data_6CKO # _model_server_result.job_id W23YYgdBKims9jOcoy1Xpg _model_server_result.datetime_utc '2025-07-31 07:59:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cko # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":2002}' # _entry.id 6CKO # _exptl.entry_id 6CKO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight ? _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN ATOM OR ION' _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CKO _cell.length_a 101.701 _cell.length_b 122.558 _cell.length_c 65.404 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CKO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,K,L,M,N,O,W,X,Y,Z,AA,BA,CA,DA,KA,MA 1 1,2 B,D,P,Q,R,S,T,U,V,EA,FA,GA,HA,IA,JA,LA,NA 1 3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_567 x,-y+1,-z+2 1 0 0 0 -1 0 0 0 -1 0 122.558 130.808 3 'crystal symmetry operation' 5_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -50.8505 61.279 0 4 'crystal symmetry operation' 8_457 x-1/2,-y+1/2,-z+2 1 0 0 0 -1 0 0 0 -1 -50.8505 61.279 130.808 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 X N N ? 4 Y N N ? 4 Z N N ? 4 AA N N ? 4 BA N N ? 4 CA N N ? 4 DA N N ? 4 FA N N ? 4 GA N N ? 4 HA N N ? 4 IA N N ? 4 JA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 46 C CYS 604 1_555 D SG CYS 46 D CYS 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 A OE1 GLU 19 A GLU 737 1_555 F ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc2 A OE2 GLU 19 A GLU 737 1_555 F ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc3 A NE2 HIS 46 A HIS 764 1_555 F ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc4 A OE2 GLU 51 A GLU 769 1_555 EA ZN ZN . D ZN 2001 3_656 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc5 A OE1 GLU 56 A GLU 774 1_555 E ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc6 A OE2 GLU 56 A GLU 774 1_555 E ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc7 A OE1 GLU 57 A GLU 775 1_555 G ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc8 E ZN ZN . A ZN 801 1_555 C NE2 HIS 16 C HIS 574 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc9 E ZN ZN . A ZN 801 8_557 D OD2 ASP 5 D ASP 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? metalc ? metalc10 B OE1 GLU 15 B GLU 733 1_555 R ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc11 B OE1 GLU 19 B GLU 737 1_555 Q ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc12 B OE2 GLU 19 B GLU 737 1_555 Q ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc13 B NE2 HIS 46 B HIS 764 1_555 Q ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc14 B OE2 GLU 56 B GLU 774 1_555 P ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc15 P ZN ZN . B ZN 801 8_457 C OD2 ASP 5 C ASP 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.757 ? metalc ? metalc16 P ZN ZN . B ZN 801 1_555 D NE2 HIS 16 D HIS 574 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc17 C NE2 HIS 29 C HIS 587 1_555 W ZN ZN . C ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc18 C OD2 ASP 30 C ASP 588 1_555 W ZN ZN . C ZN 2001 4_567 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? metalc ? metalc19 C OE2 GLU 33 C GLU 591 1_555 W ZN ZN . C ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc20 D NE2 HIS 29 D HIS 587 1_555 EA ZN ZN . D ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? # _chem_comp.formula ? _chem_comp.formula_weight ? _chem_comp.id UNX _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN ATOM OR ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6CKO _atom_sites.fract_transf_matrix[1][1] 0.009833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008159 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01529 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 801 801 ZN ZN . F 3 ZN A 1 802 802 ZN ZN . G 3 ZN A 1 803 5 ZN ZN . H 4 UNX A 1 804 3 UNX UNX . I 4 UNX A 1 805 4 UNX UNX . J 4 UNX A 1 806 6 UNX UNX . K 4 UNX A 1 807 10 UNX UNX . L 4 UNX A 1 808 17 UNX UNX . M 4 UNX A 1 809 18 UNX UNX . N 4 UNX A 1 810 19 UNX UNX . O 4 UNX A 1 811 20 UNX UNX . P 3 ZN B 1 801 801 ZN ZN . Q 3 ZN B 1 802 802 ZN ZN . R 3 ZN B 1 803 4 ZN ZN . S 4 UNX B 1 804 5 UNX UNX . T 4 UNX B 1 805 8 UNX UNX . U 4 UNX B 1 806 9 UNX UNX . V 4 UNX B 1 807 22 UNX UNX . W 3 ZN C 1 2001 2001 ZN ZN . X 4 UNX C 1 2002 7 UNX UNX . Y 4 UNX C 1 2003 13 UNX UNX . Z 4 UNX C 1 2004 14 UNX UNX . AA 4 UNX C 1 2005 23 UNX UNX . BA 4 UNX C 1 2006 24 UNX UNX . CA 4 UNX C 1 2007 25 UNX UNX . DA 4 UNX C 1 2008 26 UNX UNX . EA 3 ZN D 1 2001 2001 ZN ZN . FA 4 UNX D 1 2002 11 UNX UNX . GA 4 UNX D 1 2003 12 UNX UNX . HA 4 UNX D 1 2004 15 UNX UNX . IA 4 UNX D 1 2005 16 UNX UNX . JA 4 UNX D 1 2006 21 UNX UNX . KA 5 HOH A 1 901 20 HOH HOH . KA 5 HOH A 2 902 21 HOH HOH . KA 5 HOH A 3 903 17 HOH HOH . KA 5 HOH A 4 904 9 HOH HOH . KA 5 HOH A 5 905 16 HOH HOH . KA 5 HOH A 6 906 8 HOH HOH . KA 5 HOH A 7 907 19 HOH HOH . KA 5 HOH A 8 908 28 HOH HOH . KA 5 HOH A 9 909 5 HOH HOH . LA 5 HOH B 1 901 1 HOH HOH . LA 5 HOH B 2 902 4 HOH HOH . LA 5 HOH B 3 903 22 HOH HOH . LA 5 HOH B 4 904 3 HOH HOH . LA 5 HOH B 5 905 18 HOH HOH . MA 5 HOH C 1 2101 23 HOH HOH . MA 5 HOH C 2 2102 12 HOH HOH . MA 5 HOH C 3 2103 27 HOH HOH . MA 5 HOH C 4 2104 11 HOH HOH . MA 5 HOH C 5 2105 24 HOH HOH . MA 5 HOH C 6 2106 10 HOH HOH . MA 5 HOH C 7 2107 15 HOH HOH . MA 5 HOH C 8 2108 2 HOH HOH . NA 5 HOH D 1 2101 30 HOH HOH . NA 5 HOH D 2 2102 6 HOH HOH . NA 5 HOH D 3 2103 14 HOH HOH . NA 5 HOH D 4 2104 26 HOH HOH . NA 5 HOH D 5 2105 29 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol X _atom_site.label_atom_id UNK _atom_site.label_comp_id UNX _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id X _atom_site.label_entity_id 4 _atom_site.Cartn_x 41.808 _atom_site.Cartn_y 67.902 _atom_site.Cartn_z 66.542 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id UNK _atom_site.auth_comp_id UNX _atom_site.auth_seq_id 2002 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 438 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #