.235 11.402 1 39.93 ? C03 F5S 301 B 1 HETATM 12 C C04 F5S . . . D 2 7.377 21.166 11.527 1 38.62 ? C04 F5S 301 B 1 HETATM 13 O O05 F5S . . . D 2 6.632 20.805 10.374 1 46.87 ? O05 F5S 301 B 1 HETATM 14 C C06 F5S . . . D 2 5.812 19.674 10.488 1 49.66 ? C06 F5S 301 B 1 HETATM 15 C C07 F5S . . . D 2 5.908 18.827 9.221 1 44.35 ? C07 F5S 301 B 1 HETATM 16 O O08 F5S . . . D 2 7.153 20.654 12.61 1 37.7 ? O08 F5S 301 B 1 HETATM 17 C C09 F5S . . . D 2 9.365 22.26 10.317 1 38.16 ? C09 F5S 301 B 1 HETATM 18 C C11 F5S . . . D 2 9.192 21.81 7.78 1 52.35 ? C11 F5S 301 B 1 HETATM 19 C C12 F5S . . . D 2 7.843 22.351 7.259 1 42.86 ? C12 F5S 301 B 1 HETATM 20 C C14 F5S . . . D 2 5.53 23.302 7.436 1 48.19 ? C14 F5S 301 B 1 HETATM 21 C C16 F5S . . . D 2 3.881 22.115 9.18 1 49.84 ? C16 F5S 301 B 1 HETATM 22 O O18 F5S . . . D 2 2.545 21.491 9.569 1 71.84 ? O18 F5S 301 B 1 HETATM 23 C C19 F5S . . . D 2 4.4 20.156 10.714 1 41.59 ? C19 F5S 301 B 1 HETATM 24 N N20 F5S . . . D 2 10.255 21.822 6.978 1 45.49 ? N20 F5S 301 B 1 HETATM 25 O O21 F5S . . . D 2 11.461 21.314 7.414 1 63.68 ? O21 F5S 301 B 1 HETATM 26 C C23 F5S . . . D 2 13.006 23.061 7.018 1 53 ? C23 F5S 301 B 1 HETATM 27 C C25 F5S . . . D 2 13.59 25.342 6.563 1 42.91 ? C25 F5S 301 B 1 HETATM 28 O O27 F5S . . . D 2 14.368 26.763 8.394 1 55.88 ? O27 F5S 301 B 1 HETATM 29 C C29 F5S . . . D 2 13.776 24.473 8.812 1 43.53 ? C29 F5S 301 B 1 HETATM 30 C C30 F5S . . . D 2 13.325 23.237 8.366 1 51.61 ? C30 F5S 301 B 1 HETATM 31 C C31 F5S . . . D 2 10.339 23.264 10.255 1 39.92 ? C31 F5S 301 B 1 HETATM 32 C C32 F5S . . . D 2 10.418 24.239 11.26 1 38.17 ? C32 F5S 301 B 1 HETATM 33 O O33 F5S . . . D 2 11.398 25.256 11.198 1 43.66 ? O33 F5S 301 B 1 HETATM 34 C C34 F5S . . . D 2 9.521 24.211 12.331 1 35.25 ? C34 F5S 301 B 1 HETATM 35 H H102 F5S . . . D 2 8.549 20.607 9.343 1 54.8 ? H102 F5S 301 B 1 HETATM 36 H H101 F5S . . . D 2 10.14 20.666 9.224 1 54.8 ? H101 F5S 301 B 1 HETATM 37 H H131 F5S . . . D 2 6.929 22.743 9.062 1 67.1 ? H131 F5S 301 B 1 HETATM 38 H H151 F5S . . . D 2 3.508 23.45 7.333 1 61.97 ? H151 F5S 301 B 1 HETATM 39 H H171 F5S . . . D 2 3.788 20.042 8.664 1 69.22 ? H171 F5S 301 B 1 HETATM 40 H H222 F5S . . . D 2 12.158 21.792 5.611 1 74.14 ? H222 F5S 301 B 1 HETATM 41 H H221 F5S . . . D 2 13.235 21.055 6.554 1 74.14 ? H221 F5S 301 B 1 HETATM 42 H H241 F5S . . . D 2 12.912 23.979 5.168 1 47.89 ? H241 F5S 301 B 1 HETATM 43 H H282 F5S . . . D 2 13.352 27.734 7.009 1 64.78 ? H282 F5S 301 B 1 HETATM 44 H H281 F5S . . . D 2 14.852 28.266 7.212 1 64.78 ? H281 F5S 301 B 1 HETATM 45 H H283 F5S . . . D 2 13.722 28.623 8.292 1 64.78 ? H283 F5S 301 B 1 HETATM 46 H H011 F5S . . . D 2 7.677 22.371 13.874 1 35.28 ? H011 F5S 301 B 1 HETATM 47 H H061 F5S . . . D 2 6.101 19.14 11.258 1 59.6 ? H061 F5S 301 B 1 HETATM 48 H H073 F5S . . . D 2 6.727 18.281 9.252 1 53.22 ? H073 F5S 301 B 1 HETATM 49 H H071 F5S . . . D 2 5.937 19.416 8.434 1 53.22 ? H071 F5S 301 B 1 HETATM 50 H H072 F5S . . . D 2 5.123 18.237 9.16 1 53.22 ? H072 F5S 301 B 1 HETATM 51 H H121 F5S . . . D 2 7.705 22.401 6.289 1 51.43 ? H121 F5S 301 B 1 HETATM 52 H H141 F5S . . . D 2 5.636 23.861 6.638 1 57.82 ? H141 F5S 301 B 1 HETATM 53 H H2 F5S . . . D 2 4.419 22.807 9.614 1 59.81 ? H2 F5S 301 B 1 HETATM 54 H H192 F5S . . . D 2 4.416 20.898 11.357 1 49.9 ? H192 F5S 301 B 1 HETATM 55 H H191 F5S . . . D 2 3.868 19.419 11.09 1 49.9 ? H191 F5S 301 B 1 HETATM 56 H H251 F5S . . . D 2 13.685 26.089 5.932 1 51.49 ? H251 F5S 301 B 1 HETATM 57 H H291 F5S . . . D 2 14.001 24.606 9.759 1 52.24 ? H291 F5S 301 B 1 HETATM 58 H H301 F5S . . . D 2 13.227 22.493 8.996 1 61.93 ? H301 F5S 301 B 1 HETATM 59 H H311 F5S . . . D 2 10.969 23.286 9.505 1 47.91 ? H311 F5S 301 B 1 HETATM 60 H H331 F5S . . . D 2 11.013 26.048 11.333 1 52.39 ? H331 F5S 301 B 1 HETATM 61 H H341 F5S . . . D 2 9.575 24.894 13.038 1 42.3 ? H341 F5S 301 B 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 61 #