data_6COI # _model_server_result.job_id M_A1tVY3-Q9-Hgv2fX9wOA _model_server_result.datetime_utc '2024-11-28 09:20:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6coi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6COI # _exptl.entry_id 6COI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6COI _cell.length_a 49.917 _cell.length_b 86.943 _cell.length_c 122.982 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6COI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 H C1 MXN . B MXN 302 1_555 I C5 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.635 ? covale ? covale2 H C3 MXN . B MXN 302 1_555 I C4 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.13 ? covale ? covale3 H C4 MXN . B MXN 302 1_555 I C3 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.639 ? covale ? covale4 H C5 MXN . B MXN 302 1_555 I C4 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.549 ? covale ? covale5 H C5 MXN . B MXN 302 1_555 I C2 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.584 ? covale ? covale6 H C6 MXN . B MXN 302 1_555 I C1 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.14 ? covale ? covale7 H C6 MXN . B MXN 302 1_555 I C3 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? covale ? covale8 H C7 MXN . B MXN 302 1_555 I C1 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 ? covale ? covale9 H C7 MXN . B MXN 302 1_555 I C6 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.586 ? covale ? covale10 H C7 MXN . B MXN 302 1_555 I C7 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale11 H C8 MXN . B MXN 302 1_555 I C7 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.474 ? covale ? covale12 H C8 MXN . B MXN 302 1_555 I N9 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? covale ? covale13 H O10 MXN . B MXN 302 1_555 I C7 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 130 n n C1 C2 GOL sing 131 n n C1 H11 GOL sing 132 n n C1 H12 GOL sing 133 n n O1 HO1 GOL sing 134 n n C2 O2 GOL sing 135 n n C2 C3 GOL sing 136 n n C2 H2 GOL sing 137 n n O2 HO2 GOL sing 138 n n C3 O3 GOL sing 139 n n C3 H31 GOL sing 140 n n C3 H32 GOL sing 141 n n O3 HO3 GOL sing 142 n n # _atom_sites.entry_id 6COI _atom_sites.fract_transf_matrix[1][1] 0.020033 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011502 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008131 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 301 1 GOL GOL . D 3 CYN A 1 302 1 CYN CYN . E 4 HBX A 1 303 1 HBX HBX . F 4 HBX A 1 304 3 HBX HBX . G 4 HBX B 1 301 2 HBX HBX . H 5 MXN B 1 302 1 MXN MXN . I 6 MNN B 1 303 1 MNN MNN . J 7 HOH A 1 401 167 HOH HOH . J 7 HOH A 2 402 91 HOH HOH . J 7 HOH A 3 403 103 HOH HOH . J 7 HOH A 4 404 64 HOH HOH . J 7 HOH A 5 405 164 HOH HOH . J 7 HOH A 6 406 152 HOH HOH . J 7 HOH A 7 407 84 HOH HOH . J 7 HOH A 8 408 52 HOH HOH . J 7 HOH A 9 409 162 HOH HOH . J 7 HOH A 10 410 14 HOH HOH . J 7 HOH A 11 411 17 HOH HOH . J 7 HOH A 12 412 118 HOH HOH . J 7 HOH A 13 413 147 HOH HOH . J 7 HOH A 14 414 46 HOH HOH . J 7 HOH A 15 415 13 HOH HOH . J 7 HOH A 16 416 6 HOH HOH . J 7 HOH A 17 417 121 HOH HOH . J 7 HOH A 18 418 12 HOH HOH . J 7 HOH A 19 419 143 HOH HOH . J 7 HOH A 20 420 125 HOH HOH . J 7 HOH A 21 421 102 HOH HOH . J 7 HOH A 22 422 142 HOH HOH . J 7 HOH A 23 423 120 HOH HOH . J 7 HOH A 24 424 111 HOH HOH . J 7 HOH A 25 425 25 HOH HOH . J 7 HOH A 26 426 5 HOH HOH . J 7 HOH A 27 427 101 HOH HOH . J 7 HOH A 28 428 108 HOH HOH . J 7 HOH A 29 429 49 HOH HOH . J 7 HOH A 30 430 130 HOH HOH . J 7 HOH A 31 431 122 HOH HOH . J 7 HOH A 32 432 100 HOH HOH . J 7 HOH A 33 433 96 HOH HOH . J 7 HOH A 34 434 18 HOH HOH . J 7 HOH A 35 435 22 HOH HOH . J 7 HOH A 36 436 48 HOH HOH . J 7 HOH A 37 437 29 HOH HOH . J 7 HOH A 38 438 107 HOH HOH . J 7 HOH A 39 439 44 HOH HOH . J 7 HOH A 40 440 109 HOH HOH . J 7 HOH A 41 441 87 HOH HOH . J 7 HOH A 42 442 33 HOH HOH . J 7 HOH A 43 443 136 HOH HOH . J 7 HOH A 44 444 95 HOH HOH . J 7 HOH A 45 445 62 HOH HOH . J 7 HOH A 46 446 78 HOH HOH . J 7 HOH A 47 447 158 HOH HOH . J 7 HOH A 48 448 71 HOH HOH . J 7 HOH A 49 449 23 HOH HOH . J 7 HOH A 50 450 60 HOH HOH . J 7 HOH A 51 451 32 HOH HOH . J 7 HOH A 52 452 9 HOH HOH . J 7 HOH A 53 453 24 HOH HOH . J 7 HOH A 54 454 53 HOH HOH . J 7 HOH A 55 455 131 HOH HOH . J 7 HOH A 56 456 149 HOH HOH . J 7 HOH A 57 457 42 HOH HOH . J 7 HOH A 58 458 74 HOH HOH . J 7 HOH A 59 459 54 HOH HOH . J 7 HOH A 60 460 65 HOH HOH . J 7 HOH A 61 461 21 HOH HOH . J 7 HOH A 62 462 89 HOH HOH . J 7 HOH A 63 463 116 HOH HOH . J 7 HOH A 64 464 135 HOH HOH . J 7 HOH A 65 465 132 HOH HOH . J 7 HOH A 66 466 165 HOH HOH . K 7 HOH B 1 401 106 HOH HOH . K 7 HOH B 2 402 128 HOH HOH . K 7 HOH B 3 403 145 HOH HOH . K 7 HOH B 4 404 8 HOH HOH . K 7 HOH B 5 405 133 HOH HOH . K 7 HOH B 6 406 124 HOH HOH . K 7 HOH B 7 407 115 HOH HOH . K 7 HOH B 8 408 41 HOH HOH . K 7 HOH B 9 409 68 HOH HOH . K 7 HOH B 10 410 88 HOH HOH . K 7 HOH B 11 411 45 HOH HOH . K 7 HOH B 12 412 86 HOH HOH . K 7 HOH B 13 413 99 HOH HOH . K 7 HOH B 14 414 61 HOH HOH . K 7 HOH B 15 415 28 HOH HOH . K 7 HOH B 16 416 55 HOH HOH . K 7 HOH B 17 417 59 HOH HOH . K 7 HOH B 18 418 20 HOH HOH . K 7 HOH B 19 419 40 HOH HOH . K 7 HOH B 20 420 79 HOH HOH . K 7 HOH B 21 421 112 HOH HOH . K 7 HOH B 22 422 114 HOH HOH . K 7 HOH B 23 423 94 HOH HOH . K 7 HOH B 24 424 150 HOH HOH . K 7 HOH B 25 425 16 HOH HOH . K 7 HOH B 26 426 26 HOH HOH . K 7 HOH B 27 427 7 HOH HOH . K 7 HOH B 28 428 70 HOH HOH . K 7 HOH B 29 429 137 HOH HOH . K 7 HOH B 30 430 97 HOH HOH . K 7 HOH B 31 431 31 HOH HOH . K 7 HOH B 32 432 113 HOH HOH . K 7 HOH B 33 433 27 HOH HOH . K 7 HOH B 34 434 51 HOH HOH . K 7 HOH B 35 435 43 HOH HOH . K 7 HOH B 36 436 154 HOH HOH . K 7 HOH B 37 437 10 HOH HOH . K 7 HOH B 38 438 37 HOH HOH . K 7 HOH B 39 439 85 HOH HOH . K 7 HOH B 40 440 35 HOH HOH . K 7 HOH B 41 441 159 HOH HOH . K 7 HOH B 42 442 66 HOH HOH . K 7 HOH B 43 443 11 HOH HOH . K 7 HOH B 44 444 92 HOH HOH . K 7 HOH B 45 445 123 HOH HOH . K 7 HOH B 46 446 57 HOH HOH . K 7 HOH B 47 447 39 HOH HOH . K 7 HOH B 48 448 34 HOH HOH . K 7 HOH B 49 449 73 HOH HOH . K 7 HOH B 50 450 80 HOH HOH . K 7 HOH B 51 451 98 HOH HOH . K 7 HOH B 52 452 36 HOH HOH . K 7 HOH B 53 453 67 HOH HOH . K 7 HOH B 54 454 50 HOH HOH . K 7 HOH B 55 455 117 HOH HOH . K 7 HOH B 56 456 138 HOH HOH . K 7 HOH B 57 457 72 HOH HOH . K 7 HOH B 58 458 30 HOH HOH . K 7 HOH B 59 459 63 HOH HOH . K 7 HOH B 60 460 140 HOH HOH . K 7 HOH B 61 461 3 HOH HOH . K 7 HOH B 62 462 119 HOH HOH . K 7 HOH B 63 463 77 HOH HOH . K 7 HOH B 64 464 166 HOH HOH . K 7 HOH B 65 465 4 HOH HOH . K 7 HOH B 66 466 110 HOH HOH . K 7 HOH B 67 467 163 HOH HOH . K 7 HOH B 68 468 56 HOH HOH . K 7 HOH B 69 469 155 HOH HOH . K 7 HOH B 70 470 139 HOH HOH . K 7 HOH B 71 471 15 HOH HOH . K 7 HOH B 72 472 47 HOH HOH . K 7 HOH B 73 473 82 HOH HOH . K 7 HOH B 74 474 146 HOH HOH . K 7 HOH B 75 475 127 HOH HOH . K 7 HOH B 76 476 104 HOH HOH . K 7 HOH B 77 477 75 HOH HOH . K 7 HOH B 78 478 129 HOH HOH . K 7 HOH B 79 479 161 HOH HOH . K 7 HOH B 80 480 160 HOH HOH . K 7 HOH B 81 481 38 HOH HOH . K 7 HOH B 82 482 93 HOH HOH . K 7 HOH B 83 483 81 HOH HOH . K 7 HOH B 84 484 76 HOH HOH . K 7 HOH B 85 485 69 HOH HOH . K 7 HOH B 86 486 157 HOH HOH . K 7 HOH B 87 487 83 HOH HOH . K 7 HOH B 88 488 156 HOH HOH . K 7 HOH B 89 489 144 HOH HOH . K 7 HOH B 90 490 134 HOH HOH . K 7 HOH B 91 491 105 HOH HOH . K 7 HOH B 92 492 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 5.003 108.791 119.693 1 55.46 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . C 2 6.047 108.663 118.693 1 50.72 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . C 2 3.61 108.914 119.038 1 55.88 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . C 2 3.723 108.731 117.616 1 55.04 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . C 2 2.481 107.977 119.531 1 50.31 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . C 2 2.866 106.786 120.239 1 48.2 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 371 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #