data_6CKL # _model_server_result.job_id aAHfDQrkTKQaWFLH3kCsBA _model_server_result.datetime_utc '2024-12-26 02:38:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ckl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":303}' # _entry.id 6CKL # _exptl.entry_id 6CKL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CKL _cell.length_a 128.48 _cell.length_b 151.01 _cell.length_c 84.9 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CKL _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,I,J,O,P 1 1 C,K,L,M,N,Q 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 M N N # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 156 n n CAC OA1 FLC doub 157 n n CAC OA2 FLC sing 158 n n CA CB FLC sing 159 n n CA HA1 FLC sing 160 n n CA HA2 FLC sing 161 n n CB CBC FLC sing 162 n n CB CG FLC sing 163 n n CB OHB FLC sing 164 n n CBC OB1 FLC doub 165 n n CBC OB2 FLC sing 166 n n CG CGC FLC sing 167 n n CG HG1 FLC sing 168 n n CG HG2 FLC sing 169 n n CGC OG1 FLC doub 170 n n CGC OG2 FLC sing 171 n n OHB HOB FLC sing 172 n n # _atom_sites.entry_id 6CKL _atom_sites.fract_transf_matrix[1][1] 0.007783 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006622 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011779 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 C5P A 1 701 701 C5P C5P . E 3 CL A 1 702 804 CL CL . F 4 DAN A 1 703 702 DAN DAN . G 4 DAN B 1 301 702 DAN DAN . H 5 FLC B 1 302 803 FLC FLC . I 2 C5P B 1 303 701 C5P C5P . J 3 CL B 1 304 804 CL CL . K 4 DAN C 1 301 702 DAN DAN . L 2 C5P C 1 302 701 C5P C5P . M 5 FLC C 1 303 803 FLC FLC . N 3 CL C 1 304 804 CL CL . O 6 HOH A 1 801 95 HOH HOH . O 6 HOH A 2 802 64 HOH HOH . O 6 HOH A 3 803 86 HOH HOH . O 6 HOH A 4 804 127 HOH HOH . O 6 HOH A 5 805 65 HOH HOH . O 6 HOH A 6 806 32 HOH HOH . O 6 HOH A 7 807 23 HOH HOH . O 6 HOH A 8 808 14 HOH HOH . O 6 HOH A 9 809 56 HOH HOH . O 6 HOH A 10 810 19 HOH HOH . O 6 HOH A 11 811 108 HOH HOH . O 6 HOH A 12 812 7 HOH HOH . O 6 HOH A 13 813 9 HOH HOH . O 6 HOH A 14 814 44 HOH HOH . O 6 HOH A 15 815 13 HOH HOH . O 6 HOH A 16 816 31 HOH HOH . O 6 HOH A 17 817 116 HOH HOH . O 6 HOH A 18 818 39 HOH HOH . O 6 HOH A 19 819 87 HOH HOH . O 6 HOH A 20 820 74 HOH HOH . O 6 HOH A 21 821 60 HOH HOH . O 6 HOH A 22 822 130 HOH HOH . O 6 HOH A 23 823 48 HOH HOH . O 6 HOH A 24 824 40 HOH HOH . O 6 HOH A 25 825 93 HOH HOH . O 6 HOH A 26 826 79 HOH HOH . O 6 HOH A 27 827 136 HOH HOH . O 6 HOH A 28 828 22 HOH HOH . O 6 HOH A 29 829 128 HOH HOH . O 6 HOH A 30 830 101 HOH HOH . O 6 HOH A 31 831 132 HOH HOH . O 6 HOH A 32 832 42 HOH HOH . O 6 HOH A 33 833 121 HOH HOH . O 6 HOH A 34 834 72 HOH HOH . O 6 HOH A 35 835 133 HOH HOH . O 6 HOH A 36 836 77 HOH HOH . O 6 HOH A 37 837 137 HOH HOH . P 6 HOH B 1 401 63 HOH HOH . P 6 HOH B 2 402 109 HOH HOH . P 6 HOH B 3 403 52 HOH HOH . P 6 HOH B 4 404 11 HOH HOH . P 6 HOH B 5 405 30 HOH HOH . P 6 HOH B 6 406 59 HOH HOH . P 6 HOH B 7 407 1 HOH HOH . P 6 HOH B 8 408 69 HOH HOH . P 6 HOH B 9 409 58 HOH HOH . P 6 HOH B 10 410 17 HOH