data_6CK8
#
_model_server_result.job_id            nUJZTknPZhk34SexPzDs7Q 
_model_server_result.datetime_utc      '2024-10-17 03:24:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ck8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":209}' 
#
_entry.id    6CK8 
#
_exptl.entry_id    6CK8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.62 
_cell.angle_gamma         90 
_cell.entry_id            6CK8 
_cell.length_a            118.018 
_cell.length_b            75.267 
_cell.length_c            57.25 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CK8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I,J,K,L,AA 1 1 
B,M,N,O,P,Q,R,S,T,U,BA 2 1 
C,V,W,X,Y,Z,CA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 K N N 
? 4 L N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 166 n n 
C1 C2 GOL sing 167 n n 
C1 H11 GOL sing 168 n n 
C1 H12 GOL sing 169 n n 
O1 HO1 GOL sing 170 n n 
C2 O2 GOL sing 171 n n 
C2 C3 GOL sing 172 n n 
C2 H2 GOL sing 173 n n 
O2 HO2 GOL sing 174 n n 
C3 O3 GOL sing 175 n n 
C3 H31 GOL sing 176 n n 
C3 H32 GOL sing 177 n n 
O3 HO3 GOL sing 178 n n 
#
_atom_sites.entry_id                     6CK8 
_atom_sites.fract_transf_matrix[1][1]    0.008473 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000388 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013286 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017486 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 SO4 A 1 201 1 SO4 SO4 . 
E 2 SO4 A 1 202 2 SO4 SO4 . 
F 2 SO4 A 1 203 8 SO4 SO4 . 
G 2 SO4 A 1 204 10 SO4 SO4 . 
H 3 1PE A 1 205 1 1PE 1PE . 
I 3 1PE A 1 206 2 1PE 1PE . 
J 3 1PE A 1 207 7 1PE 1PE . 
K 4 GOL A 1 208 1 GOL GOL . 
L 4 GOL A 1 209 2 GOL GOL . 
M 2 SO4 B 1 201 3 SO4 SO4 . 
N 2 SO4 B 1 202 4 SO4 SO4 . 
O 2 SO4 B 1 203 7 SO4 SO4 . 
P 2 SO4 B 1 204 11 SO4 SO4 . 
Q 2 SO4 B 1 205 12 SO4 SO4 . 
R 2 SO4 B 1 206 13 SO4 SO4 . 
S 3 1PE B 1 207 3 1PE 1PE . 
T 3 1PE B 1 208 4 1PE 1PE . 
U 3 1PE B 1 209 6 1PE 1PE . 
V 2 SO4 C 1 201 5 SO4 SO4 . 
W 2 SO4 C 1 202 6 SO4 SO4 . 
X 2 SO4 C 1 203 9 SO4 SO4 . 
Y 2 SO4 C 1 204 14 SO4 SO4 . 
Z 3 1PE C 1 205 5 1PE 1PE . 
AA 5 HOH A 1 301 109 HOH HOH . 
AA 5 HOH A 2 302 22 HOH HOH . 
AA 5 HOH A 3 303 155 HOH HOH . 
AA 5 HOH A 4 304 127 HOH HOH . 
AA 5 HOH A 5 305 6 HOH HOH . 
AA 5 HOH A 6 306 4 HOH HOH . 
AA 5 HOH A 7 307 8 HOH HOH . 
AA 5 HOH A 8 308 5 HOH HOH . 
AA 5 HOH A 9 309 26 HOH HOH . 
AA 5 HOH A 10 310 73 HOH HOH . 
AA 5 HOH A 11 311 82 HOH HOH . 
AA 5 HOH A 12 312 12 HOH HOH . 
AA 5 HOH A 13 313 18 HOH HOH . 
AA 5 HOH A 14 314 54 HOH HOH . 
AA 5 HOH A 15 315 45 HOH HOH . 
AA 5 HOH A 16 316 16 HOH HOH . 
AA 5 HOH A 17 317 81 HOH HOH . 
AA 5 HOH A 18 318 17 HOH HOH . 
AA 5 HOH A 19 319 35 HOH HOH . 
AA 5 HOH A 20 320 105 HOH HOH . 
AA 5 HOH A 21 321 34 HOH HOH . 
AA 5 HOH A 22 322 80 HOH HOH . 
AA 5 HOH A 23 323 110 HOH HOH . 
AA 5 HOH A 24 324 66 HOH HOH . 
AA 5 HOH A 25 325 39 HOH HOH . 
AA 5 HOH A 26 326 125 HOH HOH . 
AA 5 HOH A 27 327 102 HOH HOH . 
AA 5 HOH A 28 328 68 HOH HOH . 
AA 5 HOH A 29 329 2 HOH HOH . 
AA 5 HOH A 30 330 9 HOH HOH . 
AA 5 HOH A 31 331 77 HOH HOH . 
AA 5 HOH A 32 332 21 HOH HOH . 
AA 5 HOH A 33 333 123 HOH HOH . 
AA 5 HOH A 34 334 85 HOH HOH . 
AA 5 HOH A 35 335 148 HOH HOH . 
AA 5 HOH A 36 336 98 HOH HOH . 
AA 5 HOH A 37 337 89 HOH HOH . 
AA 5 HOH A 38 338 1 HOH HOH . 
AA 5 HOH A 39 339 95 HOH HOH . 
AA 5 HOH A 40 340 91 HOH HOH . 
AA 5 HOH A 41 341 36 HOH HOH . 
AA 5 HOH A 42 342 29 HOH HOH . 
AA 5 HOH A 43 343 133 HOH HOH . 
AA 5 HOH A 44 344 70 HOH HOH . 
AA 5 HOH A 45 345 96 HOH HOH . 
AA 5 HOH A 46 346 99 HOH HOH . 
AA 5 HOH A 47 347 113 HOH HOH . 
AA 5 HOH A 48 348 86 HOH HOH . 
AA 5 HOH A 49 349 94 HOH HOH . 
AA 5 HOH A 50 350 112 HOH HOH . 
AA 5 HOH A 51 351 134 HOH HOH . 
AA 5 HOH A 52 352 49 HOH HOH . 
AA 5 HOH A 53 353 158 HOH HOH . 
AA 5 HOH A 54 354 84 HOH HOH . 
AA 5 HOH A 55 355 129 HOH HOH . 
AA 5 HOH A 56 356 104 HOH HOH . 
AA 5 HOH A 57 357 50 HOH HOH . 
AA 5 HOH A 58 358 97 HOH HOH . 
AA 5 HOH A 59 359 108 HOH HOH . 
AA 5 HOH A 60 360 101 HOH HOH . 
AA 5 HOH A 61 361 40 HOH HOH . 
BA 5 HOH B 1 301 147 HOH HOH . 
BA 5 HOH B 2 302 56 HOH HOH . 
BA 5 HOH B 3 303 44 HOH HOH . 
BA 5 HOH B 4 304 162 HOH HOH . 
BA 5 HOH B 5 305 11 HOH HOH . 
BA 5 HOH B 6 306 72 HOH HOH . 
BA 5 HOH B 7 307 27 HOH HOH . 
BA 5 HOH B 8 308 117 HOH HOH . 
BA 5 HOH B 9 309 78 HOH HOH . 
BA 5 HOH B 10 310 64 HOH HOH . 
BA 5 HOH B 11 311 130 HOH HOH . 
BA 5 HOH B 12 312 88 HOH HOH . 
BA 5 HOH B 13 313 154 HOH HOH . 
BA 5 HOH B 14 314 114 HOH HOH . 
BA 5 HOH B 15 315 67 HOH HOH . 
BA 5 HOH B 16 316 140 HOH HOH . 
BA 5 HOH B 17 317 13 HOH HOH . 
BA 5 HOH B 18 318 23 HOH HOH . 
BA 5 HOH B 19 319 24 HOH HOH . 
BA 5 HOH B 20 320 25 HOH HOH . 
BA 5 HOH B 21 321 63 HOH HOH . 
BA 5 HOH B 22 322 76 HOH HOH . 
BA 5 HOH B 23 323 83 HOH HOH . 
BA 5 HOH B 24 324 15 HOH HOH . 
BA 5 HOH B 25 325 75 HOH HOH . 
BA 5 HOH B 26 326 153 HOH HOH . 
BA 5 HOH B 27 327 42 HOH HOH . 
BA 5 HOH B 28 328 14 HOH HOH . 
BA 5 HOH B 29 329 136 HOH HOH . 
BA 5 HOH B 30 330 57 HOH HOH . 
BA 5 HOH B 31 331 62 HOH HOH . 
BA 5 HOH B 32 332 157 HOH HOH . 
BA 5 HOH B 33 333 38 HOH HOH . 
BA 5 HOH B 34 334 87 HOH HOH . 
BA 5 HOH B 35 335 79 HOH HOH . 
BA 5 HOH B 36 336 28 HOH HOH . 
BA 5 HOH B 37 337 161 HOH HOH . 
BA 5 HOH B 38 338 93 HOH HOH . 
BA 5 HOH B 39 339 137 HOH HOH . 
BA 5 HOH B 40 340 37 HOH HOH . 
BA 5 HOH B 41 341 160 HOH HOH . 
BA 5 HOH B 42 342 74 HOH HOH . 
BA 5 HOH B 43 343 116 HOH HOH . 
BA 5 HOH B 44 344 69 HOH HOH . 
BA 5 HOH B 45 345 111 HOH HOH . 
BA 5 HOH B 46 346 71 HOH HOH . 
BA 5 HOH B 47 347 141 HOH HOH . 
BA 5 HOH B 48 348 124 HOH HOH . 
BA 5 HOH B 49 349 135 HOH HOH . 
BA 5 HOH B 50 350 159 HOH HOH . 
BA 5 HOH B 51 351 121 HOH HOH . 
BA 5 HOH B 52 352 131 HOH HOH . 
BA 5 HOH B 53 353 90 HOH HOH . 
BA 5 HOH B 54 354 118 HOH HOH . 
BA 5 HOH B 55 355 156 HOH HOH . 
BA 5 HOH B 56 356 138 HOH HOH . 
CA 5 HOH C 1 301 59 HOH HOH . 
CA 5 HOH C 2 302 20 HOH HOH . 
CA 5 HOH C 3 303 7 HOH HOH . 
CA 5 HOH C 4 304 92 HOH HOH . 
CA 5 HOH C 5 305 58 HOH HOH . 
CA 5 HOH C 6 306 19 HOH HOH . 
CA 5 HOH C 7 307 30 HOH HOH . 
CA 5 HOH C 8 308 48 HOH HOH . 
CA 5 HOH C 9 309 60 HOH HOH . 
CA 5 HOH C 10 310 103 HOH HOH . 
CA 5 HOH C 11 311 43 HOH HOH . 
CA 5 HOH C 12 312 52 HOH HOH . 
CA 5 HOH C 13 313 41 HOH HOH . 
CA 5 HOH C 14 314 51 HOH HOH . 
CA 5 HOH C 15 315 31 HOH HOH . 
CA 5 HOH C 16 316 3 HOH HOH . 
CA 5 HOH C 17 317 46 HOH HOH . 
CA 5 HOH C 18 318 126 HOH HOH . 
CA 5 HOH C 19 319 65 HOH HOH . 
CA 5 HOH C 20 320 149 HOH HOH . 
CA 5 HOH C 21 321 33 HOH HOH . 
CA 5 HOH C 22 322 61 HOH HOH . 
CA 5 HOH C 23 323 10 HOH HOH . 
CA 5 HOH C 24 324 128 HOH HOH . 
CA 5 HOH C 25 325 107 HOH HOH . 
CA 5 HOH C 26 326 132 HOH HOH . 
CA 5 HOH C 27 327 115 HOH HOH . 
CA 5 HOH C 28 328 151 HOH HOH . 
CA 5 HOH C 29 329 47 HOH HOH . 
CA 5 HOH C 30 330 106 HOH HOH . 
CA 5 HOH C 31 331 32 HOH HOH . 
CA 5 HOH C 32 332 139 HOH HOH . 
CA 5 HOH C 33 333 145 HOH HOH . 
CA 5 HOH C 34 334 150 HOH HOH . 
CA 5 HOH C 35 335 142 HOH HOH . 
CA 5 HOH C 36 336 100 HOH HOH . 
CA 5 HOH C 37 337 144 HOH HOH . 
CA 5 HOH C 38 338 119 HOH HOH . 
CA 5 HOH C 39 339 143 HOH HOH . 
CA 5 HOH C 40 340 152 HOH HOH . 
CA 5 HOH C 41 341 146 HOH HOH . 
CA 5 HOH C 42 342 122 HOH HOH . 
CA 5 HOH C 43 343 55 HOH HOH . 
CA 5 HOH C 44 344 120 HOH HOH . 
CA 5 HOH C 45 345 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . L 4 -5.422 -11.514 9.211 1 68.07 ? C1 GOL 209 A 1 
HETATM 2 O O1 GOL . . . L 4 -5.789 -11.433 10.57 1 66.74 ? O1 GOL 209 A 1 
HETATM 3 C C2 GOL . . . L 4 -6.005 -10.326 8.457 1 65.09 ? C2 GOL 209 A 1 
HETATM 4 O O2 GOL . . . L 4 -5.116 -9.965 7.425 1 68.63 ? O2 GOL 209 A 1 
HETATM 5 C C3 GOL . . . L 4 -7.349 -10.719 7.854 1 61.78 ? C3 GOL 209 A 1 
HETATM 6 O O3 GOL . . . L 4 -7.97 -9.586 7.288 1 50.3 ? O3 GOL 209 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#