data_6CJU # _model_server_result.job_id zJPPdQOrZNk6qxO825U1Ww _model_server_result.datetime_utc '2025-03-06 09:08:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cju # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"FA","auth_seq_id":500}' # _entry.id 6CJU # _exptl.entry_id 6CJU _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 329.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CJU _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CJU _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 N N N ? 2 W N N ? 2 FA N N # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 6CJU _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CMP A 1 500 500 CMP CMP . F 3 PGW A 1 501 501 PGW PGW . G 3 PGW A 1 502 502 PGW PGW . H 3 PGW A 1 503 503 PGW PGW . I 3 PGW A 1 504 504 PGW PGW . J 3 PGW A 1 505 505 PGW PGW . K 3 PGW A 1 506 506 PGW PGW . L 3 PGW A 1 507 507 PGW PGW . M 3 PGW A 1 508 508 PGW PGW . N 2 CMP B 1 500 500 CMP CMP . O 3 PGW B 1 501 501 PGW PGW . P 3 PGW B 1 502 502 PGW PGW . Q 3 PGW B 1 503 503 PGW PGW . R 3 PGW B 1 504 504 PGW PGW . S 3 PGW B 1 505 505 PGW PGW . T 3 PGW B 1 506 506 PGW PGW . U 3 PGW B 1 507 507 PGW PGW . V 3 PGW B 1 508 508 PGW PGW . W 2 CMP C 1 500 500 CMP CMP . X 3 PGW C 1 501 501 PGW PGW . Y 3 PGW C 1 502 502 PGW PGW . Z 3 PGW C 1 503 503 PGW PGW . AA 3 PGW C 1 504 504 PGW PGW . BA 3 PGW C 1 505 505 PGW PGW . CA 3 PGW C 1 506 506 PGW PGW . DA 3 PGW C 1 507 507 PGW PGW . EA 3 PGW C 1 508 508 PGW PGW . FA 2 CMP D 1 500 500 CMP CMP . GA 3 PGW D 1 501 501 PGW PGW . HA 3 PGW D 1 502 502 PGW PGW . IA 3 PGW D 1 503 503 PGW PGW . JA 3 PGW D 1 504 504 PGW PGW . KA 3 PGW D 1 505 505 PGW PGW . LA 3 PGW D 1 506 506 PGW PGW . MA 3 PGW D 1 507 507 PGW PGW . NA 3 PGW D 1 508 508 PGW PGW . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . FA 2 130.918 166.131 177.588 1 94.5 ? P CMP 500 D 1 HETATM 2 O O1P CMP . . . FA 2 131.098 164.976 176.65 1 94.5 ? O1P CMP 500 D 1 HETATM 3 O O2P CMP . . . FA 2 130.875 165.859 179.065 1 94.5 ? O2P CMP 500 D 1 HETATM 4 O O5' CMP . . . FA 2 129.565 166.885 177.166 1 94.5 ? O5' CMP 500 D 1 HETATM 5 C C5' CMP . . . FA 2 129.481 167.649 175.963 1 94.5 ? C5' CMP 500 D 1 HETATM 6 C C4' CMP . . . FA 2 130.873 168.106 175.573 1 94.5 ? C4' CMP 500 D 1 HETATM 7 O O4' CMP . . . FA 2 130.903 169.299 174.795 1 94.5 ? O4' CMP 500 D 1 HETATM 8 C C3' CMP . . . FA 2 131.653 168.447 176.807 1 94.5 ? C3' CMP 500 D 1 HETATM 9 O O3' CMP . . . FA 2 132.076 167.205 177.314 1 94.5 ? O3' CMP 500 D 1 HETATM 10 C C2' CMP . . . FA 2 132.749 169.314 176.267 1 94.5 ? C2' CMP 500 D 1 HETATM 11 O O2' CMP . . . FA 2 133.781 168.481 175.755 1 94.5 ? O2' CMP 500 D 1 HETATM 12 C C1' CMP . . . FA 2 132.066 170.053 175.136 1 94.5 ? C1' CMP 500 D 1 HETATM 13 N N9 CMP . . . FA 2 131.659 171.356 175.691 1 94.5 ? N9 CMP 500 D 1 HETATM 14 C C8 CMP . . . FA 2 130.778 171.53 176.688 1 94.5 ? C8 CMP 500 D 1 HETATM 15 N N7 CMP . . . FA 2 130.626 172.843 176.981 1 94.5 ? N7 CMP 500 D 1 HETATM 16 C C5 CMP . . . FA 2 131.434 173.532 176.158 1 94.5 ? C5 CMP 500 D 1 HETATM 17 C C6 CMP . . . FA 2 131.763 174.955 175.934 1 94.5 ? C6 CMP 500 D 1 HETATM 18 N N6 CMP . . . FA 2 131.181 175.93 176.67 1 94.5 ? N6 CMP 500 D 1 HETATM 19 N N1 CMP . . . FA 2 132.663 175.25 174.973 1 94.5 ? N1 CMP 500 D 1 HETATM 20 C C2 CMP . . . FA 2 133.247 174.291 174.238 1 94.5 ? C2 CMP 500 D 1 HETATM 21 N N3 CMP . . . FA 2 132.995 172.981 174.389 1 94.5 ? N3 CMP 500 D 1 HETATM 22 C C4 CMP . . . FA 2 132.114 172.545 175.313 1 94.5 ? C4 CMP 500 D 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #