data_6CK0
#
_model_server_result.job_id            ms8IN3eE1h1griun4BVHcg 
_model_server_result.datetime_utc      '2024-12-26 17:29:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ck0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    6CK0 
#
_exptl.entry_id    6CK0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         122.14 
_cell.angle_beta          94.73 
_cell.angle_gamma         107.85 
_cell.entry_id            6CK0 
_cell.length_a            52.89 
_cell.length_b            57.08 
_cell.length_c            57.03 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CK0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,M 1 1 
B,F,G,H,I,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6CK0 
_atom_sites.fract_transf_matrix[1][1]    0.018907 
_atom_sites.fract_transf_matrix[1][2]    0.006089 
_atom_sites.fract_transf_matrix[1][3]    0.006354 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018405 
_atom_sites.fract_transf_matrix[2][3]    0.01336 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021741 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 F5D A 1 301 300 F5D LIG . 
D 3 SO4 A 1 302 1 SO4 SO4 . 
E 4 EDO A 1 303 4 EDO EDO . 
F 2 F5D B 1 301 300 F5D LIG . 
G 3 SO4 B 1 302 2 SO4 SO4 . 
H 3 SO4 B 1 303 3 SO4 SO4 . 
I 3 SO4 B 1 304 4 SO4 SO4 . 
J 4 EDO B 1 305 1 EDO EDO . 
K 4 EDO B 1 306 2 EDO EDO . 
L 4 EDO B 1 307 3 EDO EDO . 
M 5 HOH A 1 401 101 HOH HOH . 
M 5 HOH A 2 402 114 HOH HOH . 
M 5 HOH A 3 403 47 HOH HOH . 
M 5 HOH A 4 404 89 HOH HOH . 
M 5 HOH A 5 405 66 HOH HOH . 
M 5 HOH A 6 406 13 HOH HOH . 
M 5 HOH A 7 407 8 HOH HOH . 
M 5 HOH A 8 408 30 HOH HOH . 
M 5 HOH A 9 409 52 HOH HOH . 
M 5 HOH A 10 410 23 HOH HOH . 
M 5 HOH A 11 411 31 HOH HOH . 
M 5 HOH A 12 412 98 HOH HOH . 
M 5 HOH A 13 413 49 HOH HOH . 
M 5 HOH A 14 414 5 HOH HOH . 
M 5 HOH A 15 415 46 HOH HOH . 
M 5 HOH A 16 416 2 HOH HOH . 
M 5 HOH A 17 417 53 HOH HOH . 
M 5 HOH A 18 418 85 HOH HOH . 
M 5 HOH A 19 419 34 HOH HOH . 
M 5 HOH A 20 420 54 HOH HOH . 
M 5 HOH A 21 421 99 HOH HOH . 
M 5 HOH A 22 422 33 HOH HOH . 
M 5 HOH A 23 423 32 HOH HOH . 
M 5 HOH A 24 424 78 HOH HOH . 
M 5 HOH A 25 425 51 HOH HOH . 
M 5 HOH A 26 426 93 HOH HOH . 
M 5 HOH A 27 427 79 HOH HOH . 
M 5 HOH A 28 428 26 HOH HOH . 
M 5 HOH A 29 429 100 HOH HOH . 
M 5 HOH A 30 430 24 HOH HOH . 
M 5 HOH A 31 431 90 HOH HOH . 
M 5 HOH A 32 432 35 HOH HOH . 
M 5 HOH A 33 433 76 HOH HOH . 
M 5 HOH A 34 434 38 HOH HOH . 
M 5 HOH A 35 435 73 HOH HOH . 
M 5 HOH A 36 436 27 HOH HOH . 
M 5 HOH A 37 437 67 HOH HOH . 
M 5 HOH A 38 438 56 HOH HOH . 
M 5 HOH A 39 439 69 HOH HOH . 
M 5 HOH A 40 440 42 HOH HOH . 
M 5 HOH A 41 441 68 HOH HOH . 
M 5 HOH A 42 442 92 HOH HOH . 
M 5 HOH A 43 443 71 HOH HOH . 
M 5 HOH A 44 444 91 HOH HOH . 
M 5 HOH A 45 445 55 HOH HOH . 
M 5 HOH A 46 446 44 HOH HOH . 
M 5 HOH A 47 447 50 HOH HOH . 
M 5 HOH A 48 448 58 HOH HOH . 
M 5 HOH A 49 449 7 HOH HOH . 
M 5 HOH A 50 450 72 HOH HOH . 
M 5 HOH A 51 451 96 HOH HOH . 
M 5 HOH A 52 452 48 HOH HOH . 
M 5 HOH A 53 453 94 HOH HOH . 
N 5 HOH B 1 401 105 HOH HOH . 
N 5 HOH B 2 402 115 HOH HOH . 
N 5 HOH B 3 403 102 HOH HOH . 
N 5 HOH B 4 404 41 HOH HOH . 
N 5 HOH B 5 405 103 HOH HOH . 
N 5 HOH B 6 406 43 HOH HOH . 
N 5 HOH B 7 407 75 HOH HOH . 
N 5 HOH B 8 408 15 HOH HOH . 
N 5 HOH B 9 409 19 HOH HOH . 
N 5 HOH B 10 410 113 HOH HOH . 
N 5 HOH B 11 411 25 HOH HOH . 
N 5 HOH B 12 412 16 HOH HOH . 
N 5 HOH B 13 413 22 HOH HOH . 
N 5 HOH B 14 414 6 HOH HOH . 
N 5 HOH B 15 415 108 HOH HOH . 
N 5 HOH B 16 416 109 HOH HOH . 
N 5 HOH B 17 417 70 HOH HOH . 
N 5 HOH B 18 418 1 HOH HOH . 
N 5 HOH B 19 419 9 HOH HOH . 
N 5 HOH B 20 420 3 HOH HOH . 
N 5 HOH B 21 421 106 HOH HOH . 
N 5 HOH B 22 422 37 HOH HOH . 
N 5 HOH B 23 423 57 HOH HOH . 
N 5 HOH B 24 424 11 HOH HOH . 
N 5 HOH B 25 425 40 HOH HOH . 
N 5 HOH B 26 426 112 HOH HOH . 
N 5 HOH B 27 427 4 HOH HOH . 
N 5 HOH B 28 428 77 HOH HOH . 
N 5 HOH B 29 429 28 HOH HOH . 
N 5 HOH B 30 430 36 HOH HOH . 
N 5 HOH B 31 431 64 HOH HOH . 
N 5 HOH B 32 432 61 HOH HOH . 
N 5 HOH B 33 433 12 HOH HOH . 
N 5 HOH B 34 434 10 HOH HOH . 
N 5 HOH B 35 435 74 HOH HOH . 
N 5 HOH B 36 436 17 HOH HOH . 
N 5 HOH B 37 437 87 HOH HOH . 
N 5 HOH B 38 438 88 HOH HOH . 
N 5 HOH B 39 439 95 HOH HOH . 
N 5 HOH B 40 440 80 HOH HOH . 
N 5 HOH B 41 441 21 HOH HOH . 
N 5 HOH B 42 442 82 HOH HOH . 
N 5 HOH B 43 443 97 HOH HOH . 
N 5 HOH B 44 444 83 HOH HOH . 
N 5 HOH B 45 445 14 HOH HOH . 
N 5 HOH B 46 446 59 HOH HOH . 
N 5 HOH B 47 447 60 HOH HOH . 
N 5 HOH B 48 448 63 HOH HOH . 
N 5 HOH B 49 449 81 HOH HOH . 
N 5 HOH B 50 450 45 HOH HOH . 
N 5 HOH B 51 451 84 HOH HOH . 
N 5 HOH B 52 452 110 HOH HOH . 
N 5 HOH B 53 453 39 HOH HOH . 
N 5 HOH B 54 454 62 HOH HOH . 
N 5 HOH B 55 455 86 HOH HOH . 
N 5 HOH B 56 456 29 HOH HOH . 
N 5 HOH B 57 457 18 HOH HOH . 
N 5 HOH B 58 458 111 HOH HOH . 
N 5 HOH B 59 459 104 HOH HOH . 
N 5 HOH B 60 460 65 HOH HOH . 
N 5 HOH B 61 461 107 HOH HOH . 
N 5 HOH B 62 462 20 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 4 10.119 27.566 35.412 1 52.61 ? C1 EDO 303 A 1 
HETATM 2 O O1 EDO . . . E 4 10.941 26.819 34.504 1 49.5 ? O1 EDO 303 A 1 
HETATM 3 C C2 EDO . . . E 4 10.916 28.655 36.124 1 56.81 ? C2 EDO 303 A 1 
HETATM 4 O O2 EDO . . . E 4 11.74 28.084 37.149 1 58.09 ? O2 EDO 303 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#