HOH . P 6 HOH B 11 411 5 HOH HOH . P 6 HOH B 12 412 51 HOH HOH . P 6 HOH B 13 413 28 HOH HOH . P 6 HOH B 14 414 10 HOH HOH . P 6 HOH B 15 415 94 HOH HOH . P 6 HOH B 16 416 102 HOH HOH . P 6 HOH B 17 417 55 HOH HOH . P 6 HOH B 18 418 27 HOH HOH . P 6 HOH B 19 419 104 HOH HOH . P 6 HOH B 20 420 49 HOH HOH . P 6 HOH B 21 421 89 HOH HOH . P 6 HOH B 22 422 24 HOH HOH . P 6 HOH B 23 423 15 HOH HOH . P 6 HOH B 24 424 34 HOH HOH . P 6 HOH B 25 425 78 HOH HOH . P 6 HOH B 26 426 115 HOH HOH . P 6 HOH B 27 427 112 HOH HOH . P 6 HOH B 28 428 99 HOH HOH . P 6 HOH B 29 429 70 HOH HOH . P 6 HOH B 30 430 80 HOH HOH . P 6 HOH B 31 431 43 HOH HOH . P 6 HOH B 32 432 20 HOH HOH . P 6 HOH B 33 433 119 HOH HOH . P 6 HOH B 34 434 6 HOH HOH . P 6 HOH B 35 435 110 HOH HOH . P 6 HOH B 36 436 46 HOH HOH . P 6 HOH B 37 437 47 HOH HOH . P 6 HOH B 38 438 84 HOH HOH . P 6 HOH B 39 439 62 HOH HOH . P 6 HOH B 40 440 50 HOH HOH . Q 6 HOH C 1 401 33 HOH HOH . Q 6 HOH C 2 402 29 HOH HOH . Q 6 HOH C 3 403 66 HOH HOH . Q 6 HOH C 4 404 54 HOH HOH . Q 6 HOH C 5 405 90 HOH HOH . Q 6 HOH C 6 406 117 HOH HOH . Q 6 HOH C 7 407 118 HOH HOH . Q 6 HOH C 8 408 67 HOH HOH . Q 6 HOH C 9 409 91 HOH HOH . Q 6 HOH C 10 410 81 HOH HOH . Q 6 HOH C 11 411 8 HOH HOH . Q 6 HOH C 12 412 85 HOH HOH . Q 6 HOH C 13 413 92 HOH HOH . Q 6 HOH C 14 414 3 HOH HOH . Q 6 HOH C 15 415 103 HOH HOH . Q 6 HOH C 16 416 4 HOH HOH . Q 6 HOH C 17 417 16 HOH HOH . Q 6 HOH C 18 418 76 HOH HOH . Q 6 HOH C 19 419 2 HOH HOH . Q 6 HOH C 20 420 45 HOH HOH . Q 6 HOH C 21 421 129 HOH HOH . Q 6 HOH C 22 422 53 HOH HOH . Q 6 HOH C 23 423 97 HOH HOH . Q 6 HOH C 24 424 35 HOH HOH . Q 6 HOH C 25 425 96 HOH HOH . Q 6 HOH C 26 426 12 HOH HOH . Q 6 HOH C 27 427 21 HOH HOH . Q 6 HOH C 28 428 71 HOH HOH . Q 6 HOH C 29 429 134 HOH HOH . Q 6 HOH C 30 430 68 HOH HOH . Q 6 HOH C 31 431 131 HOH HOH . Q 6 HOH C 32 432 126 HOH HOH . Q 6 HOH C 33 433 36 HOH HOH . Q 6 HOH C 34 434 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . M 5 161.875 -0.349 -3.338 0.5 59.96 ? CAC FLC 303 C 1 HETATM 2 C CA FLC . . . M 5 162.815 -0.702 -2.209 0.5 62.13 ? CA FLC 303 C 1 HETATM 3 C CB FLC . . . M 5 162.283 -0.2 -0.869 0.5 63.24 ? CB FLC 303 C 1 HETATM 4 C CBC FLC . . . M 5 160.978 -0.91 -0.539 0.5 64.01 ? CBC FLC 303 C 1 HETATM 5 C CG FLC . . . M 5 163.359 -0.409 0.194 0.5 62.06 ? CG FLC 303 C 1 HETATM 6 C CGC FLC . . . M 5 162.744 -0.415 1.57 0.5 65.78 ? CGC FLC 303 C 1 HETATM 7 O OA1 FLC . . . M 5 161.541 -1.249 -4.164 0.5 56.26 ? OA1 FLC 303 C 1 HETATM 8 O OA2 FLC . . . M 5 161.471 0.841 -3.392 0.5 55.22 ? OA2 FLC 303 C 1 HETATM 9 O OB1 FLC . . . M 5 160.428 -1.629 -1.412 0.5 60.18 ? OB1 FLC 303 C 1 HETATM 10 O OB2 FLC . . . M 5 160.471 -0.761 0.596 0.5 66.86 ? OB2 FLC 303 C 1 HETATM 11 O OG1 FLC . . . M 5 162.41 -1.504 2.091 0.5 67.49 ? OG1 FLC 303 C 1 HETATM 12 O OG2 FLC . . . M 5 162.583 0.679 2.145 0.5 69.93 ? OG2 FLC 303 C 1 HETATM 13 O OHB FLC . . . M 5 162.031 1.206 -0.963 0.5 66.54 ? OHB FLC 303 C 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #