data_6CKT # _model_server_result.job_id l-nGgyPks3uCj8AG2m5Uig _model_server_result.datetime_utc '2024-11-05 04:55:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ckt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6CKT # _exptl.entry_id 6CKT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CKT _cell.length_a 101.73 _cell.length_b 101.73 _cell.length_c 70.98 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CKT _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6CKT _atom_sites.fract_transf_matrix[1][1] 0.00983 _atom_sites.fract_transf_matrix[1][2] 0.005675 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011351 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014088 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 1 EDO EDO . C 2 EDO A 1 302 3 EDO EDO . D 2 EDO A 1 303 4 EDO EDO . E 3 HOH A 1 401 171 HOH HOH . E 3 HOH A 2 402 74 HOH HOH . E 3 HOH A 3 403 149 HOH HOH . E 3 HOH A 4 404 115 HOH HOH . E 3 HOH A 5 405 72 HOH HOH . E 3 HOH A 6 406 39 HOH HOH . E 3 HOH A 7 407 137 HOH HOH . E 3 HOH A 8 408 88 HOH HOH . E 3 HOH A 9 409 32 HOH HOH . E 3 HOH A 10 410 111 HOH HOH . E 3 HOH A 11 411 132 HOH HOH . E 3 HOH A 12 412 164 HOH HOH . E 3 HOH A 13 413 75 HOH HOH . E 3 HOH A 14 414 43 HOH HOH . E 3 HOH A 15 415 46 HOH HOH . E 3 HOH A 16 416 83 HOH HOH . E 3 HOH A 17 417 161 HOH HOH . E 3 HOH A 18 418 105 HOH HOH . E 3 HOH A 19 419 48 HOH HOH . E 3 HOH A 20 420 30 HOH HOH . E 3 HOH A 21 421 16 HOH HOH . E 3 HOH A 22 422 150 HOH HOH . E 3 HOH A 23 423 6 HOH HOH . E 3 HOH A 24 424 66 HOH HOH . E 3 HOH A 25 425 90 HOH HOH . E 3 HOH A 26 426 110 HOH HOH . E 3 HOH A 27 427 114 HOH HOH . E 3 HOH A 28 428 128 HOH HOH . E 3 HOH A 29 429 12 HOH HOH . E 3 HOH A 30 430 20 HOH HOH . E 3 HOH A 31 431 5 HOH HOH . E 3 HOH A 32 432 68 HOH HOH . E 3 HOH A 33 433 26 HOH HOH . E 3 HOH A 34 434 27 HOH HOH . E 3 HOH A 35 435 44 HOH HOH . E 3 HOH A 36 436 176 HOH HOH . E 3 HOH A 37 437 55 HOH HOH . E 3 HOH A 38 438 64 HOH HOH . E 3 HOH A 39 439 65 HOH HOH . E 3 HOH A 40 440 22 HOH HOH . E 3 HOH A 41 441 47 HOH HOH . E 3 HOH A 42 442 56 HOH HOH . E 3 HOH A 43 443 41 HOH HOH . E 3 HOH A 44 444 140 HOH HOH . E 3 HOH A 45 445 60 HOH HOH . E 3 HOH A 46 446 98 HOH HOH . E 3 HOH A 47 447 108 HOH HOH . E 3 HOH A 48 448 59 HOH HOH . E 3 HOH A 49 449 10 HOH HOH . E 3 HOH A 50 450 28 HOH HOH . E 3 HOH A 51 451 159 HOH HOH . E 3 HOH A 52 452 18 HOH HOH . E 3 HOH A 53 453 49 HOH HOH . E 3 HOH A 54 454 70 HOH HOH . E 3 HOH A 55 455 102 HOH HOH . E 3 HOH A 56 456 109 HOH HOH . E 3 HOH A 57 457 21 HOH HOH . E 3 HOH A 58 458 4 HOH HOH . E 3 HOH A 59 459 17 HOH HOH . E 3 HOH A 60 460 24 HOH HOH . E 3 HOH A 61 461 35 HOH HOH . E 3 HOH A 62 462 13 HOH HOH . E 3 HOH A 63 463 42 HOH HOH . E 3 HOH A 64 464 76 HOH HOH . E 3 HOH A 65 465 45 HOH HOH . E 3 HOH A 66 466 58 HOH HOH . E 3 HOH A 67 467 15 HOH HOH . E 3 HOH A 68 468 19 HOH HOH . E 3 HOH A 69 469 143 HOH HOH . E 3 HOH A 70 470 14 HOH HOH . E 3 HOH A 71 471 1 HOH HOH . E 3 HOH A 72 472 36 HOH HOH . E 3 HOH A 73 473 69 HOH HOH . E 3 HOH A 74 474 141 HOH HOH . E 3 HOH A 75 475 146 HOH HOH . E 3 HOH A 76 476 54 HOH HOH . E 3 HOH A 77 477 101 HOH HOH . E 3 HOH A 78 478 11 HOH HOH . E 3 HOH A 79 479 8 HOH HOH . E 3 HOH A 80 480 153 HOH HOH . E 3 HOH A 81 481 107 HOH HOH . E 3 HOH A 82 482 180 HOH HOH . E 3 HOH A 83 483 25 HOH HOH . E 3 HOH A 84 484 119 HOH HOH . E 3 HOH A 85 485 71 HOH HOH . E 3 HOH A 86 486 86 HOH HOH . E 3 HOH A 87 487 80 HOH HOH . E 3 HOH A 88 488 81 HOH HOH . E 3 HOH A 89 489 37 HOH HOH . E 3 HOH A 90 490 99 HOH HOH . E 3 HOH A 91 491 23 HOH HOH . E 3 HOH A 92 492 125 HOH HOH . E 3 HOH A 93 493 85 HOH HOH . E 3 HOH A 94 494 63 HOH HOH . E 3 HOH A 95 495 103 HOH HOH . E 3 HOH A 96 496 104 HOH HOH . E 3 HOH A 97 497 38 HOH HOH . E 3 HOH A 98 498 57 HOH HOH . E 3 HOH A 99 499 169 HOH HOH . E 3 HOH A 100 500 181 HOH HOH . E 3 HOH A 101 501 118 HOH HOH . E 3 HOH A 102 502 155 HOH HOH . E 3 HOH A 103 503 178 HOH HOH . E 3 HOH A 104 504 84 HOH HOH . E 3 HOH A 105 505 133 HOH HOH . E 3 HOH A 106 506 124 HOH HOH . E 3 HOH A 107 507 77 HOH HOH . E 3 HOH A 108 508 96 HOH HOH . E 3 HOH A 109 509 177 HOH HOH . E 3 HOH A 110 510 122 HOH HOH . E 3 HOH A 111 511 50 HOH HOH . E 3 HOH A 112 512 117 HOH HOH . E 3 HOH A 113 513 157 HOH HOH . E 3 HOH A 114 514 121 HOH HOH . E 3 HOH A 115 515 95 HOH HOH . E 3 HOH A 116 516 29 HOH HOH . E 3 HOH A 117 517 67 HOH HOH . E 3 HOH A 118 518 51 HOH HOH . E 3 HOH A 119 519 87 HOH HOH . E 3 HOH A 120 520 91 HOH HOH . E 3 HOH A 121 521 40 HOH HOH . E 3 HOH A 122 522 139 HOH HOH . E 3 HOH A 123 523 52 HOH HOH . E 3 HOH A 124 524 61 HOH HOH . E 3 HOH A 125 525 179 HOH HOH . E 3 HOH A 126 526 127 HOH HOH . E 3 HOH A 127 527 34 HOH HOH . E 3 HOH A 128 528 100 HOH HOH . E 3 HOH A 129 529 33 HOH HOH . E 3 HOH A 130 530 126 HOH HOH . E 3 HOH A 131 531 152 HOH HOH . E 3 HOH A 132 532 172 HOH HOH . E 3 HOH A 133 533 163 HOH HOH . E 3 HOH A 134 534 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -17.082 -3.214 -17.666 1 67.16 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . C 2 -16.825 -4.275 -18.588 1 76.08 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . C 2 -16.12 -3.354 -16.497 1 57.72 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . C 2 -14.991 -2.498 -16.68 1 33.95 ? O2 EDO 302 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #