data_6CML
#
_model_server_result.job_id            ahkvi_eKuPaz4yltTZdZ5Q 
_model_server_result.datetime_utc      '2024-10-16 23:23:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6cml 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":800}' 
#
_entry.id    6CML 
#
_exptl.entry_id    6CML 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              149.211 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            METHIONINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6CML 
_cell.length_a            87.64 
_cell.length_b            106.23 
_cell.length_c            208.28 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6CML 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,F 1 1 
B,D,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C5 H11 N O2 S' 
_chem_comp.formula_weight    149.211 
_chem_comp.id                MET 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              METHIONINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA MET sing 282 n n 
N H MET sing 283 n n 
N H2 MET sing 284 n n 
CA C MET sing 285 n n 
CA CB MET sing 286 n n 
CA HA MET sing 287 n n 
C O MET doub 288 n n 
C OXT MET sing 289 n n 
CB CG MET sing 290 n n 
CB HB2 MET sing 291 n n 
CB HB3 MET sing 292 n n 
CG SD MET sing 293 n n 
CG HG2 MET sing 294 n n 
CG HG3 MET sing 295 n n 
SD CE MET sing 296 n n 
CE HE1 MET sing 297 n n 
CE HE2 MET sing 298 n n 
CE HE3 MET sing 299 n n 
OXT HXT MET sing 300 n n 
#
_atom_sites.entry_id                     6CML 
_atom_sites.fract_transf_matrix[1][1]    0.01141 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009414 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004801 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MET A 1 800 800 MET MET . 
D 3 96S B 1 801 801 96S 96S . 
E 4 GOL B 1 802 802 GOL GOL . 
F 5 HOH A 1 901 901 HOH HOH . 
F 5 HOH A 2 902 902 HOH HOH . 
F 5 HOH A 3 903 903 HOH HOH . 
F 5 HOH A 4 904 904 HOH HOH . 
F 5 HOH A 5 905 905 HOH HOH . 
F 5 HOH A 6 906 906 HOH HOH . 
F 5 HOH A 7 907 907 HOH HOH . 
F 5 HOH A 8 908 908 HOH HOH . 
F 5 HOH A 9 909 909 HOH HOH . 
F 5 HOH A 10 910 910 HOH HOH . 
F 5 HOH A 11 911 911 HOH HOH . 
F 5 HOH A 12 912 912 HOH HOH . 
F 5 HOH A 13 913 913 HOH HOH . 
F 5 HOH A 14 914 914 HOH HOH . 
F 5 HOH A 15 915 915 HOH HOH . 
F 5 HOH A 16 916 916 HOH HOH . 
F 5 HOH A 17 917 917 HOH HOH . 
F 5 HOH A 18 918 918 HOH HOH . 
F 5 HOH A 19 919 919 HOH HOH . 
F 5 HOH A 20 920 920 HOH HOH . 
F 5 HOH A 21 921 921 HOH HOH . 
F 5 HOH A 22 922 922 HOH HOH . 
F 5 HOH A 23 923 923 HOH HOH . 
F 5 HOH A 24 924 924 HOH HOH . 
F 5 HOH A 25 925 925 HOH HOH . 
F 5 HOH A 26 926 926 HOH HOH . 
F 5 HOH A 27 927 927 HOH HOH . 
F 5 HOH A 28 928 928 HOH HOH . 
F 5 HOH A 29 929 929 HOH HOH . 
F 5 HOH A 30 930 930 HOH HOH . 
F 5 HOH A 31 931 931 HOH HOH . 
F 5 HOH A 32 932 932 HOH HOH . 
F 5 HOH A 33 933 933 HOH HOH . 
F 5 HOH A 34 934 934 HOH HOH . 
F 5 HOH A 35 935 935 HOH HOH . 
F 5 HOH A 36 936 936 HOH HOH . 
F 5 HOH A 37 937 937 HOH HOH . 
F 5 HOH A 38 938 938 HOH HOH . 
F 5 HOH A 39 939 939 HOH HOH . 
F 5 HOH A 40 940 940 HOH HOH . 
F 5 HOH A 41 941 941 HOH HOH . 
F 5 HOH A 42 942 942 HOH HOH . 
F 5 HOH A 43 943 943 HOH HOH . 
F 5 HOH A 44 944 944 HOH HOH . 
F 5 HOH A 45 945 945 HOH HOH . 
F 5 HOH A 46 946 946 HOH HOH . 
F 5 HOH A 47 947 947 HOH HOH . 
F 5 HOH A 48 948 948 HOH HOH . 
F 5 HOH A 49 949 949 HOH HOH . 
F 5 HOH A 50 950 950 HOH HOH . 
F 5 HOH A 51 951 951 HOH HOH . 
F 5 HOH A 52 952 952 HOH HOH . 
F 5 HOH A 53 953 953 HOH HOH . 
F 5 HOH A 54 954 954 HOH HOH . 
F 5 HOH A 55 955 955 HOH HOH . 
F 5 HOH A 56 956 956 HOH HOH . 
F 5 HOH A 57 957 957 HOH HOH . 
F 5 HOH A 58 958 958 HOH HOH . 
F 5 HOH A 59 959 959 HOH HOH . 
F 5 HOH A 60 960 960 HOH HOH . 
F 5 HOH A 61 961 961 HOH HOH . 
F 5 HOH A 62 962 962 HOH HOH . 
F 5 HOH A 63 963 963 HOH HOH . 
F 5 HOH A 64 964 964 HOH HOH . 
F 5 HOH A 65 965 965 HOH HOH . 
F 5 HOH A 66 966 966 HOH HOH . 
F 5 HOH A 67 967 967 HOH HOH . 
F 5 HOH A 68 968 968 HOH HOH . 
F 5 HOH A 69 969 969 HOH HOH . 
F 5 HOH A 70 970 970 HOH HOH . 
F 5 HOH A 71 971 971 HOH HOH . 
F 5 HOH A 72 972 972 HOH HOH . 
F 5 HOH A 73 973 973 HOH HOH . 
F 5 HOH A 74 974 974 HOH HOH . 
F 5 HOH A 75 975 975 HOH HOH . 
F 5 HOH A 76 976 976 HOH HOH . 
G 5 HOH B 1 901 901 HOH HOH . 
G 5 HOH B 2 902 902 HOH HOH . 
G 5 HOH B 3 903 903 HOH HOH . 
G 5 HOH B 4 904 904 HOH HOH . 
G 5 HOH B 5 905 905 HOH HOH . 
G 5 HOH B 6 906 906 HOH HOH . 
G 5 HOH B 7 907 907 HOH HOH . 
G 5 HOH B 8 908 908 HOH HOH . 
G 5 HOH B 9 909 909 HOH HOH . 
G 5 HOH B 10 910 910 HOH HOH . 
G 5 HOH B 11 911 911 HOH HOH . 
G 5 HOH B 12 912 912 HOH HOH . 
G 5 HOH B 13 913 913 HOH HOH . 
G 5 HOH B 14 914 914 HOH HOH . 
G 5 HOH B 15 915 915 HOH HOH . 
G 5 HOH B 16 916 916 HOH HOH . 
G 5 HOH B 17 917 917 HOH HOH . 
G 5 HOH B 18 918 918 HOH HOH . 
G 5 HOH B 19 919 919 HOH HOH . 
G 5 HOH B 20 920 920 HOH HOH . 
G 5 HOH B 21 921 921 HOH HOH . 
G 5 HOH B 22 922 922 HOH HOH . 
G 5 HOH B 23 923 923 HOH HOH . 
G 5 HOH B 24 924 924 HOH HOH . 
G 5 HOH B 25 925 925 HOH HOH . 
G 5 HOH B 26 926 926 HOH HOH . 
G 5 HOH B 27 927 927 HOH HOH . 
G 5 HOH B 28 928 928 HOH HOH . 
G 5 HOH B 29 929 929 HOH HOH . 
G 5 HOH B 30 930 930 HOH HOH . 
G 5 HOH B 31 931 931 HOH HOH . 
G 5 HOH B 32 932 932 HOH HOH . 
G 5 HOH B 33 933 933 HOH HOH . 
G 5 HOH B 34 934 934 HOH HOH . 
G 5 HOH B 35 935 935 HOH HOH . 
G 5 HOH B 36 936 936 HOH HOH . 
G 5 HOH B 37 937 937 HOH HOH . 
G 5 HOH B 38 938 938 HOH HOH . 
G 5 HOH B 39 939 939 HOH HOH . 
G 5 HOH B 40 940 940 HOH HOH . 
G 5 HOH B 41 941 941 HOH HOH . 
G 5 HOH B 42 942 942 HOH HOH . 
G 5 HOH B 43 943 943 HOH HOH . 
G 5 HOH B 44 944 944 HOH HOH . 
G 5 HOH B 45 945 945 HOH HOH . 
G 5 HOH B 46 946 946 HOH HOH . 
G 5 HOH B 47 947 947 HOH HOH . 
G 5 HOH B 48 948 948 HOH HOH . 
G 5 HOH B 49 949 949 HOH HOH . 
G 5 HOH B 50 950 950 HOH HOH . 
G 5 HOH B 51 951 951 HOH HOH . 
G 5 HOH B 52 952 952 HOH HOH . 
G 5 HOH B 53 953 953 HOH HOH . 
G 5 HOH B 54 954 954 HOH HOH . 
G 5 HOH B 55 955 955 HOH HOH . 
G 5 HOH B 56 956 956 HOH HOH . 
G 5 HOH B 57 957 957 HOH HOH . 
G 5 HOH B 58 958 958 HOH HOH . 
G 5 HOH B 59 959 959 HOH HOH . 
G 5 HOH B 60 960 960 HOH HOH . 
G 5 HOH B 61 961 961 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N MET . . . C 2 -7.491 -15.393 -55.488 1 45.05 ? N MET 800 A 1 
HETATM 2 C CA MET . . . C 2 -7.48 -15.694 -54.031 1 44.16 ? CA MET 800 A 1 
HETATM 3 C C MET . . . C 2 -8.868 -16.126 -53.564 1 44.9 ? C MET 800 A 1 
HETATM 4 O O MET . . . C 2 -9.898 -16.019 -54.261 1 40.27 ? O MET 800 A 1 
HETATM 5 C CB MET . . . C 2 -7.047 -14.462 -53.22 1 44.18 ? CB MET 800 A 1 
HETATM 6 C CG MET . . . C 2 -5.811 -13.744 -53.742 1 43.96 ? CG MET 800 A 1 
HETATM 7 S SD MET . . . C 2 -5.361 -12.313 -52.752 1 42.84 ? SD MET 800 A 1 
HETATM 8 C CE MET . . . C 2 -3.622 -12.15 -53.196 1 43.39 ? CE MET 800 A 1 
HETATM 9 O OXT MET . . . C 2 -8.966 -16.572 -52.418 1 48.73 ? OXT MET 800 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           9 
#