data_6CKX # _model_server_result.job_id C1uNDCXDYQarJqbXYFKydg _model_server_result.datetime_utc '2024-11-20 15:20:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ckx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1101}' # _entry.id 6CKX # _exptl.entry_id 6CKX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CKX _cell.length_a 96.596 _cell.length_b 107.53 _cell.length_c 138.324 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CKX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,J,K 1 1 C,D,H,I,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TYR 180 A TYR 892 1_555 A N TPO 181 A TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C TPO 181 A TPO 893 1_555 A N ASN 182 A ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 C C TYR 180 C TYR 892 1_555 C N TPO 181 C TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 C C TPO 181 C TPO 893 1_555 C N ASN 182 C ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? metalc ? metalc1 A OD1 ASN 152 A ASN 864 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc2 A OD2 ASP 165 A ASP 877 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc3 E MG MG . A MG 1101 1_555 J O HOH . A HOH 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc4 B OE2 GLU 159 B GLU 158 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc5 C OD1 ASN 152 C ASN 864 1_555 H MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc6 C OD2 ASP 165 C ASP 877 1_555 H MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6CKX _atom_sites.fract_transf_matrix[1][1] 0.010352 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0093 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG A 1 1101 1101 MG MG . F 4 8M1 A 1 1102 1102 8M1 8M1 . G 3 MG B 1 301 301 MG MG . H 3 MG C 1 1101 1101 MG MG . I 4 8M1 C 1 1102 1102 8M1 8M1 . J 5 HOH A 1 1201 1201 HOH HOH . J 5 HOH A 2 1202 1202 HOH HOH . J 5 HOH A 3 1203 1203 HOH HOH . J 5 HOH A 4 1204 1204 HOH HOH . J 5 HOH A 5 1205 1205 HOH HOH . J 5 HOH A 6 1206 1206 HOH HOH . J 5 HOH A 7 1207 1207 HOH HOH . J 5 HOH A 8 1208 1208 HOH HOH . K 5 HOH B 1 401 401 HOH HOH . K 5 HOH B 2 402 402 HOH HOH . K 5 HOH B 3 403 403 HOH HOH . K 5 HOH B 4 404 404 HOH HOH . K 5 HOH B 5 405 405 HOH HOH . K 5 HOH B 6 406 406 HOH HOH . K 5 HOH B 7 407 407 HOH HOH . L 5 HOH C 1 1201 1201 HOH HOH . L 5 HOH C 2 1202 1202 HOH HOH . L 5 HOH C 3 1203 1203 HOH HOH . L 5 HOH C 4 1204 1204 HOH HOH . L 5 HOH C 5 1205 1205 HOH HOH . L 5 HOH C 6 1206 1206 HOH HOH . L 5 HOH C 7 1207 1207 HOH HOH . L 5 HOH C 8 1208 1208 HOH HOH . L 5 HOH C 9 1209 1209 HOH HOH . L 5 HOH C 10 1210 1210 HOH HOH . M 5 HOH D 1 301 301 HOH HOH . M 5 HOH D 2 302 302 HOH HOH . M 5 HOH D 3 303 303 HOH HOH . M 5 HOH D 4 304 304 HOH HOH . M 5 HOH D 5 305 305 HOH HOH . M 5 HOH D 6 306 306 HOH HOH . M 5 HOH D 7 307 307 HOH HOH . M 5 HOH D 8 308 308 HOH HOH . M 5 HOH D 9 309 309 HOH HOH . M 5 HOH D 10 310 310 HOH HOH . M 5 HOH D 11 311 311 HOH HOH . M 5 HOH D 12 312 312 HOH HOH . M 5 HOH D 13 313 313 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x -18.04 _atom_site.Cartn_y -20.771 _atom_site.Cartn_z 30.702 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 76.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1101 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #