data_6COI
#
_model_server_result.job_id            G_KCfq3WJnSWVwM7nyzrWg 
_model_server_result.datetime_utc      '2024-11-24 15:31:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6coi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    6COI 
#
_exptl.entry_id    6COI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.122 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            benzaldehyde 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6COI 
_cell.length_a            49.917 
_cell.length_b            86.943 
_cell.length_c            122.982 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6COI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 H C1 MXN . B MXN 302 1_555 I C5 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.635 ? 
covale ? covale2 H C3 MXN . B MXN 302 1_555 I C4 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.13 ? 
covale ? covale3 H C4 MXN . B MXN 302 1_555 I C3 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.639 ? 
covale ? covale4 H C5 MXN . B MXN 302 1_555 I C4 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.549 ? 
covale ? covale5 H C5 MXN . B MXN 302 1_555 I C2 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.584 ? 
covale ? covale6 H C6 MXN . B MXN 302 1_555 I C1 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.14 ? 
covale ? covale7 H C6 MXN . B MXN 302 1_555 I C3 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? 
covale ? covale8 H C7 MXN . B MXN 302 1_555 I C1 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 ? 
covale ? covale9 H C7 MXN . B MXN 302 1_555 I C6 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.586 ? 
covale ? covale10 H C7 MXN . B MXN 302 1_555 I C7 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? 
covale ? covale11 H C8 MXN . B MXN 302 1_555 I C7 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.474 ? 
covale ? covale12 H C8 MXN . B MXN 302 1_555 I N9 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? 
covale ? covale13 H O10 MXN . B MXN 302 1_555 I C7 MNN . B MNN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
#
_chem_comp.formula           'C7 H6 O' 
_chem_comp.formula_weight    106.122 
_chem_comp.id                HBX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              benzaldehyde 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C1' HBX sing 143 n n 
C1' O1' HBX doub 144 n n 
C1' H1' HBX sing 145 n n 
C6 C1 HBX doub 146 n y 
C2 C1 HBX sing 147 n y 
C3 C2 HBX doub 148 n y 
C2 H2 HBX sing 149 n n 
C4 C3 HBX sing 150 n y 
C3 H3 HBX sing 151 n n 
C4 C5 HBX doub 152 n y 
C4 H4 HBX sing 153 n n 
C5 C6 HBX sing 154 n y 
C5 H5 HBX sing 155 n n 
C6 H6 HBX sing 156 n n 
#
_atom_sites.entry_id                     6COI 
_atom_sites.fract_transf_matrix[1][1]    0.020033 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011502 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008131 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 301 1 GOL GOL . 
D 3 CYN A 1 302 1 CYN CYN . 
E 4 HBX A 1 303 1 HBX HBX . 
F 4 HBX A 1 304 3 HBX HBX . 
G 4 HBX B 1 301 2 HBX HBX . 
H 5 MXN B 1 302 1 MXN MXN . 
I 6 MNN B 1 303 1 MNN MNN . 
J 7 HOH A 1 401 167 HOH HOH . 
J 7 HOH A 2 402 91 HOH HOH . 
J 7 HOH A 3 403 103 HOH HOH . 
J 7 HOH A 4 404 64 HOH HOH . 
J 7 HOH A 5 405 164 HOH HOH . 
J 7 HOH A 6 406 152 HOH HOH . 
J 7 HOH A 7 407 84 HOH HOH . 
J 7 HOH A 8 408 52 HOH HOH . 
J 7 HOH A 9 409 162 HOH HOH . 
J 7 HOH A 10 410 14 HOH HOH . 
J 7 HOH A 11 411 17 HOH HOH . 
J 7 HOH A 12 412 118 HOH HOH . 
J 7 HOH A 13 413 147 HOH HOH . 
J 7 HOH A 14 414 46 HOH HOH . 
J 7 HOH A 15 415 13 HOH HOH . 
J 7 HOH A 16 416 6 HOH HOH . 
J 7 HOH A 17 417 121 HOH HOH . 
J 7 HOH A 18 418 12 HOH HOH . 
J 7 HOH A 19 419 143 HOH HOH . 
J 7 HOH A 20 420 125 HOH HOH . 
J 7 HOH A 21 421 102 HOH HOH . 
J 7 HOH A 22 422 142 HOH HOH . 
J 7 HOH A 23 423 120 HOH HOH . 
J 7 HOH A 24 424 111 HOH HOH . 
J 7 HOH A 25 425 25 HOH HOH . 
J 7 HOH A 26 426 5 HOH HOH . 
J 7 HOH A 27 427 101 HOH HOH . 
J 7 HOH A 28 428 108 HOH HOH . 
J 7 HOH A 29 429 49 HOH HOH . 
J 7 HOH A 30 430 130 HOH HOH . 
J 7 HOH A 31 431 122 HOH HOH . 
J 7 HOH A 32 432 100 HOH HOH . 
J 7 HOH A 33 433 96 HOH HOH . 
J 7 HOH A 34 434 18 HOH HOH . 
J 7 HOH A 35 435 22 HOH HOH . 
J 7 HOH A 36 436 48 HOH HOH . 
J 7 HOH A 37 437 29 HOH HOH . 
J 7 HOH A 38 438 107 HOH HOH . 
J 7 HOH A 39 439 44 HOH HOH . 
J 7 HOH A 40 440 109 HOH HOH . 
J 7 HOH A 41 441 87 HOH HOH . 
J 7 HOH A 42 442 33 HOH HOH . 
J 7 HOH A 43 443 136 HOH HOH . 
J 7 HOH A 44 444 95 HOH HOH . 
J 7 HOH A 45 445 62 HOH HOH . 
J 7 HOH A 46 446 78 HOH HOH . 
J 7 HOH A 47 447 158 HOH HOH . 
J 7 HOH A 48 448 71 HOH HOH . 
J 7 HOH A 49 449 23 HOH HOH . 
J 7 HOH A 50 450 60 HOH HOH . 
J 7 HOH A 51 451 32 HOH HOH . 
J 7 HOH A 52 452 9 HOH HOH . 
J 7 HOH A 53 453 24 HOH HOH . 
J 7 HOH A 54 454 53 HOH HOH . 
J 7 HOH A 55 455 131 HOH HOH . 
J 7 HOH A 56 456 149 HOH HOH . 
J 7 HOH A 57 457 42 HOH HOH . 
J 7 HOH A 58 458 74 HOH HOH . 
J 7 HOH A 59 459 54 HOH HOH . 
J 7 HOH A 60 460 65 HOH HOH . 
J 7 HOH A 61 461 21 HOH HOH . 
J 7 HOH A 62 462 89 HOH HOH . 
J 7 HOH A 63 463 116 HOH HOH . 
J 7 HOH A 64 464 135 HOH HOH . 
J 7 HOH A 65 465 132 HOH HOH . 
J 7 HOH A 66 466 165 HOH HOH . 
K 7 HOH B 1 401 106 HOH HOH . 
K 7 HOH B 2 402 128 HOH HOH . 
K 7 HOH B 3 403 145 HOH HOH . 
K 7 HOH B 4 404 8 HOH HOH . 
K 7 HOH B 5 405 133 HOH HOH . 
K 7 HOH B 6 406 124 HOH HOH . 
K 7 HOH B 7 407 115 HOH HOH . 
K 7 HOH B 8 408 41 HOH HOH . 
K 7 HOH B 9 409 68 HOH HOH . 
K 7 HOH B 10 410 88 HOH HOH . 
K 7 HOH B 11 411 45 HOH HOH . 
K 7 HOH B 12 412 86 HOH HOH . 
K 7 HOH B 13 413 99 HOH HOH . 
K 7 HOH B 14 414 61 HOH HOH . 
K 7 HOH B 15 415 28 HOH HOH . 
K 7 HOH B 16 416 55 HOH HOH . 
K 7 HOH B 17 417 59 HOH HOH . 
K 7 HOH B 18 418 20 HOH HOH . 
K 7 HOH B 19 419 40 HOH HOH . 
K 7 HOH B 20 420 79 HOH HOH . 
K 7 HOH B 21 421 112 HOH HOH . 
K 7 HOH B 22 422 114 HOH HOH . 
K 7 HOH B 23 423 94 HOH HOH . 
K 7 HOH B 24 424 150 HOH HOH . 
K 7 HOH B 25 425 16 HOH HOH . 
K 7 HOH B 26 426 26 HOH HOH . 
K 7 HOH B 27 427 7 HOH HOH . 
K 7 HOH B 28 428 70 HOH HOH . 
K 7 HOH B 29 429 137 HOH HOH . 
K 7 HOH B 30 430 97 HOH HOH . 
K 7 HOH B 31 431 31 HOH HOH . 
K 7 HOH B 32 432 113 HOH HOH . 
K 7 HOH B 33 433 27 HOH HOH . 
K 7 HOH B 34 434 51 HOH HOH . 
K 7 HOH B 35 435 43 HOH HOH . 
K 7 HOH B 36 436 154 HOH HOH . 
K 7 HOH B 37 437 10 HOH HOH . 
K 7 HOH B 38 438 37 HOH HOH . 
K 7 HOH B 39 439 85 HOH HOH . 
K 7 HOH B 40 440 35 HOH HOH . 
K 7 HOH B 41 441 159 HOH HOH . 
K 7 HOH B 42 442 66 HOH HOH . 
K 7 HOH B 43 443 11 HOH HOH . 
K 7 HOH B 44 444 92 HOH HOH . 
K 7 HOH B 45 445 123 HOH HOH . 
K 7 HOH B 46 446 57 HOH HOH . 
K 7 HOH B 47 447 39 HOH HOH . 
K 7 HOH B 48 448 34 HOH HOH . 
K 7 HOH B 49 449 73 HOH HOH . 
K 7 HOH B 50 450 80 HOH HOH . 
K 7 HOH B 51 451 98 HOH HOH . 
K 7 HOH B 52 452 36 HOH HOH . 
K 7 HOH B 53 453 67 HOH HOH . 
K 7 HOH B 54 454 50 HOH HOH . 
K 7 HOH B 55 455 117 HOH HOH . 
K 7 HOH B 56 456 138 HOH HOH . 
K 7 HOH B 57 457 72 HOH HOH . 
K 7 HOH B 58 458 30 HOH HOH . 
K 7 HOH B 59 459 63 HOH HOH . 
K 7 HOH B 60 460 140 HOH HOH . 
K 7 HOH B 61 461 3 HOH HOH . 
K 7 HOH B 62 462 119 HOH HOH . 
K 7 HOH B 63 463 77 HOH HOH . 
K 7 HOH B 64 464 166 HOH HOH . 
K 7 HOH B 65 465 4 HOH HOH . 
K 7 HOH B 66 466 110 HOH HOH . 
K 7 HOH B 67 467 163 HOH HOH . 
K 7 HOH B 68 468 56 HOH HOH . 
K 7 HOH B 69 469 155 HOH HOH . 
K 7 HOH B 70 470 139 HOH HOH . 
K 7 HOH B 71 471 15 HOH HOH . 
K 7 HOH B 72 472 47 HOH HOH . 
K 7 HOH B 73 473 82 HOH HOH . 
K 7 HOH B 74 474 146 HOH HOH . 
K 7 HOH B 75 475 127 HOH HOH . 
K 7 HOH B 76 476 104 HOH HOH . 
K 7 HOH B 77 477 75 HOH HOH . 
K 7 HOH B 78 478 129 HOH HOH . 
K 7 HOH B 79 479 161 HOH HOH . 
K 7 HOH B 80 480 160 HOH HOH . 
K 7 HOH B 81 481 38 HOH HOH . 
K 7 HOH B 82 482 93 HOH HOH . 
K 7 HOH B 83 483 81 HOH HOH . 
K 7 HOH B 84 484 76 HOH HOH . 
K 7 HOH B 85 485 69 HOH HOH . 
K 7 HOH B 86 486 157 HOH HOH . 
K 7 HOH B 87 487 83 HOH HOH . 
K 7 HOH B 88 488 156 HOH HOH . 
K 7 HOH B 89 489 144 HOH HOH . 
K 7 HOH B 90 490 134 HOH HOH . 
K 7 HOH B 91 491 105 HOH HOH . 
K 7 HOH B 92 492 148 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1' HBX . . . E 4 -0.217 89.006 124.775 1 34.99 ? C1' HBX 303 A 1 
HETATM 2 O O1' HBX . . . E 4 0.545 89.01 125.727 1 30.65 ? O1' HBX 303 A 1 
HETATM 3 C C1 HBX . . . E 4 -1.246 90.039 124.537 1 36.57 ? C1 HBX 303 A 1 
HETATM 4 C C2 HBX . . . E 4 -1.394 91.201 125.316 1 35.03 ? C2 HBX 303 A 1 
HETATM 5 C C3 HBX . . . E 4 -2.46 92.082 125.036 1 34.42 ? C3 HBX 303 A 1 
HETATM 6 C C4 HBX . . . E 4 -3.353 91.822 123.998 1 34.44 ? C4 HBX 303 A 1 
HETATM 7 C C5 HBX . . . E 4 -3.179 90.669 123.223 1 36.31 ? C5 HBX 303 A 1 
HETATM 8 C C6 HBX . . . E 4 -2.132 89.785 123.499 1 35.7 ? C6 HBX 303 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#